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The map label for this gene is codA [H]

Identifier: 13474471

GI number: 13474471

Start: 4282723

End: 4284003

Strand: Direct

Name: codA [H]

Synonym: mlr5363

Alternate gene names: 13474471

Gene position: 4282723-4284003 (Clockwise)

Preceding gene: 13474469

Following gene: 13474472

Centisome position: 60.87

GC content: 64.64

Gene sequence:

>1281_bases
ATGGATTTCGACCTTATCGTTCGTGGCGGCACGCTGCCGGATGGCAGGATTGCCGATATCGGCATCAGCGGCGAGACGAT
CGCCGCGATCGAGCCCAAATTGCAGGGTTCCGCCCGGACCGAGGTCAATGCCGGCGGGAATCTGGTCTCGCCACCCTTTG
TCGATCCGCATTTCCATATGGATGCCACGCTGTCCTATGGCATTCCGCGCATCAACGCCTCGGGCACGCTGCTGGAAGGC
ATTGCGCTATGGGGTGAGCTGAAGCCGCTTCTGACGCATGAGGCGGTGCGCGACCGGGCGCTGGCCTATTGCGACTGGGC
GGTGTCCATGGGCCTGCTCGCCATCCGCACCCATGTCGACGTCTGCGACGACAGGCTGCTGGCGGTCGAGGCCCTGCTCG
ACGTCAAGAAAACGATCGCGCCCTATATCGACCTGCAGCTCGTGGCCTTTCCTCAGGACGGTTTCTACCGCTCGCCGAAG
GCGCGTGAAAACACCATCCGTGCGCTGGACATGGGCGTCGACATCGTCGGCGGCATTCCGCATTTCGAGCGCAGCATGGC
CGACGGCACGCGCTCGGTGACCGAGCTGTGCGAGATCGCGGCAAAGCGCGGACTGATGGTCGACCTGCATTGCGACGAGA
CCGACGACCCGCTGTCGCGCCACATCGAGCAACTGGCCTATGAAACGCAGCGCCTGGGCCTGCAGGGCAGAGTGGCCGGC
TCGCACCTCACCTCCATGCATTCGATGGACAATTACTATGTCTCGAAGCTTCTGCCGCTGATCGCCGAGGCCGGCGTTTC
CGCCATCCCCAATCCGCTGATCAACATCATGCTTCAGGGTCGCCACGACACCTTCCCGAAGCGCCGCGGCCTGACCCGGG
TCAAGGAGATGCTGGCGCTCGGCATCCGTGTCGGCTGGGGTCAGGATTGCGTGCTCGATCCCTGGTATTCGCTGGGCACC
GCCGACATGCTCGACGTCGCCTTCATGGGCCTGCATGTCGCGCAGATGTCGAGCCCGGCCGACATGGCGCGCTGTTTCGA
CATGGTCACCAACGTCAATGCCGCCATCATGGGACTGGACCATCTCGGCCTCGCCGTCGGCAAGCGCGGCAGCCTCGTCA
TCCTCGCCGCCGGCAATCCCATCGAGGCCCTGCGCCTGCGCGCCGAGCGCATTTGCGTCATCGCCAGGGGCAAGGTGGTG
GCGGAACGGACGCGGCAGGATACGAGGCTTTCCATCCCGGGCAGGCCGCCACTGGTCAACCGCAGGCACAAAGCCACGTA
G

Upstream 100 bases:

>100_bases
GCCGGATGGAACCATTGGCGGCTTCTGGAAAGAAACCGCTGCGTCATGCTGTCTTTTGCGACACGATGGCAAAGTGATTC
TTCAGGCGAGATGACGACAG

Downstream 100 bases:

>100_bases
GCCCAGCCGATTCCCGGTCCTGGTCTCGCGATTTCCCGGATTCTTCTCGTCAAAGCCGCCGCTTGCGTCTACGACGCGAC
TTAAGCGAGGGAGGAATCGG

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MDFDLIVRGGTLPDGRIADIGISGETIAAIEPKLQGSARTEVNAGGNLVSPPFVDPHFHMDATLSYGIPRINASGTLLEG
IALWGELKPLLTHEAVRDRALAYCDWAVSMGLLAIRTHVDVCDDRLLAVEALLDVKKTIAPYIDLQLVAFPQDGFYRSPK
ARENTIRALDMGVDIVGGIPHFERSMADGTRSVTELCEIAAKRGLMVDLHCDETDDPLSRHIEQLAYETQRLGLQGRVAG
SHLTSMHSMDNYYVSKLLPLIAEAGVSAIPNPLINIMLQGRHDTFPKRRGLTRVKEMLALGIRVGWGQDCVLDPWYSLGT
ADMLDVAFMGLHVAQMSSPADMARCFDMVTNVNAAIMGLDHLGLAVGKRGSLVILAAGNPIEALRLRAERICVIARGKVV
AERTRQDTRLSIPGRPPLVNRRHKAT

Sequences:

>Translated_426_residues
MDFDLIVRGGTLPDGRIADIGISGETIAAIEPKLQGSARTEVNAGGNLVSPPFVDPHFHMDATLSYGIPRINASGTLLEG
IALWGELKPLLTHEAVRDRALAYCDWAVSMGLLAIRTHVDVCDDRLLAVEALLDVKKTIAPYIDLQLVAFPQDGFYRSPK
ARENTIRALDMGVDIVGGIPHFERSMADGTRSVTELCEIAAKRGLMVDLHCDETDDPLSRHIEQLAYETQRLGLQGRVAG
SHLTSMHSMDNYYVSKLLPLIAEAGVSAIPNPLINIMLQGRHDTFPKRRGLTRVKEMLALGIRVGWGQDCVLDPWYSLGT
ADMLDVAFMGLHVAQMSSPADMARCFDMVTNVNAAIMGLDHLGLAVGKRGSLVILAAGNPIEALRLRAERICVIARGKVV
AERTRQDTRLSIPGRPPLVNRRHKAT
>Mature_426_residues
MDFDLIVRGGTLPDGRIADIGISGETIAAIEPKLQGSARTEVNAGGNLVSPPFVDPHFHMDATLSYGIPRINASGTLLEG
IALWGELKPLLTHEAVRDRALAYCDWAVSMGLLAIRTHVDVCDDRLLAVEALLDVKKTIAPYIDLQLVAFPQDGFYRSPK
ARENTIRALDMGVDIVGGIPHFERSMADGTRSVTELCEIAAKRGLMVDLHCDETDDPLSRHIEQLAYETQRLGLQGRVAG
SHLTSMHSMDNYYVSKLLPLIAEAGVSAIPNPLINIMLQGRHDTFPKRRGLTRVKEMLALGIRVGWGQDCVLDPWYSLGT
ADMLDVAFMGLHVAQMSSPADMARCFDMVTNVNAAIMGLDHLGLAVGKRGSLVILAAGNPIEALRLRAERICVIARGKVV
AERTRQDTRLSIPGRPPLVNRRHKAT

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=390, Percent_Identity=43.8461538461538, Blast_Score=332, Evalue=4e-92,
Organism=Escherichia coli, GI1786517, Length=398, Percent_Identity=24.3718592964824, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46472; Mature: 46472

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDLIVRGGTLPDGRIADIGISGETIAAIEPKLQGSARTEVNAGGNLVSPPFVDPHFHM
CCCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCC
DATLSYGIPRINASGTLLEGIALWGELKPLLTHEAVRDRALAYCDWAVSMGLLAIRTHVD
CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCDDRLLAVEALLDVKKTIAPYIDLQLVAFPQDGFYRSPKARENTIRALDMGVDIVGGIP
HHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEECCCC
HFERSMADGTRSVTELCEIAAKRGLMVDLHCDETDDPLSRHIEQLAYETQRLGLQGRVAG
HHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEECH
SHLTSMHSMDNYYVSKLLPLIAEAGVSAIPNPLINIMLQGRHDTFPKRRGLTRVKEMLAL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHEEEEECCCCCCCHHHCCHHHHHHHHHH
GIRVGWGQDCVLDPWYSLGTADMLDVAFMGLHVAQMSSPADMARCFDMVTNVNAAIMGLD
HHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEHH
HLGLAVGKRGSLVILAAGNPIEALRLRAERICVIARGKVVAERTRQDTRLSIPGRPPLVN
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCHHHHHCCCCCEEECCCCCCCCC
RRHKAT
CCCCCC
>Mature Secondary Structure
MDFDLIVRGGTLPDGRIADIGISGETIAAIEPKLQGSARTEVNAGGNLVSPPFVDPHFHM
CCCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCC
DATLSYGIPRINASGTLLEGIALWGELKPLLTHEAVRDRALAYCDWAVSMGLLAIRTHVD
CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCDDRLLAVEALLDVKKTIAPYIDLQLVAFPQDGFYRSPKARENTIRALDMGVDIVGGIP
HHCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEECCCC
HFERSMADGTRSVTELCEIAAKRGLMVDLHCDETDDPLSRHIEQLAYETQRLGLQGRVAG
HHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEECH
SHLTSMHSMDNYYVSKLLPLIAEAGVSAIPNPLINIMLQGRHDTFPKRRGLTRVKEMLAL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHEEEEECCCCCCCHHHCCHHHHHHHHHH
GIRVGWGQDCVLDPWYSLGTADMLDVAFMGLHVAQMSSPADMARCFDMVTNVNAAIMGLD
HHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEHH
HLGLAVGKRGSLVILAAGNPIEALRLRAERICVIARGKVVAERTRQDTRLSIPGRPPLVN
HHHHHCCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCHHHHHCCCCCEEECCCCCCCCC
RRHKAT
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]