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The map label for this gene is rbsC [H]

Identifier: 13474169

GI number: 13474169

Start: 3959896

End: 3960972

Strand: Reverse

Name: rbsC [H]

Synonym: mll4993

Alternate gene names: 13474169

Gene position: 3960972-3959896 (Counterclockwise)

Preceding gene: 13474170

Following gene: 13474168

Centisome position: 56.3

GC content: 62.21

Gene sequence:

>1077_bases
TTGGCACAGACATCTCATGGCGTCGGAGGGCTCACCTACGATGCGAAGAAGCGCGCCTGGCCCGCCGAATTCAACGTTTT
CCTGGCGCTCGTCATTCTCGTCGTCATCTTCGAAGCGATCGGCCGCATCTTTCTCGGCGACAGTTTCCTGTTCAACACCC
GCAGCGACGTCTCGGGGATCTTCAATGAGGCCCGCCTGCAGATCATCATCCTGCAGGTGTCGATCGTCGGCATCATCGCC
ATCGGCGTGACGCAGGTGATCATTTGCGGCGGCATCGACCTGTCTTCGGGTTCGATCGTCGGCGCCACCGCCATGATCGC
CATGAGTTTCGCCCAGGTGGCGACCGTCAACGGCAATCCCAACCCGAAGGCGATGTTCCTGGCGCAAGGCTGGACCGACC
TGCCCGTCATCGTGCCGCTGCTGGTGGCGATCGGCTGTGGGCTGCTCGCCGGCCTGGTCAATGGCTCTTTGATCGCCTAC
ACGCGCATTCCGCCCTTCATCGCCACGCTTGGCATGATGGTCACCGCGCGCGGCATCGCCAAATGGTGGTCGAAGGGCCA
GCCGATCTCGTTTCCCACCGACAGTTTCGCGGCGATCGGCAAAGGCCTGATGCCAGTCATCATCTTCCTGTCGCTGGCCG
TGCTGTTCCAGCTCATCATGAGCTACACACGCTACGGCAAGCATTGTTACGCGATCGGCTCCAATGAGGACGCCGCGCGC
ATGTCCGGCATCAAGATCGCCAACCACAAGATCCTGGTCTATGTCATCGCTGGCATTCTCGCCTCGCTCGCCGCCGTGGT
GCTCTGCTCCAAGAACCTCACCGCCCAGGCCGGCATGGGCGTGATGTATGAACTCGACGCCATCGCCATGGCGGTCATCG
GCGGCGTCTCGCTGTCGGGCGGCCGCGGCTCGATCGTCGGTACGGTGATCGGCTCGCTGATCTTCGGAGTCATCATCTCC
GGCTTCACCTTCCTGCGCCTCGACGCCTACTACCAGGAGATGGTCAAGGGCGTGATCATCGTCGGTGCGGTCGTTCTCGA
CCAGTGGCGCCAACGCTTGCGGGCATTGAGGGCTTGA

Upstream 100 bases:

>100_bases
ATAGGGAGCGGCGCTGTCGCGCAAAAGACAGCGCCGCTCCCCTTTCCCTCGGCGCCTGACGGCGCTCGAGGTGCGACCGC
GGCTGACGGAGGATAGAAGA

Downstream 100 bases:

>100_bases
CCATGTCAGACATCGTCCTGAAGACCGAAAACCTGACCAAGCGCTATGGCGGCGTGCATGCGCTGGAAGGCGCCAATTTC
GAGCTGCGCAAGGGCGAGCA

Product: sugar (ribose) ABC transporter (permease)

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAQTSHGVGGLTYDAKKRAWPAEFNVFLALVILVVIFEAIGRIFLGDSFLFNTRSDVSGIFNEARLQIIILQVSIVGIIA
IGVTQVIICGGIDLSSGSIVGATAMIAMSFAQVATVNGNPNPKAMFLAQGWTDLPVIVPLLVAIGCGLLAGLVNGSLIAY
TRIPPFIATLGMMVTARGIAKWWSKGQPISFPTDSFAAIGKGLMPVIIFLSLAVLFQLIMSYTRYGKHCYAIGSNEDAAR
MSGIKIANHKILVYVIAGILASLAAVVLCSKNLTAQAGMGVMYELDAIAMAVIGGVSLSGGRGSIVGTVIGSLIFGVIIS
GFTFLRLDAYYQEMVKGVIIVGAVVLDQWRQRLRALRA

Sequences:

>Translated_358_residues
MAQTSHGVGGLTYDAKKRAWPAEFNVFLALVILVVIFEAIGRIFLGDSFLFNTRSDVSGIFNEARLQIIILQVSIVGIIA
IGVTQVIICGGIDLSSGSIVGATAMIAMSFAQVATVNGNPNPKAMFLAQGWTDLPVIVPLLVAIGCGLLAGLVNGSLIAY
TRIPPFIATLGMMVTARGIAKWWSKGQPISFPTDSFAAIGKGLMPVIIFLSLAVLFQLIMSYTRYGKHCYAIGSNEDAAR
MSGIKIANHKILVYVIAGILASLAAVVLCSKNLTAQAGMGVMYELDAIAMAVIGGVSLSGGRGSIVGTVIGSLIFGVIIS
GFTFLRLDAYYQEMVKGVIIVGAVVLDQWRQRLRALRA
>Mature_357_residues
AQTSHGVGGLTYDAKKRAWPAEFNVFLALVILVVIFEAIGRIFLGDSFLFNTRSDVSGIFNEARLQIIILQVSIVGIIAI
GVTQVIICGGIDLSSGSIVGATAMIAMSFAQVATVNGNPNPKAMFLAQGWTDLPVIVPLLVAIGCGLLAGLVNGSLIAYT
RIPPFIATLGMMVTARGIAKWWSKGQPISFPTDSFAAIGKGLMPVIIFLSLAVLFQLIMSYTRYGKHCYAIGSNEDAARM
SGIKIANHKILVYVIAGILASLAAVVLCSKNLTAQAGMGVMYELDAIAMAVIGGVSLSGGRGSIVGTVIGSLIFGVIISG
FTFLRLDAYYQEMVKGVIIVGAVVLDQWRQRLRALRA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=361, Percent_Identity=34.9030470914127, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI145693152, Length=206, Percent_Identity=34.9514563106796, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1790524, Length=331, Percent_Identity=32.02416918429, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1788471, Length=291, Percent_Identity=36.426116838488, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788896, Length=279, Percent_Identity=32.9749103942652, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI145693214, Length=292, Percent_Identity=36.3013698630137, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI87082395, Length=303, Percent_Identity=32.6732673267327, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789992, Length=357, Percent_Identity=28.2913165266106, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1787794, Length=341, Percent_Identity=29.6187683284457, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787793, Length=326, Percent_Identity=29.7546012269939, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37834; Mature: 37702

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTSHGVGGLTYDAKKRAWPAEFNVFLALVILVVIFEAIGRIFLGDSFLFNTRSDVSGI
CCCCCCCCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
FNEARLQIIILQVSIVGIIAIGVTQVIICGGIDLSSGSIVGATAMIAMSFAQVATVNGNP
HHHHCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHEEECCCC
NPKAMFLAQGWTDLPVIVPLLVAIGCGLLAGLVNGSLIAYTRIPPFIATLGMMVTARGIA
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHH
KWWSKGQPISFPTDSFAAIGKGLMPVIIFLSLAVLFQLIMSYTRYGKHCYAIGSNEDAAR
HHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
MSGIKIANHKILVYVIAGILASLAAVVLCSKNLTAQAGMGVMYELDAIAMAVIGGVSLSG
HCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEHHHHHHHHHHCCCEECC
GRGSIVGTVIGSLIFGVIISGFTFLRLDAYYQEMVKGVIIVGAVVLDQWRQRLRALRA
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQTSHGVGGLTYDAKKRAWPAEFNVFLALVILVVIFEAIGRIFLGDSFLFNTRSDVSGI
CCCCCCCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHH
FNEARLQIIILQVSIVGIIAIGVTQVIICGGIDLSSGSIVGATAMIAMSFAQVATVNGNP
HHHHCEEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHEEECCCC
NPKAMFLAQGWTDLPVIVPLLVAIGCGLLAGLVNGSLIAYTRIPPFIATLGMMVTARGIA
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHH
KWWSKGQPISFPTDSFAAIGKGLMPVIIFLSLAVLFQLIMSYTRYGKHCYAIGSNEDAAR
HHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
MSGIKIANHKILVYVIAGILASLAAVVLCSKNLTAQAGMGVMYELDAIAMAVIGGVSLSG
HCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEHHHHHHHHHHCCCEECC
GRGSIVGTVIGSLIFGVIISGFTFLRLDAYYQEMVKGVIIVGAVVLDQWRQRLRALRA
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]