| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474588
Identifier: 13474588
GI number: 13474588
Start: 4413591
End: 4414010
Strand: Reverse
Name: 13474588
Synonym: mll5502
Alternate gene names: NA
Gene position: 4414010-4413591 (Counterclockwise)
Preceding gene: 13474600
Following gene: 13474587
Centisome position: 62.73
GC content: 64.05
Gene sequence:
>420_bases ATGCTGCCGGGCCTGAAGGCCGGATTCACGCTGGATGCCCGGCTGGAGGCGGACAGCGAGCAGGTGATGTGGCTTGGGCT GTGCGAATTGCGCGTGATGAACGACCGCCGCTGGCCATGGCTGGTGTTGGTGCCGCAGCGGCCGGGCGCGGAAGAAATCC ACGACATGACGCCGCTCGACCAGGCGATGCTGACCTTCGAAACCAATATGGTGGCGCAGGCGCTGAAGAAAGTCAGCGGC TGCACCAAGATCAACACCGGCGCACTCGGCAATATCGTGCGCCAACTGCATATCCATATCGTCGCTCGGTCCGAAGGCGA TCCCGGCTGGCCCGGCCCGGTGTGGGGGTATGGCCTGCGCGAGCCGTATCAACGTTCCGACCTGCGCCGGTTTGCCGAAA CGATAAGGGCGGCGCTATAA
Upstream 100 bases:
>100_bases GCAAATCGGCGCCATCACAAGAGAGATTCGCTTGCAGGCCCGATGCGGCCGCTCTAGCGTTCATGGTTCGAGGAAACCAA GAAAAGCAAGGGAAACGCCG
Downstream 100 bases:
>100_bases GCCTTCGCCAGTGTTCATCCTAAAAACACGTCCATCCCCAGACATGTCCATCCCAAAGCATCAGAGTCCGCATGAGCTTC CGCCTGTTTGACGCGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MLPGLKAGFTLDARLEADSEQVMWLGLCELRVMNDRRWPWLVLVPQRPGAEEIHDMTPLDQAMLTFETNMVAQALKKVSG CTKINTGALGNIVRQLHIHIVARSEGDPGWPGPVWGYGLREPYQRSDLRRFAETIRAAL
Sequences:
>Translated_139_residues MLPGLKAGFTLDARLEADSEQVMWLGLCELRVMNDRRWPWLVLVPQRPGAEEIHDMTPLDQAMLTFETNMVAQALKKVSG CTKINTGALGNIVRQLHIHIVARSEGDPGWPGPVWGYGLREPYQRSDLRRFAETIRAAL >Mature_139_residues MLPGLKAGFTLDARLEADSEQVMWLGLCELRVMNDRRWPWLVLVPQRPGAEEIHDMTPLDQAMLTFETNMVAQALKKVSG CTKINTGALGNIVRQLHIHIVARSEGDPGWPGPVWGYGLREPYQRSDLRRFAETIRAAL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15664; Mature: 15664
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPGLKAGFTLDARLEADSEQVMWLGLCELRVMNDRRWPWLVLVPQRPGAEEIHDMTPLD CCCCCCCCCEEEEEECCCCCEEEEEEHEEEEEECCCCCCEEEEEECCCCHHHHHHCCCHH QAMLTFETNMVAQALKKVSGCTKINTGALGNIVRQLHIHIVARSEGDPGWPGPVWGYGLR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC EPYQRSDLRRFAETIRAAL CCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLPGLKAGFTLDARLEADSEQVMWLGLCELRVMNDRRWPWLVLVPQRPGAEEIHDMTPLD CCCCCCCCCEEEEEECCCCCEEEEEEHEEEEEECCCCCCEEEEEECCCCHHHHHHCCCHH QAMLTFETNMVAQALKKVSGCTKINTGALGNIVRQLHIHIVARSEGDPGWPGPVWGYGLR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC EPYQRSDLRRFAETIRAAL CCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA