Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yhcW [H]

Identifier: 13474120

GI number: 13474120

Start: 3914722

End: 3915354

Strand: Direct

Name: yhcW [H]

Synonym: mlr4932

Alternate gene names: 13474120

Gene position: 3914722-3915354 (Clockwise)

Preceding gene: 13474118

Following gene: 13474129

Centisome position: 55.64

GC content: 63.67

Gene sequence:

>633_bases
ATGACACCGAAGGCGGTTTTCTGGGACATGGACGGTACGCTGGTCGACAGCGAGCCGTTGCACGAAGCAGCCCTCGTGGC
GGCGATGCGCAATGTCGGCCTCAAGCCGCCCGCCGACCTGCATGAGCGCGTGCTCGGCGTCGCCGCCTGGCCGGTCTACG
AAATGATGCGCGACGAGTTCGGCCTCGATCTTCCCTTCGACGACTGGATCATGCGCAAATACGAGCACTATCTGCCGCTG
GTGGAGGGGCTGAAACCGCGTCCTGGCGCTATAGAAGTCTTCAATGAATTGCGCGCGCTTGGCGTGCAGCAAGCGGTGGT
CTCGAATTCAGACCGGATGATCGTCGACGCCAATCTGCGCATGGTCGGCCTCTTTTATCCAGGCATGAAAACGATCAGCC
GCAACGACGTGCGTGATGGCAAGCCGCACGCCGAACCTTTCCTGCGCGCCGCGTACCTGGCCGATGTCGATCCCGCGCAC
GCCGTGGCGGTCGACGACAGCTGGCCGGGCGCCATGGCGGGTCTGGCGGCGGGCATGAAGACGATCTTCTGGCCGGAAAA
GCCGATGGAAGGCCCGCCTGGCGCCATCGTCATCAACAGCGCCGAGGAATTGCGGGCTCAGCTCGGGCTCTAA

Upstream 100 bases:

>100_bases
AGGCGGAGCGGCTTCGCTTCCAGTCGCGGGCATCTTCTGTGATCCCGACGGTTTATCTCCCGGCGCAAACCCTTTAAGGG
GATCGCAAAAGGAGCGCTGC

Downstream 100 bases:

>100_bases
TTCCGGTAGATCGGCTCTTCCTCGTCGAGGATCGCCTTCAACTCGGCGAGATGGCGTTCGGCCTGGCCGGGATAGTCGTC
CATTTCGCTCGCCGTCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTPKAVFWDMDGTLVDSEPLHEAALVAAMRNVGLKPPADLHERVLGVAAWPVYEMMRDEFGLDLPFDDWIMRKYEHYLPL
VEGLKPRPGAIEVFNELRALGVQQAVVSNSDRMIVDANLRMVGLFYPGMKTISRNDVRDGKPHAEPFLRAAYLADVDPAH
AVAVDDSWPGAMAGLAAGMKTIFWPEKPMEGPPGAIVINSAEELRAQLGL

Sequences:

>Translated_210_residues
MTPKAVFWDMDGTLVDSEPLHEAALVAAMRNVGLKPPADLHERVLGVAAWPVYEMMRDEFGLDLPFDDWIMRKYEHYLPL
VEGLKPRPGAIEVFNELRALGVQQAVVSNSDRMIVDANLRMVGLFYPGMKTISRNDVRDGKPHAEPFLRAAYLADVDPAH
AVAVDDSWPGAMAGLAAGMKTIFWPEKPMEGPPGAIVINSAEELRAQLGL
>Mature_209_residues
TPKAVFWDMDGTLVDSEPLHEAALVAAMRNVGLKPPADLHERVLGVAAWPVYEMMRDEFGLDLPFDDWIMRKYEHYLPLV
EGLKPRPGAIEVFNELRALGVQQAVVSNSDRMIVDANLRMVGLFYPGMKTISRNDVRDGKPHAEPFLRAAYLADVDPAHA
VAVDDSWPGAMAGLAAGMKTIFWPEKPMEGPPGAIVINSAEELRAQLGL

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1790151, Length=198, Percent_Identity=28.2828282828283, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87082080, Length=188, Percent_Identity=30.3191489361702, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 23161; Mature: 23030

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKAVFWDMDGTLVDSEPLHEAALVAAMRNVGLKPPADLHERVLGVAAWPVYEMMRDEF
CCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GLDLPFDDWIMRKYEHYLPLVEGLKPRPGAIEVFNELRALGVQQAVVSNSDRMIVDANLR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCE
MVGLFYPGMKTISRNDVRDGKPHAEPFLRAAYLADVDPAHAVAVDDSWPGAMAGLAAGMK
EEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH
TIFWPEKPMEGPPGAIVINSAEELRAQLGL
HHCCCCCCCCCCCCEEEECCHHHHHHHHCC
>Mature Secondary Structure 
TPKAVFWDMDGTLVDSEPLHEAALVAAMRNVGLKPPADLHERVLGVAAWPVYEMMRDEF
CCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GLDLPFDDWIMRKYEHYLPLVEGLKPRPGAIEVFNELRALGVQQAVVSNSDRMIVDANLR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCE
MVGLFYPGMKTISRNDVRDGKPHAEPFLRAAYLADVDPAHAVAVDDSWPGAMAGLAAGMK
EEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH
TIFWPEKPMEGPPGAIVINSAEELRAQLGL
HHCCCCCCCCCCCCEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]