| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13474592
Identifier: 13474592
GI number: 13474592
Start: 4417421
End: 4418230
Strand: Direct
Name: 13474592
Synonym: mlr5508
Alternate gene names: NA
Gene position: 4417421-4418230 (Clockwise)
Preceding gene: 13474591
Following gene: 13474593
Centisome position: 62.78
GC content: 65.31
Gene sequence:
>810_bases ATGTTCTTCGAATCCAACCGGTCGAGCCGTGACGGCATGATCGCTGTGGGCACCGTGGTGATGAACCGGCTGCGCTCCGG CCAGCATGGCAGCACCATCTGCCAAGTGGTTGGCGAGCCGGGACAGTTCGCGCCGGGCGTCATGACCAGGTCGATGAATT CGCGCGCTATGCCCGATGTCGAGGAAGCGGCCGACGCCGTGCTCAAGGGCGAGCGCAAGGCCAAGCTGAAGAATACGATG TATTTCCACACCGCCGGACTGCGCTTCCCCTACAAGAACATGCACTACACCATGGTCGCCGGCGGCAATGCCTTCTACGA GAAGCGCGGCCGTAACTGGCAGCCGCTGCCGGAGGAGCCAATGGTTGCCTCCGTGGCGCCTGAAACGGTGAAGCCGGCCG CGCCGGTGACGATGGTTGCCTCGGCGGAGCCGGCGCTCACGGCAAAAACATCCCGCACGGCTCCGGCGCAGCGGGTTTAC ATGACCGCCGCTGCGGAACCGGCCCGTCAGCCCAAGACCAGGACCGCCCCGGCACAGGTGACCCCAGTTCAAGAGACCTA CGTGACCGCCGCCGCGGCGCCCGTGGCGAAGTCGGCGCGCGTGACCGTGAAGCCGACAATGGTCGCGATGCAGGAGCCGA TGGAAGAACCGGATGCCGCCCGGTTTGGCGGAACCTTAAACACCCGCGTCATCTCTTCGGTCCAGGGTGCGCCGCAAGAG GCGGCGATGGGGTTCCAGTCGACGCCTGAGAACACCGACGCTATCGGTGCGATGATCGCCAGCCAGTCTCGACCGCTCGA GATCAACTGA
Upstream 100 bases:
>100_bases CATGTCTGTTGCAAGCTTGACCGATGCCATCACGCCGAGTTTCCTGACGTCGCGCGCCTCCAGCCACTCGCCGAAGGACA GGGAGTGTCTGGAGCGGGCA
Downstream 100 bases:
>100_bases TTCGCATTGCCACGGCTTCGCGTGGCAGCATGGCGACCATGCGCGAACGCGGGATGTTCCAAAGCGCTCTGAAAAATCCT AGATCAGAGCAATGTCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Wall-Associated Hydrolase Protein; Hydrolase; Cell Wall Hydrolase Family Protein; Lipoprotein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MFFESNRSSRDGMIAVGTVVMNRLRSGQHGSTICQVVGEPGQFAPGVMTRSMNSRAMPDVEEAADAVLKGERKAKLKNTM YFHTAGLRFPYKNMHYTMVAGGNAFYEKRGRNWQPLPEEPMVASVAPETVKPAAPVTMVASAEPALTAKTSRTAPAQRVY MTAAAEPARQPKTRTAPAQVTPVQETYVTAAAAPVAKSARVTVKPTMVAMQEPMEEPDAARFGGTLNTRVISSVQGAPQE AAMGFQSTPENTDAIGAMIASQSRPLEIN
Sequences:
>Translated_269_residues MFFESNRSSRDGMIAVGTVVMNRLRSGQHGSTICQVVGEPGQFAPGVMTRSMNSRAMPDVEEAADAVLKGERKAKLKNTM YFHTAGLRFPYKNMHYTMVAGGNAFYEKRGRNWQPLPEEPMVASVAPETVKPAAPVTMVASAEPALTAKTSRTAPAQRVY MTAAAEPARQPKTRTAPAQVTPVQETYVTAAAAPVAKSARVTVKPTMVAMQEPMEEPDAARFGGTLNTRVISSVQGAPQE AAMGFQSTPENTDAIGAMIASQSRPLEIN >Mature_269_residues MFFESNRSSRDGMIAVGTVVMNRLRSGQHGSTICQVVGEPGQFAPGVMTRSMNSRAMPDVEEAADAVLKGERKAKLKNTM YFHTAGLRFPYKNMHYTMVAGGNAFYEKRGRNWQPLPEEPMVASVAPETVKPAAPVTMVASAEPALTAKTSRTAPAQRVY MTAAAEPARQPKTRTAPAQVTPVQETYVTAAAAPVAKSARVTVKPTMVAMQEPMEEPDAARFGGTLNTRVISSVQGAPQE AAMGFQSTPENTDAIGAMIASQSRPLEIN
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28833; Mature: 28833
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFESNRSSRDGMIAVGTVVMNRLRSGQHGSTICQVVGEPGQFAPGVMTRSMNSRAMPDV CCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCHHHHCCCCCCCCCH EEAADAVLKGERKAKLKNTMYFHTAGLRFPYKNMHYTMVAGGNAFYEKRGRNWQPLPEEP HHHHHHHHCCHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCC MVASVAPETVKPAAPVTMVASAEPALTAKTSRTAPAQRVYMTAAAEPARQPKTRTAPAQV CEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHEEEEEECCCCCCCCCCCCCCCCC TPVQETYVTAAAAPVAKSARVTVKPTMVAMQEPMEEPDAARFGGTLNTRVISSVQGAPQE CCHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCHH AAMGFQSTPENTDAIGAMIASQSRPLEIN HHCCCCCCCCCHHHHHHHHHCCCCCEECC >Mature Secondary Structure MFFESNRSSRDGMIAVGTVVMNRLRSGQHGSTICQVVGEPGQFAPGVMTRSMNSRAMPDV CCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCHHHHCCCCCCCCCH EEAADAVLKGERKAKLKNTMYFHTAGLRFPYKNMHYTMVAGGNAFYEKRGRNWQPLPEEP HHHHHHHHCCHHHHHHHHEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCC MVASVAPETVKPAAPVTMVASAEPALTAKTSRTAPAQRVYMTAAAEPARQPKTRTAPAQV CEECCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHEEEEEECCCCCCCCCCCCCCCCC TPVQETYVTAAAAPVAKSARVTVKPTMVAMQEPMEEPDAARFGGTLNTRVISSVQGAPQE CCHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCCCCHH AAMGFQSTPENTDAIGAMIASQSRPLEIN HHCCCCCCCCCHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA