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The map label for this gene is iolB [H]

Identifier: 13474156

GI number: 13474156

Start: 3945707

End: 3946519

Strand: Reverse

Name: iolB [H]

Synonym: mll4976

Alternate gene names: 13474156

Gene position: 3946519-3945707 (Counterclockwise)

Preceding gene: 13474157

Following gene: 13474155

Centisome position: 56.09

GC content: 63.96

Gene sequence:

>813_bases
ATGTCGAAACTGCTCGTCAAAGCCGACAAGGGCCATGGCCGCGTTGCCCATGTGACGCCGAAAAGCGCCGGCTGGACTTA
TGTCGGTTTCGACCTGCATCGGCTGCAACCCGGCGAAAGCGCCTCGGGAAAGACGCAAGACCGCGAAGTCTGCCTGGTGT
TCGTCACCGGCAAGGGCACCGCGACAGCCGGCGGCAAGGATCTCGGCCTGCTCGGCGCGCGTATGTCGCCTTTCGAGGGC
AAGCCGTGGTCGGTCTATGTGCCCGAGGGATCGGACTGGTCGGTGACAGCGGACACCGAATTGGAGCTCGCGGTCTGCTC
GGCCCCCGGCCTTGGCGGCGGACTGCCGGTTCGCGTGATCGGACCCGACGATCTCGGCCAGGAAGTGCGCGGCAAGGGCA
CCAACACGCGCTACGTCACCAACATCCTGCCGGAGGGCAAGCCGGCCGATTCCTTGCTGGTGGTCGAGGTCATCACGCCA
GGCGGCCACACGTCGAGCTATCCGCCGCACAAGCATGACCAGGACAATCTGCCCGCAGAATCCTATCTCGAGGAGACCTA
TTACCACCGCCTCAACCCGCCGCAGGGCTTTGCCTTCCAGCGCGTCTACACTGATGCGGACACGAATGGCCATCGCGCGC
TCGACGAAGCCATGGCGATCGAGGATGGCGATGTCGTGCTGGTGCCCAGGGGTTATCACCCCTGCGCCGCCTGCCATGGC
TACGATCTCTACTATCTCAACGTCATGGCCGGGCCGAAGCGGACGTGGAAATTCCACAATGCGCCCGAGCACGAATGGTT
GATGAAGGCCTGA

Upstream 100 bases:

>100_bases
ACGAAGTTGGAGGGCGCCGGTCGAAGATTTTGCGATGGCCCTTTCAAACAGACGGCTTGGCTTCACGGAGCCCTTCGAGC
CAACGGAATAGGAGACAAAA

Downstream 100 bases:

>100_bases
CCGGTCCGAGATTCCTCCTGAACCTGTTGGTCCAGCTCGGAAAAATCGTCGGCTAAGGACCTATTGGGTCGATTTGCCTT
CGAAAACCCTTCAAAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSKLLVKADKGHGRVAHVTPKSAGWTYVGFDLHRLQPGESASGKTQDREVCLVFVTGKGTATAGGKDLGLLGARMSPFEG
KPWSVYVPEGSDWSVTADTELELAVCSAPGLGGGLPVRVIGPDDLGQEVRGKGTNTRYVTNILPEGKPADSLLVVEVITP
GGHTSSYPPHKHDQDNLPAESYLEETYYHRLNPPQGFAFQRVYTDADTNGHRALDEAMAIEDGDVVLVPRGYHPCAACHG
YDLYYLNVMAGPKRTWKFHNAPEHEWLMKA

Sequences:

>Translated_270_residues
MSKLLVKADKGHGRVAHVTPKSAGWTYVGFDLHRLQPGESASGKTQDREVCLVFVTGKGTATAGGKDLGLLGARMSPFEG
KPWSVYVPEGSDWSVTADTELELAVCSAPGLGGGLPVRVIGPDDLGQEVRGKGTNTRYVTNILPEGKPADSLLVVEVITP
GGHTSSYPPHKHDQDNLPAESYLEETYYHRLNPPQGFAFQRVYTDADTNGHRALDEAMAIEDGDVVLVPRGYHPCAACHG
YDLYYLNVMAGPKRTWKFHNAPEHEWLMKA
>Mature_269_residues
SKLLVKADKGHGRVAHVTPKSAGWTYVGFDLHRLQPGESASGKTQDREVCLVFVTGKGTATAGGKDLGLLGARMSPFEGK
PWSVYVPEGSDWSVTADTELELAVCSAPGLGGGLPVRVIGPDDLGQEVRGKGTNTRYVTNILPEGKPADSLLVVEVITPG
GHTSSYPPHKHDQDNLPAESYLEETYYHRLNPPQGFAFQRVYTDADTNGHRALDEAMAIEDGDVVLVPRGYHPCAACHGY
DLYYLNVMAGPKRTWKFHNAPEHEWLMKA

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29337; Mature: 29206

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLLVKADKGHGRVAHVTPKSAGWTYVGFDLHRLQPGESASGKTQDREVCLVFVTGKGT
CCCEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC
ATAGGKDLGLLGARMSPFEGKPWSVYVPEGSDWSVTADTELELAVCSAPGLGGGLPVRVI
CCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEE
GPDDLGQEVRGKGTNTRYVTNILPEGKPADSLLVVEVITPGGHTSSYPPHKHDQDNLPAE
CCCCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH
SYLEETYYHRLNPPQGFAFQRVYTDADTNGHRALDEAMAIEDGDVVLVPRGYHPCAACHG
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHEECCCCEEEEECCCCCCHHHCC
YDLYYLNVMAGPKRTWKFHNAPEHEWLMKA
CEEEEEEEECCCCCEEEECCCCCCCEEECC
>Mature Secondary Structure 
SKLLVKADKGHGRVAHVTPKSAGWTYVGFDLHRLQPGESASGKTQDREVCLVFVTGKGT
CCEEEEECCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCC
ATAGGKDLGLLGARMSPFEGKPWSVYVPEGSDWSVTADTELELAVCSAPGLGGGLPVRVI
CCCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEE
GPDDLGQEVRGKGTNTRYVTNILPEGKPADSLLVVEVITPGGHTSSYPPHKHDQDNLPAE
CCCCCCHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH
SYLEETYYHRLNPPQGFAFQRVYTDADTNGHRALDEAMAIEDGDVVLVPRGYHPCAACHG
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHEECCCCEEEEECCCCCCHHHCC
YDLYYLNVMAGPKRTWKFHNAPEHEWLMKA
CEEEEEEEECCCCCEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA