Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474070

Identifier: 13474070

GI number: 13474070

Start: 3863031

End: 3863840

Strand: Reverse

Name: 13474070

Synonym: mll4861

Alternate gene names: NA

Gene position: 3863840-3863031 (Counterclockwise)

Preceding gene: 13474072

Following gene: 13474069

Centisome position: 54.91

GC content: 64.69

Gene sequence:

>810_bases
ATGCGGATCCACATCGGCTGCGAGATGAGCTTCGACTTCCCGCAGGAAACGCCGCTCATCGCGATGCTCAATGTCCACTA
TTCGCGCGCCTCCGACCTCGAGCGGCCGGATTTCCTGACCTCCAGCCCGCCAGTTCCGGTTGAGGGTTATCGCGACAGTT
TCGGCAATTGGTGCAACCGCTTCGTCGCGCCGCCCGGGCGGTTCACCTTCGGTACGGATGCGGTGATCCGAGACCCCGGC
ACATTCGAGATGGGCGAGCCGATGGCCTGGCAGCACGAGGTGCGCGACCTGCCGGCGGAAACGCTGCTGTTCCTGCTCCC
CAGCCGGTTTTGCGAGAGCGACCTGTTGGCCAGCGAAGCCTGGCGGCTGTTCGGCCATACGCCGCTTGGCATTGCGCGCG
TGCAGGCGGTGTGCGACTTCGTCCACAACCACATCGTCTTCAACTACAGCAATGCGCGGCCGACGCGCACCGCGGCGGAA
GCCTATCGTGAACAGAGCGGCGTGTGCCGCGACTTCGCGCATCTTGCCGTCACCTTCTGCCGGGCGCTCAACATCCCGAC
GCGCTACTGCACCGGCTACATCAGCGATATCGGCATGCCGAAGCCCTGGTCGGACATGGATTTCGCCGCTTGGATGGAAG
TCTATCTCGGCGGCCGCTGGCACGTCTTCGACCCGCGCAACAATGCGCCGCGCATCGGCCGCATCCTGATCGCTTCCGGG
CGCGACGCGGCGGATGTGCCGCTGACCCATATTTTCGGACCGGGGACACTGGCTGGCTTCAGGGTGTGGACCGACGAGAT
CGTCGAATAG

Upstream 100 bases:

>100_bases
GCTCGTAAACCATGGCCGTCCGTGCCATTCTCATCTTCGCACTGCAGCATCGACCCGCGCCTTCGCCGGGTGATCGTCGG
GCAGGCCGGTCAGGACGACA

Downstream 100 bases:

>100_bases
TCGCCGTCTCCCGCCGGCCGGTCCCAAACAAATCGCGTCTTGAACGACCCGGCAGTTGGCGCGTTATGGTGGAGCCGCGG
CCGTCCGGCCGTTACACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase Family Protein; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase-Like Cysteine Protease; Cysteine Protease Transglutaminase-Like Protein; Transglutaminase-Like S Cysteine Proteases; Transglutaminase/Protease; Transglutaminase; Protease Transglutaminase-Like; Cysteine Protease; Transglutaminase Protein; Transglutaminase/Protease-Like Protein; Transglutaminase-Like S Cysteine Protease; Cystein Protease

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNRFVAPPGRFTFGTDAVIRDPG
TFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEAWRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAE
AYREQSGVCRDFAHLAVTFCRALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG
RDAADVPLTHIFGPGTLAGFRVWTDEIVE

Sequences:

>Translated_269_residues
MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNRFVAPPGRFTFGTDAVIRDPG
TFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEAWRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAE
AYREQSGVCRDFAHLAVTFCRALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG
RDAADVPLTHIFGPGTLAGFRVWTDEIVE
>Mature_269_residues
MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNRFVAPPGRFTFGTDAVIRDPG
TFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEAWRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAE
AYREQSGVCRDFAHLAVTFCRALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG
RDAADVPLTHIFGPGTLAGFRVWTDEIVE

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30404; Mature: 30404

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNR
CEEEEEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FVAPPGRFTFGTDAVIRDPGTFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEA
HCCCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAEAYREQSGVCRDFAHLAVTFC
HHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
RALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG
HHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECC
RDAADVPLTHIFGPGTLAGFRVWTDEIVE
CCCCCCCCEEEECCCCHHHHEECHHHHCC
>Mature Secondary Structure
MRIHIGCEMSFDFPQETPLIAMLNVHYSRASDLERPDFLTSSPPVPVEGYRDSFGNWCNR
CEEEEEEEEECCCCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
FVAPPGRFTFGTDAVIRDPGTFEMGEPMAWQHEVRDLPAETLLFLLPSRFCESDLLASEA
HCCCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WRLFGHTPLGIARVQAVCDFVHNHIVFNYSNARPTRTAAEAYREQSGVCRDFAHLAVTFC
HHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
RALNIPTRYCTGYISDIGMPKPWSDMDFAAWMEVYLGGRWHVFDPRNNAPRIGRILIASG
HHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECC
RDAADVPLTHIFGPGTLAGFRVWTDEIVE
CCCCCCCCEEEECCCCHHHHEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA