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The map label for this gene is cycY [H]

Identifier: 13474101

GI number: 13474101

Start: 3894735

End: 3895085

Strand: Direct

Name: cycY [H]

Synonym: mlr4905

Alternate gene names: 13474101

Gene position: 3894735-3895085 (Clockwise)

Preceding gene: 13474100

Following gene: 13474103

Centisome position: 55.35

GC content: 60.68

Gene sequence:

>351_bases
TTGACTGCTGCCCGGGCGGCATCTGTCGCCCTGCCTAAGGGAGATGCCATCAGCGGGCGTGGGTATTTCGAGGACCGTTG
CACCGGCTGCCATTCGATTGTCCGAAACGGCTTCGGCCCTCGCCTTGGCGATGTCTACGGCAGACGCGTGGGATCAGTTG
CCGGATTTCAATACAGCCAGGCGCTGCGGCAAAAGCGATTCGTCTGGTCGGAAAAGTCGCTCGACAGCTGGCTGTCCGGC
CCCGGGCAATTCCTGCCCGGGACGCGGATGGGCATCTCGATAGCAGATCAGCAAATCCGCGCGGATATCATCGCCTATCT
CAAATCTCATCCGTCCGGACAGGACGAATGA

Upstream 100 bases:

>100_bases
CGATATATCTTTACCTTCTTTCCTTGCGCGCAATCTTGGAAGTGCCGTGGGCTGGTCTGCCGCGTTTGCGGTTCTGCTGC
TGGCCACCGCTGCGCCAGTA

Downstream 100 bases:

>100_bases
AGCGCGCGACGGCTTTCCCGTCTCAATGCCCGAACGCCAGCGGTGGTGCGATCCGGTCGCGGCGCAGCCAGCGCGTCAGG
AGCAGCGCCGCCACCACGGC

Product: cytochrome c-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTAARAASVALPKGDAISGRGYFEDRCTGCHSIVRNGFGPRLGDVYGRRVGSVAGFQYSQALRQKRFVWSEKSLDSWLSG
PGQFLPGTRMGISIADQQIRADIIAYLKSHPSGQDE

Sequences:

>Translated_116_residues
MTAARAASVALPKGDAISGRGYFEDRCTGCHSIVRNGFGPRLGDVYGRRVGSVAGFQYSQALRQKRFVWSEKSLDSWLSG
PGQFLPGTRMGISIADQQIRADIIAYLKSHPSGQDE
>Mature_115_residues
TAARAASVALPKGDAISGRGYFEDRCTGCHSIVRNGFGPRLGDVYGRRVGSVAGFQYSQALRQKRFVWSEKSLDSWLSGP
GQFLPGTRMGISIADQQIRADIIAYLKSHPSGQDE

Specific function: Electron transfer pathways that operates during photosynthesis [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11128019, Length=100, Percent_Identity=36, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17566554, Length=104, Percent_Identity=39.4230769230769, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=103, Percent_Identity=37.8640776699029, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320796, Length=104, Percent_Identity=33.6538461538462, Blast_Score=76, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322508, Length=99, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137204, Length=103, Percent_Identity=40.7766990291262, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17137228, Length=105, Percent_Identity=37.1428571428571, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12607; Mature: 12476

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS51007 CYTC ; PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAARAASVALPKGDAISGRGYFEDRCTGCHSIVRNGFGPRLGDVYGRRVGSVAGFQYSQ
CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ALRQKRFVWSEKSLDSWLSGPGQFLPGTRMGISIADQQIRADIIAYLKSHPSGQDE
HHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TAARAASVALPKGDAISGRGYFEDRCTGCHSIVRNGFGPRLGDVYGRRVGSVAGFQYSQ
CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ALRQKRFVWSEKSLDSWLSGPGQFLPGTRMGISIADQQIRADIIAYLKSHPSGQDE
HHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8385603 [H]