Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474091

Identifier: 13474091

GI number: 13474091

Start: 3883563

End: 3884885

Strand: Reverse

Name: 13474091

Synonym: mll4889

Alternate gene names: NA

Gene position: 3884885-3883563 (Counterclockwise)

Preceding gene: 13474092

Following gene: 13474090

Centisome position: 55.21

GC content: 64.17

Gene sequence:

>1323_bases
ATGGCTGACAAGAACGGATTTTTCGACCTCTCCAAGACTGGCCTCATCTCCAAGACTGGCCTTACCCGCCGCACGGCTCT
GAAGGGCCTGGCGGCGACCGCCGGCCTCGCCGTGGCGCCCGGTTTCGTCCGCTATTCCCAGGCGCAGAGCTCGGCGCCGA
TCAAGATCGGCTTCCAGTCGCACCGCACCGGCATCGGCGCCGCCTATGGCCGCTGGTACGAGAAGACCACCGCTGCCGCC
GTCAAGGCGATCAACGCCGCCGGCGGCATCAACGGCCGTCCGGTCGAGGTCATCATCGAGGATGACGGCACCGATCCCGG
CCGTGGTGCGGAAGTGGTCGGCAAGTTCGCCACCCAGCACAAGACCGACATCGTCTTCGGCACGCTGTTCTCGCATGTCG
TCATCGGCTCGGCGCCTGCCGCCGGCGAGGCCAAGATCCCCTACTTCGTCGTCAGCGAAGGCCACCACGTCGCCTCGACC
AAGCTCAATCGCTATGTCTTCCAGCCCGGCATCACCGACGTGAAGAGCCAGATCCAGTCGATGGCGCCGTGGATCGCGGC
CAATGCCGGCAAGAAGGTGACGCAGATCTTCCCCGATTTCGCCTTCGGCTACGATCACCGCGACTACCTGCCGCCGGCGC
TGAAGGCGCAAGGCGCCGACGTCATCGCGCAGATCGCCATCCCGCCTACGGAATCCTCCTTCACCAAATATTTTCCGCAG
ATCCCGCCGGAGACCGAGGTGATCTACCACGTCATGGTCGGCCCGGCGGTGCTTACCTTCGTCAAGGAACTCGGCGAGTT
CTACGGCTCCAACCGGCCGCAGCTGTTCGGCTTCATGGATTCGCTGGAAGCCACCGACATCAACAGCCCCGGGCTGGAAT
TCCTGGATGGCAGCCATTTCTGGGAGGGTTCGCCGCGCTATGCGCAGGCCGATGACAGCGCCGCGCAAAAAGCCTATCGC
GCCGCCGTCGGCATCGACGACAATGGCGCGGCCGTCGGCGATCCCAAGGACGTCTCCACCGCGTCGCACATGTTCGGCTG
CTGGGAGACGCTCTATGTCGTCAAGAAGGCCATGGAAGACGCCGGCTACAAGGGCCCGGAAGACCGCGCCAAGCTGGTCG
AGGCAACCGAGGCGCTGACCGCCTTTGCCGAAGGGCCCGAGCATCCGCAGGGCGCGAAAACCTTCAACGGCAAGATCCAC
CAGTGCTTCGGCATACAGAACATCTCCAAGGTCGAAGGCGGCAAGCTGAAGGTGGTGCACAAGACCAAGATCGAGGACGG
GCTTTACGAAGCCGAGGGCGATTACACGACGCAGGCGCTGTGA

Upstream 100 bases:

>100_bases
GGTGATTTAGTTTGTACACATGCAATTTTCCGCATCCTCCGAGCGAGGATGCCGAACCCGCCTTATCGTTGGTCAAGACT
GAAAAAACAGGGGAACGAAC

Downstream 100 bases:

>100_bases
GGCCTCACCCTCCCCCTTGTGGGGAGGGTCGGCGAACAGGCTTCGCATTTGCGAAGCCGGTGAGACGGGGTGGGGGCTGC
GACGGCCCATGCCCCACCCC

Product: branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQSHRTGIGAAYGRWYEKTTAAA
VKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQHKTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVAST
KLNRYVFQPGITDVKSQIQSMAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ
IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHFWEGSPRYAQADDSAAQKAYR
AAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMEDAGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIH
QCFGIQNISKVEGGKLKVVHKTKIEDGLYEAEGDYTTQAL

Sequences:

>Translated_440_residues
MADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQSHRTGIGAAYGRWYEKTTAAA
VKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQHKTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVAST
KLNRYVFQPGITDVKSQIQSMAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ
IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHFWEGSPRYAQADDSAAQKAYR
AAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMEDAGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIH
QCFGIQNISKVEGGKLKVVHKTKIEDGLYEAEGDYTTQAL
>Mature_439_residues
ADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQSHRTGIGAAYGRWYEKTTAAAV
KAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQHKTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVASTK
LNRYVFQPGITDVKSQIQSMAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQI
PPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHFWEGSPRYAQADDSAAQKAYRA
AVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMEDAGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIHQ
CFGIQNISKVEGGKLKVVHKTKIEDGLYEAEGDYTTQAL

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47133; Mature: 47001

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQS
CCCCCCCEECCCCCCEECCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCCEEEECCC
HRTGIGAAYGRWYEKTTAAAVKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQH
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC
KTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVASTKLNRYVFQPGITDVKSQIQS
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEHHHHHHHEEECCCHHHHHHHHHH
MAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ
HCCHHHCCCCCHHHHHCCHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHCCC
IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHF
CCCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCHHCCCCCC
WEGSPRYAQADDSAAQKAYRAAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMED
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIHQCFGIQNISKVEGGKLKVVH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
KTKIEDGLYEAEGDYTTQAL
ECCCCCCCEECCCCEECCCC
>Mature Secondary Structure 
ADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQS
CCCCCCEECCCCCCEECCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCCEEEECCC
HRTGIGAAYGRWYEKTTAAAVKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQH
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC
KTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVASTKLNRYVFQPGITDVKSQIQS
CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEHHHHHHHEEECCCHHHHHHHHHH
MAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ
HCCHHHCCCCCHHHHHCCHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHCCC
IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHF
CCCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCHHCCCCCC
WEGSPRYAQADDSAAQKAYRAAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMED
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIHQCFGIQNISKVEGGKLKVVH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
KTKIEDGLYEAEGDYTTQAL
ECCCCCCCEECCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA