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The map label for this gene is yaeJ [C]

Identifier: 13474251

GI number: 13474251

Start: 4040659

End: 4041096

Strand: Direct

Name: yaeJ [C]

Synonym: mlr5097

Alternate gene names: 13474251

Gene position: 4040659-4041096 (Clockwise)

Preceding gene: 13474250

Following gene: 13474252

Centisome position: 57.43

GC content: 70.09

Gene sequence:

>438_bases
ATGCCGATCGACGACAACATCATCATCGCGGACGAAGCCGTGATCCATCCCGGCGACCTGCACGAGGATTTCATCCGCTC
GTCGGGCCCCGGTGGCCAGAACGTCAACAAGGTGGCGACCGCCGTGCAGCTGCGCTTCGACGCGGCCAACGCGGCAGGCC
TGTCGGAACGCGTGCGTGCCCGCACGATCAAGCTTGCCGGCCAGCGCGCCACCAAGGACGGCGTCATCGTCATCGAGGCC
GGGCGCTTCCGCACCCAGGAGCAGAACCGGGCGGACGCCCGGGCGAGGCTCACGGCGCTTGTCGCCAAGGCCGCCGAACC
GCCGCCGCCGCCCCGCAAGAAGACTAGGCCCTCGAAAGGCGCGGTGGAGCGGCGGCTGAAGAGCAAGGCCGGACGCGGCA
CGATCAAGAAGCTGCGCGGCCGCGTCGGCGACGACTGA

Upstream 100 bases:

>100_bases
GCAGGAAGCGGCGGAGTAGCCACCACGCCGCTCGGCACCATTGAAGGCCCGGTTTCGATCGGGCCTTTTCTTTTTCGCGC
CGCCGCGCCATGACTGCGGC

Downstream 100 bases:

>100_bases
TCCGTCAGCCGGAGCGTTTTCGGGTCGTTGTCAGCGCCTCCGTGTGGCATTCTTCAAGGTCAACGCAGCAACCGGATTGT
CAACCGACCTCATGCTCGTT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPIDDNIIIADEAVIHPGDLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRARTIKLAGQRATKDGVIVIEA
GRFRTQEQNRADARARLTALVAKAAEPPPPPRKKTRPSKGAVERRLKSKAGRGTIKKLRGRVGDD

Sequences:

>Translated_145_residues
MPIDDNIIIADEAVIHPGDLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRARTIKLAGQRATKDGVIVIEA
GRFRTQEQNRADARARLTALVAKAAEPPPPPRKKTRPSKGAVERRLKSKAGRGTIKKLRGRVGDD
>Mature_144_residues
PIDDNIIIADEAVIHPGDLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRARTIKLAGQRATKDGVIVIEAG
RFRTQEQNRADARARLTALVAKAAEPPPPPRKKTRPSKGAVERRLKSKAGRGTIKKLRGRVGDD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=136, Percent_Identity=41.9117647058824, Blast_Score=100, Evalue=6e-23,
Organism=Drosophila melanogaster, GI19921098, Length=123, Percent_Identity=39.0243902439024, Blast_Score=80, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15632; Mature: 15501

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDDNIIIADEAVIHPGDLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRA
CCCCCCEEEECCCEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHH
RTIKLAGQRATKDGVIVIEAGRFRTQEQNRADARARLTALVAKAAEPPPPPRKKTRPSKG
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
AVERRLKSKAGRGTIKKLRGRVGDD
HHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
PIDDNIIIADEAVIHPGDLHEDFIRSSGPGGQNVNKVATAVQLRFDAANAAGLSERVRA
CCCCCEEEECCCEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHEECCCCCCCHHHHHHH
RTIKLAGQRATKDGVIVIEAGRFRTQEQNRADARARLTALVAKAAEPPPPPRKKTRPSKG
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
AVERRLKSKAGRGTIKKLRGRVGDD
HHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]