Click here to switch to the map view.

The map label for this gene is yfhH [C]

Identifier: 13474161

GI number: 13474161

Start: 3952059

End: 3952904

Strand: Reverse

Name: yfhH [C]

Synonym: mll4983

Alternate gene names: 13474161

Gene position: 3952904-3952059 (Counterclockwise)

Preceding gene: 13474163

Following gene: 13474160

Centisome position: 56.18

GC content: 66.78

Gene sequence:

>846_bases
ATGGACGAACGGGTACCTCGCGACTTCGAGACGCTGCGCGCCACCATCCTGGACCGGCGCGAAAGCCTGCCCAAGCGCAT
CGCCCAGATCGCCGCCTACGCGCTCGACAATCCCGACGACATCGCCTTCGGTACCGCCGCCAGCATCGCCGCCTCGGCCG
GCGTGCAGCCCTCCACCCTGATCCGCTTTGCCCAGCAGCTCGGCTTCGACGGCTTCACCAGCCTGCAGCAGGTGTTCCGC
GAGCGGCTGCGCGAGCGCAACTCATCCTATGACGAGCGGCTGCAGGCGCTGCGCGCCAAGGCCGAGGGCGGCGCCGGTCA
CCGCGCGATCTTCGACGGCTTCGTCGCCGCCGCCAGCACCTCGCTCAACGACATTTCGCGCACGCTGGACGATGCGCATC
TGGAAGAGGCGATTTCGCTGCTGGCAAAGGCGCAGACCATTTATGTCTTAGCCAAGCGGCGCTCCTATCCGGTGGCGACC
TATATCGCCTATGCGCTGGGCAAGCTGAAGATCCGCAACCAGCTGATCGAATCGGCCGCCGGCCTGAACGCCGAGATGAT
CGCCTTCGCCACGCCGGCGGACGCCGTCATCGCCATCTCCTTCTCGCCCTATGCGCCGGCCACCATCGAGGAAGCACGCA
CCATTTCGGAACAGGGCGTGCCGATCGTCGCCATCACCGACAGTTCGTTTTCGCCGCTCGCCCAGTTCGCCAGGGTCTGG
TTCGAGGTTGCCGAGGCGGATTTCGCCGGCTTCCGTTCGCTGTCGGCGACGATGGCCCTGGCCATGGCGTTGACCGTTGG
CGTCGGCGAGAAGCGGCGCGATACCGCCCGCAGGCGCAAAGCCTGA

Upstream 100 bases:

>100_bases
CCAAATGGAATGTCTGCCTCATTTTTTATGGCGTTCTTGCGCAGGCTCGCTATGATGGGGCAGAGAGGACGTTTCACGGA
TGAGCTTGGACGGGCCGACG

Downstream 100 bases:

>100_bases
TCGGGCACCTAAAAGCCAATTTTAGATCCGGGAATGCTCATTCCATATTGACTATGGATTGGAATTATTATTTCATATTC
CCGGCACCACGCTGCCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Domain-Containing Protein; Transcriptional Regulator Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; SIS Family Regulator; Transcription Regulator Protein; Transcriptional Regulator RpiR Family Protein; RpiR-Family Transcriptional Regulator; Conserved Hypothethical Protein; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Bifunctional Protein Glk; Transcriptional Regulator IolR; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; Transcriptional Regulator Family Protein; RpiR Family Transcription Regulator Protein; HTH/SIS Domain-Containing Protein; Sugar Isomerase Family Protein; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDERVPRDFETLRATILDRRESLPKRIAQIAAYALDNPDDIAFGTAASIAASAGVQPSTLIRFAQQLGFDGFTSLQQVFR
ERLRERNSSYDERLQALRAKAEGGAGHRAIFDGFVAAASTSLNDISRTLDDAHLEEAISLLAKAQTIYVLAKRRSYPVAT
YIAYALGKLKIRNQLIESAAGLNAEMIAFATPADAVIAISFSPYAPATIEEARTISEQGVPIVAITDSSFSPLAQFARVW
FEVAEADFAGFRSLSATMALAMALTVGVGEKRRDTARRRKA

Sequences:

>Translated_281_residues
MDERVPRDFETLRATILDRRESLPKRIAQIAAYALDNPDDIAFGTAASIAASAGVQPSTLIRFAQQLGFDGFTSLQQVFR
ERLRERNSSYDERLQALRAKAEGGAGHRAIFDGFVAAASTSLNDISRTLDDAHLEEAISLLAKAQTIYVLAKRRSYPVAT
YIAYALGKLKIRNQLIESAAGLNAEMIAFATPADAVIAISFSPYAPATIEEARTISEQGVPIVAITDSSFSPLAQFARVW
FEVAEADFAGFRSLSATMALAMALTVGVGEKRRDTARRRKA
>Mature_281_residues
MDERVPRDFETLRATILDRRESLPKRIAQIAAYALDNPDDIAFGTAASIAASAGVQPSTLIRFAQQLGFDGFTSLQQVFR
ERLRERNSSYDERLQALRAKAEGGAGHRAIFDGFVAAASTSLNDISRTLDDAHLEEAISLLAKAQTIYVLAKRRSYPVAT
YIAYALGKLKIRNQLIESAAGLNAEMIAFATPADAVIAISFSPYAPATIEEARTISEQGVPIVAITDSSFSPLAQFARVW
FEVAEADFAGFRSLSATMALAMALTVGVGEKRRDTARRRKA

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30565; Mature: 30565

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDERVPRDFETLRATILDRRESLPKRIAQIAAYALDNPDDIAFGTAASIAASAGVQPSTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH
IRFAQQLGFDGFTSLQQVFRERLRERNSSYDERLQALRAKAEGGAGHRAIFDGFVAAAST
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SLNDISRTLDDAHLEEAISLLAKAQTIYVLAKRRSYPVATYIAYALGKLKIRNQLIESAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GLNAEMIAFATPADAVIAISFSPYAPATIEEARTISEQGVPIVAITDSSFSPLAQFARVW
CCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
FEVAEADFAGFRSLSATMALAMALTVGVGEKRRDTARRRKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDERVPRDFETLRATILDRRESLPKRIAQIAAYALDNPDDIAFGTAASIAASAGVQPSTL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH
IRFAQQLGFDGFTSLQQVFRERLRERNSSYDERLQALRAKAEGGAGHRAIFDGFVAAAST
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SLNDISRTLDDAHLEEAISLLAKAQTIYVLAKRRSYPVATYIAYALGKLKIRNQLIESAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GLNAEMIAFATPADAVIAISFSPYAPATIEEARTISEQGVPIVAITDSSFSPLAQFARVW
CCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHH
FEVAEADFAGFRSLSATMALAMALTVGVGEKRRDTARRRKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA