| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474086
Identifier: 13474086
GI number: 13474086
Start: 3878713
End: 3880122
Strand: Direct
Name: 13474086
Synonym: mlr4884
Alternate gene names: NA
Gene position: 3878713-3880122 (Clockwise)
Preceding gene: 13474085
Following gene: 13474095
Centisome position: 55.13
GC content: 64.89
Gene sequence:
>1410_bases ATGGCGGGTTCGGCCATCGCCTTCGCCATGCTGTTTCCGGACGCGGCCGTCGCGGCCGAGGAACACGCGCTGCCCGGCGC CGCGATGTCGCTGTGGTGGGCGCTGCCCTTTGCCGGTCTGCTGCTGTCGATCGCCACCGGTCCGCTGCTGTTCCACCATG TCTGGGAGCATCATTACGGCAAGATCGCGGCCCTGTGGGCGGCACTGGTTGTCGTGCCGCTGGCGCTCGCCTTCGGGATC CCCCAGGCGACCGAGGCGGTGCTGCATGCGCTGCTCACCGAATACATGTCCTTCATCATCCTGCTGTTTGCGCTGTTCAC CATTTCGGGCGGTATCCTGGTCGCCGGCAACATCCACGGCACGCCGCTGGTCAATGCCGGGCTGCTGCTGGTCGGCGCGC TGTTCGCCTCGGTCATCGGCACGACGGGCGCCTCGATGATCCTGATCCGGCCGATCATCCGCGCCAACGACGCCAGGCCG TTCAACGCCCATGTCGTCGTCTTCTTCATCTTCCTGGCCTCCAACATAGGCGGCTCGCTGACGCCGCTCGGCGATCCCCC GCTGTTCGTCGGCTTCCTGCGCGGCGTCGACTTCTTCTGGACGACCGCCAACCTCTGGCGCGAGACGCTGTTCGTCGGCG GCCTGGTGCTGGCCGTGTTCCTGGCCATCGACATCATCCTGCACCGGCGCGAGGCAGGCGCGCCGAAGATCAAGGACCCG ACGCCGGATTCGAAGGTTCGCATTCGCGGCCTGCCCAACATTCCGCTGCTGGCCGGCGTCATCGGCGCCATCCTGCTGTC GGCGACGTGGAAGCCTGGTGTGTCCTTCTCCATTCAAGGCGTGACGCTGGAACTGCAAAACCTGGTGCGTGACGCCATCA TCCTGGCGCTTGCCTTCGTGTCACTGGCGGTTTCGCGCAAGGAATACCGCGAGGCGAACGGCTTCAACTGGGGGCCGATC GCCGAAGTGGCGAAATTGTTTGCCGGCATCTTCATCTGCATCGTGCCGGTCATCGCCATCCTGAGGGCCGGTCACGAGGG CGCGCTGGCGCCGCTGGTCGCGCTCGTCACCTCGGCGCAAGGCACGCCCAACAACCTCGCCTATTTCTGGCTGACCGGAG CGCTGTCGTCCTTCCTCGACAATGCACCGACCTATCTGGTGTTCTTCGAGCTTGCCGGCGGCGATCCACACCACCTGATG ACCGAATTCGCCTCGACCCTTGCCGCTATCTCGGCGGGAGCGGTGTTCATGGGGGCCAACACCTATATCGGCAATGCGCC CAACTTCATGGTCTACGCCATCGCCAGGCAGCGCGGCGTGGAAATGCCCGGCTTCTTCGGCTACATGCTGTGGTCCGGGC TGGTGCTGATCCCGACCTTCTTGATCGCGGGTTTTCTGTTTTTCGGCTGA
Upstream 100 bases:
>100_bases CGGCGCATGCGCGATGCCGGCGTGGCGCTCGAAGACCATTTGTCGGACTGAACGGAAGGTGGGGCGGCAGGGGGACTTTT CGCGGATGAGTGCAGGCGTG
Downstream 100 bases:
>100_bases TCAGCCAACGCCGACATAGCGCCTGACCGCCGATGGGTCGGCGCGCAATTCCTCGACATCCACCGTCTCGCGGTTGCGGC CGTTCTCGATGAACGAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MAGSAIAFAMLFPDAAVAAEEHALPGAAMSLWWALPFAGLLLSIATGPLLFHHVWEHHYGKIAALWAALVVVPLALAFGI PQATEAVLHALLTEYMSFIILLFALFTISGGILVAGNIHGTPLVNAGLLLVGALFASVIGTTGASMILIRPIIRANDARP FNAHVVVFFIFLASNIGGSLTPLGDPPLFVGFLRGVDFFWTTANLWRETLFVGGLVLAVFLAIDIILHRREAGAPKIKDP TPDSKVRIRGLPNIPLLAGVIGAILLSATWKPGVSFSIQGVTLELQNLVRDAIILALAFVSLAVSRKEYREANGFNWGPI AEVAKLFAGIFICIVPVIAILRAGHEGALAPLVALVTSAQGTPNNLAYFWLTGALSSFLDNAPTYLVFFELAGGDPHHLM TEFASTLAAISAGAVFMGANTYIGNAPNFMVYAIARQRGVEMPGFFGYMLWSGLVLIPTFLIAGFLFFG
Sequences:
>Translated_469_residues MAGSAIAFAMLFPDAAVAAEEHALPGAAMSLWWALPFAGLLLSIATGPLLFHHVWEHHYGKIAALWAALVVVPLALAFGI PQATEAVLHALLTEYMSFIILLFALFTISGGILVAGNIHGTPLVNAGLLLVGALFASVIGTTGASMILIRPIIRANDARP FNAHVVVFFIFLASNIGGSLTPLGDPPLFVGFLRGVDFFWTTANLWRETLFVGGLVLAVFLAIDIILHRREAGAPKIKDP TPDSKVRIRGLPNIPLLAGVIGAILLSATWKPGVSFSIQGVTLELQNLVRDAIILALAFVSLAVSRKEYREANGFNWGPI AEVAKLFAGIFICIVPVIAILRAGHEGALAPLVALVTSAQGTPNNLAYFWLTGALSSFLDNAPTYLVFFELAGGDPHHLM TEFASTLAAISAGAVFMGANTYIGNAPNFMVYAIARQRGVEMPGFFGYMLWSGLVLIPTFLIAGFLFFG >Mature_468_residues AGSAIAFAMLFPDAAVAAEEHALPGAAMSLWWALPFAGLLLSIATGPLLFHHVWEHHYGKIAALWAALVVVPLALAFGIP QATEAVLHALLTEYMSFIILLFALFTISGGILVAGNIHGTPLVNAGLLLVGALFASVIGTTGASMILIRPIIRANDARPF NAHVVVFFIFLASNIGGSLTPLGDPPLFVGFLRGVDFFWTTANLWRETLFVGGLVLAVFLAIDIILHRREAGAPKIKDPT PDSKVRIRGLPNIPLLAGVIGAILLSATWKPGVSFSIQGVTLELQNLVRDAIILALAFVSLAVSRKEYREANGFNWGPIA EVAKLFAGIFICIVPVIAILRAGHEGALAPLVALVTSAQGTPNNLAYFWLTGALSSFLDNAPTYLVFFELAGGDPHHLMT EFASTLAAISAGAVFMGANTYIGNAPNFMVYAIARQRGVEMPGFFGYMLWSGLVLIPTFLIAGFLFFG
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49871; Mature: 49740
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSAIAFAMLFPDAAVAAEEHALPGAAMSLWWALPFAGLLLSIATGPLLFHHVWEHHYG CCCCCEEHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIAALWAALVVVPLALAFGIPQATEAVLHALLTEYMSFIILLFALFTISGGILVAGNIHG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC TPLVNAGLLLVGALFASVIGTTGASMILIRPIIRANDARPFNAHVVVFFIFLASNIGGSL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC TPLGDPPLFVGFLRGVDFFWTTANLWRETLFVGGLVLAVFLAIDIILHRREAGAPKIKDP CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPDSKVRIRGLPNIPLLAGVIGAILLSATWKPGVSFSIQGVTLELQNLVRDAIILALAFV CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH SLAVSRKEYREANGFNWGPIAEVAKLFAGIFICIVPVIAILRAGHEGALAPLVALVTSAQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC GTPNNLAYFWLTGALSSFLDNAPTYLVFFELAGGDPHHLMTEFASTLAAISAGAVFMGAN CCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCC TYIGNAPNFMVYAIARQRGVEMPGFFGYMLWSGLVLIPTFLIAGFLFFG CCCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGSAIAFAMLFPDAAVAAEEHALPGAAMSLWWALPFAGLLLSIATGPLLFHHVWEHHYG CCCCEEHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIAALWAALVVVPLALAFGIPQATEAVLHALLTEYMSFIILLFALFTISGGILVAGNIHG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC TPLVNAGLLLVGALFASVIGTTGASMILIRPIIRANDARPFNAHVVVFFIFLASNIGGSL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC TPLGDPPLFVGFLRGVDFFWTTANLWRETLFVGGLVLAVFLAIDIILHRREAGAPKIKDP CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TPDSKVRIRGLPNIPLLAGVIGAILLSATWKPGVSFSIQGVTLELQNLVRDAIILALAFV CCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH SLAVSRKEYREANGFNWGPIAEVAKLFAGIFICIVPVIAILRAGHEGALAPLVALVTSAQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC GTPNNLAYFWLTGALSSFLDNAPTYLVFFELAGGDPHHLMTEFASTLAAISAGAVFMGAN CCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCC TYIGNAPNFMVYAIARQRGVEMPGFFGYMLWSGLVLIPTFLIAGFLFFG CCCCCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA