Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474302

Identifier: 13474302

GI number: 13474302

Start: 4093988

End: 4094395

Strand: Direct

Name: 13474302

Synonym: mlr5159

Alternate gene names: NA

Gene position: 4093988-4094395 (Clockwise)

Preceding gene: 13474300

Following gene: 13474303

Centisome position: 58.19

GC content: 62.5

Gene sequence:

>408_bases
ATGTTCGATACGAAATTTGCAATCGTCTTGCGGGAAGACTTGCCCGTCTGGCAGAAACTCAACGTCACCGCTTTCCTGAC
CAGCGGCATCGTCGCGCAGTTTCCCGACATCATCGGCGACCCCTATCGCGACCGCTCGGGCAATCTCTACAATCCGCTGT
CGATACAGCCGGTCATCGTGCTGTCGGCAGACCAGGCGACGCTGGCCGCGATCCACCGGCGCGCGCTGGAGCGCGGCGTG
ACGACCTCGCTCTATGTCGAGGAGATGTTTTCGACCGGCTTCGACGCCGCCAACCGCGCCGTCTTTGCGCAATTCGCGCC
GGAAGACGCCAAGGTGGTCGGCATCGCGCTGCGTGCCGAGAAGAAGGTGGTCGACAAGATCACCAAGGGCGCCCGCATGC
AGGCATAG

Upstream 100 bases:

>100_bases
ACAAACGTCCAAGACCCCTAGAGGCCTGGCGGTCTAGTTCGAACGACATCGTCTCATTCAGCCTCGCAATTGGGGCCTAA
CCTCGAATGGTCTTTTTCTC

Downstream 100 bases:

>100_bases
CGTGGGAGGCTTGGACTAAGCCTGGCAGCTTCTATTGTTGTGCCAGCGAGCTCATGTGCGCGGCTGCGGCCGACAATTGG
CTTGCCGGCAAGCGGCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MFDTKFAIVLREDLPVWQKLNVTAFLTSGIVAQFPDIIGDPYRDRSGNLYNPLSIQPVIVLSADQATLAAIHRRALERGV
TTSLYVEEMFSTGFDAANRAVFAQFAPEDAKVVGIALRAEKKVVDKITKGARMQA

Sequences:

>Translated_135_residues
MFDTKFAIVLREDLPVWQKLNVTAFLTSGIVAQFPDIIGDPYRDRSGNLYNPLSIQPVIVLSADQATLAAIHRRALERGV
TTSLYVEEMFSTGFDAANRAVFAQFAPEDAKVVGIALRAEKKVVDKITKGARMQA
>Mature_135_residues
MFDTKFAIVLREDLPVWQKLNVTAFLTSGIVAQFPDIIGDPYRDRSGNLYNPLSIQPVIVLSADQATLAAIHRRALERGV
TTSLYVEEMFSTGFDAANRAVFAQFAPEDAKVVGIALRAEKKVVDKITKGARMQA

Specific function: Unknown

COG id: COG4954

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14885; Mature: 14885

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDTKFAIVLREDLPVWQKLNVTAFLTSGIVAQFPDIIGDPYRDRSGNLYNPLSIQPVIV
CCCCEEEEEEECCCCCHHHCCCEEHHHHCHHHHCHHHHCCCCCCCCCCCCCCCCCCEEEE
LSADQATLAAIHRRALERGVTTSLYVEEMFSTGFDAANRAVFAQFAPEDAKVVGIALRAE
EECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEHHH
KKVVDKITKGARMQA
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDTKFAIVLREDLPVWQKLNVTAFLTSGIVAQFPDIIGDPYRDRSGNLYNPLSIQPVIV
CCCCEEEEEEECCCCCHHHCCCEEHHHHCHHHHCHHHHCCCCCCCCCCCCCCCCCCEEEE
LSADQATLAAIHRRALERGVTTSLYVEEMFSTGFDAANRAVFAQFAPEDAKVVGIALRAE
EECCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEHHH
KKVVDKITKGARMQA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA