| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474091
Identifier: 13474091
GI number: 13474091
Start: 3883563
End: 3884885
Strand: Reverse
Name: 13474091
Synonym: mll4889
Alternate gene names: NA
Gene position: 3884885-3883563 (Counterclockwise)
Preceding gene: 13474092
Following gene: 13474090
Centisome position: 55.21
GC content: 64.17
Gene sequence:
>1323_bases ATGGCTGACAAGAACGGATTTTTCGACCTCTCCAAGACTGGCCTCATCTCCAAGACTGGCCTTACCCGCCGCACGGCTCT GAAGGGCCTGGCGGCGACCGCCGGCCTCGCCGTGGCGCCCGGTTTCGTCCGCTATTCCCAGGCGCAGAGCTCGGCGCCGA TCAAGATCGGCTTCCAGTCGCACCGCACCGGCATCGGCGCCGCCTATGGCCGCTGGTACGAGAAGACCACCGCTGCCGCC GTCAAGGCGATCAACGCCGCCGGCGGCATCAACGGCCGTCCGGTCGAGGTCATCATCGAGGATGACGGCACCGATCCCGG CCGTGGTGCGGAAGTGGTCGGCAAGTTCGCCACCCAGCACAAGACCGACATCGTCTTCGGCACGCTGTTCTCGCATGTCG TCATCGGCTCGGCGCCTGCCGCCGGCGAGGCCAAGATCCCCTACTTCGTCGTCAGCGAAGGCCACCACGTCGCCTCGACC AAGCTCAATCGCTATGTCTTCCAGCCCGGCATCACCGACGTGAAGAGCCAGATCCAGTCGATGGCGCCGTGGATCGCGGC CAATGCCGGCAAGAAGGTGACGCAGATCTTCCCCGATTTCGCCTTCGGCTACGATCACCGCGACTACCTGCCGCCGGCGC TGAAGGCGCAAGGCGCCGACGTCATCGCGCAGATCGCCATCCCGCCTACGGAATCCTCCTTCACCAAATATTTTCCGCAG ATCCCGCCGGAGACCGAGGTGATCTACCACGTCATGGTCGGCCCGGCGGTGCTTACCTTCGTCAAGGAACTCGGCGAGTT CTACGGCTCCAACCGGCCGCAGCTGTTCGGCTTCATGGATTCGCTGGAAGCCACCGACATCAACAGCCCCGGGCTGGAAT TCCTGGATGGCAGCCATTTCTGGGAGGGTTCGCCGCGCTATGCGCAGGCCGATGACAGCGCCGCGCAAAAAGCCTATCGC GCCGCCGTCGGCATCGACGACAATGGCGCGGCCGTCGGCGATCCCAAGGACGTCTCCACCGCGTCGCACATGTTCGGCTG CTGGGAGACGCTCTATGTCGTCAAGAAGGCCATGGAAGACGCCGGCTACAAGGGCCCGGAAGACCGCGCCAAGCTGGTCG AGGCAACCGAGGCGCTGACCGCCTTTGCCGAAGGGCCCGAGCATCCGCAGGGCGCGAAAACCTTCAACGGCAAGATCCAC CAGTGCTTCGGCATACAGAACATCTCCAAGGTCGAAGGCGGCAAGCTGAAGGTGGTGCACAAGACCAAGATCGAGGACGG GCTTTACGAAGCCGAGGGCGATTACACGACGCAGGCGCTGTGA
Upstream 100 bases:
>100_bases GGTGATTTAGTTTGTACACATGCAATTTTCCGCATCCTCCGAGCGAGGATGCCGAACCCGCCTTATCGTTGGTCAAGACT GAAAAAACAGGGGAACGAAC
Downstream 100 bases:
>100_bases GGCCTCACCCTCCCCCTTGTGGGGAGGGTCGGCGAACAGGCTTCGCATTTGCGAAGCCGGTGAGACGGGGTGGGGGCTGC GACGGCCCATGCCCCACCCC
Product: branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQSHRTGIGAAYGRWYEKTTAAA VKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQHKTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVAST KLNRYVFQPGITDVKSQIQSMAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHFWEGSPRYAQADDSAAQKAYR AAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMEDAGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIH QCFGIQNISKVEGGKLKVVHKTKIEDGLYEAEGDYTTQAL
Sequences:
>Translated_440_residues MADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQSHRTGIGAAYGRWYEKTTAAA VKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQHKTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVAST KLNRYVFQPGITDVKSQIQSMAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHFWEGSPRYAQADDSAAQKAYR AAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMEDAGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIH QCFGIQNISKVEGGKLKVVHKTKIEDGLYEAEGDYTTQAL >Mature_439_residues ADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQSHRTGIGAAYGRWYEKTTAAAV KAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQHKTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVASTK LNRYVFQPGITDVKSQIQSMAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQI PPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHFWEGSPRYAQADDSAAQKAYRA AVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMEDAGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIHQ CFGIQNISKVEGGKLKVVHKTKIEDGLYEAEGDYTTQAL
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47133; Mature: 47001
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQS CCCCCCCEECCCCCCEECCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCCEEEECCC HRTGIGAAYGRWYEKTTAAAVKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC KTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVASTKLNRYVFQPGITDVKSQIQS CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEHHHHHHHEEECCCHHHHHHHHHH MAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ HCCHHHCCCCCHHHHHCCHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHCCC IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHF CCCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCHHCCCCCC WEGSPRYAQADDSAAQKAYRAAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMED CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIHQCFGIQNISKVEGGKLKVVH CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE KTKIEDGLYEAEGDYTTQAL ECCCCCCCEECCCCEECCCC >Mature Secondary Structure ADKNGFFDLSKTGLISKTGLTRRTALKGLAATAGLAVAPGFVRYSQAQSSAPIKIGFQS CCCCCCEECCCCCCEECCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCCCEEEECCC HRTGIGAAYGRWYEKTTAAAVKAINAAGGINGRPVEVIIEDDGTDPGRGAEVVGKFATQH CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC KTDIVFGTLFSHVVIGSAPAAGEAKIPYFVVSEGHHVASTKLNRYVFQPGITDVKSQIQS CHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEHHHHHHHEEECCCHHHHHHHHHH MAPWIAANAGKKVTQIFPDFAFGYDHRDYLPPALKAQGADVIAQIAIPPTESSFTKYFPQ HCCHHHCCCCCHHHHHCCHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCHHHHHCCC IPPETEVIYHVMVGPAVLTFVKELGEFYGSNRPQLFGFMDSLEATDINSPGLEFLDGSHF CCCCHHEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCHHCCCCCC WEGSPRYAQADDSAAQKAYRAAVGIDDNGAAVGDPKDVSTASHMFGCWETLYVVKKAMED CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AGYKGPEDRAKLVEATEALTAFAEGPEHPQGAKTFNGKIHQCFGIQNISKVEGGKLKVVH CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE KTKIEDGLYEAEGDYTTQAL ECCCCCCCEECCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA