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The map label for this gene is rpmI

Identifier: 13474220

GI number: 13474220

Start: 4008213

End: 4008416

Strand: Reverse

Name: rpmI

Synonym: msl5059

Alternate gene names: 13474220

Gene position: 4008416-4008213 (Counterclockwise)

Preceding gene: 13474221

Following gene: 13474219

Centisome position: 56.97

GC content: 54.9

Gene sequence:

>204_bases
ATGCCCAAGATGAAGACCAAGTCGGCCGCCAAGAAGCGGTTCAAGATCACAGGTACGGGTAAAGTCCTGTCGGCTGCGGC
CGGCAAGCGTCACGGCATGATCAAGCGTTCCAACAAGTTCATTCGAAATGCCCGCGGCACGATGGTTCTGGCTGAACCGG
ATGGCAAGAAGGTCATCAAGAATTTTCTGCCGAACGGCCTCTAA

Upstream 100 bases:

>100_bases
CGGCAGGGCATGCCGTGGCGGTTTCATTTGCTTTTCGGGCTTTGGTCGGCCCGGAGCGAACAAGAAGCGCGATAGTGCGC
CAACAATACGGAGTAGCAAA

Downstream 100 bases:

>100_bases
GGCATTCGGTCCGGACACGCAGTAGTTTTACGCAATTCCGAACGGAAAGCCGCAGGCACCTGGGATTGCTTTTAAGGAGA
TCATGACATGGCACGCGTAA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MPKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIKNFLPNGL

Sequences:

>Translated_67_residues
MPKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIKNFLPNGL
>Mature_66_residues
PKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIKNFLPNGL

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_RHILO (Q98CP7)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_105788.1
- ProteinModelPortal:   Q98CP7
- SMR:   Q98CP7
- GeneID:   1228449
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:msl5059
- NMPDR:   fig|266835.1.peg.3892
- HOGENOM:   HBG734125
- OMA:   AHAGKRH
- ProtClustDB:   PRK00172
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7326; Mature: 7195

Theoretical pI: Translated: 12.43; Mature: 12.43

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIK
CCCCCCCCHHHHEEECCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHH
NFLPNGL
HHCCCCC
>Mature Secondary Structure 
PKMKTKSAAKKRFKITGTGKVLSAAAGKRHGMIKRSNKFIRNARGTMVLAEPDGKKVIK
CCCCCCCHHHHEEECCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHH
NFLPNGL
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968