| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474070
Identifier: 13474070
GI number: 13474070
Start: 3863031
End: 3863840
Strand: Reverse
Name: 13474070
Synonym: mll4861
Alternate gene names: NA
Gene position: 3863840-3863031 (Counterclockwise)
Preceding gene: 13474072
Following gene: 13474069
Centisome position: 54.91
GC content: 64.69
Gene sequence:
>810_bases ATGCGGATCCACATCGGCTGCGAGATGAGCTTCGACTTCCCGCAGGAAACGCCGCTCATCGCGATGCTCAATGTCCACTA TTCGCGCGCCTCCGACCTCGAGCGGCCGGATTTCCTGACCTCCAGCCCGCCAGTTCCGGTTGAGGGTTATCGCGACAGTT TCGGCAATTGGTGCAACCGCTTCGTCGCGCCGCCCGGGCGGTTCACCTTCGGTACGGATGCGGTGATCCGAGACCCCGGC ACATTCGAGATGGGCGAGCCGATGGCCTGGCAGCACGAGGTGCGCGACCTGCCGGCGGAAACGCTGCTGTTCCTGCTCCC CAGCCGGTTTTGCGAGAGCGACCTGTTGGCCAGCGAAGCCTGGCGGCTGTTCGGCCATACGCCGCTTGGCATTGCGCGCG TGCAGGCGGTGTGCGACTTCGTCCACAACCACATCGTCTTCAACTACAGCAATGCGCGGCCGACGCGCACCGCGGCGGAA GCCTATCGTGAACAGAGCGGCGTGTGCCGCGACTTCGCGCATCTTGCCGTCACCTTCTGCCGGGCGCTCAACATCCCGAC GCGCTACTGCACCGGCTACATCAGCGATATCGGCATGCCGAAGCCCTGGTCGGACATGGATTTCGCCGCTTGGATGGAAG TCTATCTCGGCGGCCGCTGGCACGTCTTCGACCCGCGCAACAATGCGCCGCGCATCGGCCGCATCCTGATCGCTTCCGGG CGCGACGCGGCGGATGTGCCGCTGACCCATATTTTCGGACCGGGGACACTGGCTGGCTTCAGGGTGTGGACCGACGAGAT CGTCGAATAG
Upstream 100 bases:
>100_bases GCTCGTAAACCATGGCCGTCCGTGCCATTCTCATCTTCGCACTGCAGCATCGACCCGCGCCTTCGCCGGGTGATCGTCGG GCAGGCCGGTCAGGACGACA
Downstream 100 bases:
>100_bases TCGCCGTCTCCCGCCGGCCGGTCCCAAACAAATCGCGTCTTGAACGACCCGGCAGTTGGCGCGTTATGGTGGAGCCGCGG CCGTCCGGCCGTTACACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase-Like Cysteine Protease; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Transglutaminase/Protease; Transglutaminase; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase Protein; Transglutaminase/Protease-Like Protein; Transglutaminase-Like S Cysteine Protease; Cystein Protease
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNRFVAPPGRFTFGTDAVIRDPG TFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEAWRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAE AYREQSGVCRDFAHLAVTFCRALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG RDAADVPLTHIFGPGTLAGFRVWTDEIVE
Sequences:
>Translated_269_residues MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNRFVAPPGRFTFGTDAVIRDPG TFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEAWRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAE AYREQSGVCRDFAHLAVTFCRALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG RDAADVPLTHIFGPGTLAGFRVWTDEIVE >Mature_269_residues MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNRFVAPPGRFTFGTDAVIRDPG TFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEAWRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAE AYREQSGVCRDFAHLAVTFCRALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG RDAADVPLTHIFGPGTLAGFRVWTDEIVE
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30404; Mature: 30404
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNR CEEEEEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FVAPPGRFTFGTDAVIRDPGTFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEA HCCCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAEAYREQSGVCRDFAHLAVTFC HHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH RALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG HHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECC RDAADVPLTHIFGPGTLAGFRVWTDEIVE CCCCCCCCEEEECCCCHHHHEECHHHHCC >Mature Secondary Structure MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNR CEEEEEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH FVAPPGRFTFGTDAVIRDPGTFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEA HCCCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAEAYREQSGVCRDFAHLAVTFC HHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH RALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG HHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECC RDAADVPLTHIFGPGTLAGFRVWTDEIVE CCCCCCCCEEEECCCCHHHHEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA