BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 13474006

GI number: 13474006

Start: 3800033

End: 3800764

Strand: Reverse

Name: fabG [H]

Synonym: mll4781

Alternate gene names: 13474006

Gene position: 3800764-3800033 (Counterclockwise)

Preceding gene: 13474007

Following gene: 13474005

Centisome position: 54.02

GC content: 65.16

Gene sequence:

>732_bases
ATGGCGGATCTGGCAGGCAAGGTCGTTGTCATCACGGCGGCGGCGCAAGGCATCGGCAAGGCGAGCGCGCTGGCCTTCGC
CAAGACTGGAGCCACCGTCCACGCCACCGACATCAACGAGACGCTTCTCGCCGAACTCGCCAAGACGCCAGGGATCAAGA
CCCGCAAGCTGGATGTGCTCAACGACGAGGCCGTCAACACCACCTTCGCCGAGATCGGCCGCGTCGACGTGCTGTTCAAC
TGCGCCGGCTTCGTCCATTCCGGCTCGATCCTGGAGATGAAGGATGGCGATCTCGATTTCGCCTTCAACCTCAATGTCCG
CGCCATGATCCGCACCATCAGGGCCGTGCTGCCCGGCATGCTGGAACGAGGCGACGGATCGATCGTCAACATGTCTTCCG
TCGCCGGCGCCGGCAAAGGCGTGCCGAACCGCTTCGCCTATGGCGTCACCAAGGCCGCCGTCATCGGCCTGACCAAGGCG
ATTGCCGCCGACTATGTCGGCAAGGGCATACGCTGCAACGCCATCTGCCCCGGCACGGTCGAAAGCCCGTCGCTGCAGGA
CCGCATGCATGCGCAAGGCGACTACGAAGCCGCCCGCGCCGCCTTCATCGCCCGCCAGCCAATGGGCCGGCTCGGCACGC
CTGAGGAAATCGCCGATCTCGCGGTCTATCTGGCCGGCGCGACCTACACGTCCGGGCAGGCCTATAATATCGACGGCGGC
TGGTCGATCTGA

Upstream 100 bases:

>100_bases
CTGGCTGCGACACAGGCCGCACAATCGAGCCTGACTGGCACATGACGCCTTGGCCGGCCGCCGATAAAGGCAGTTGACCC
AAGCAGGCGAGGAAAGAAGC

Downstream 100 bases:

>100_bases
GATCGGGCTCCGCCCCAACGTTTGCGCTGGATCAGGAAGTCTGAAAATCCCGCGCGCCGGCCCGCCCGACAGCTGTCGGC
GCTTGCCCGGGATCAGGTCG

Product: oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MADLAGKVVVITAAAQGIGKASALAFAKTGATVHATDINETLLAELAKTPGIKTRKLDVLNDEAVNTTFAEIGRVDVLFN
CAGFVHSGSILEMKDGDLDFAFNLNVRAMIRTIRAVLPGMLERGDGSIVNMSSVAGAGKGVPNRFAYGVTKAAVIGLTKA
IAADYVGKGIRCNAICPGTVESPSLQDRMHAQGDYEAARAAFIARQPMGRLGTPEEIADLAVYLAGATYTSGQAYNIDGG
WSI

Sequences:

>Translated_243_residues
MADLAGKVVVITAAAQGIGKASALAFAKTGATVHATDINETLLAELAKTPGIKTRKLDVLNDEAVNTTFAEIGRVDVLFN
CAGFVHSGSILEMKDGDLDFAFNLNVRAMIRTIRAVLPGMLERGDGSIVNMSSVAGAGKGVPNRFAYGVTKAAVIGLTKA
IAADYVGKGIRCNAICPGTVESPSLQDRMHAQGDYEAARAAFIARQPMGRLGTPEEIADLAVYLAGATYTSGQAYNIDGG
WSI
>Mature_242_residues
ADLAGKVVVITAAAQGIGKASALAFAKTGATVHATDINETLLAELAKTPGIKTRKLDVLNDEAVNTTFAEIGRVDVLFNC
AGFVHSGSILEMKDGDLDFAFNLNVRAMIRTIRAVLPGMLERGDGSIVNMSSVAGAGKGVPNRFAYGVTKAAVIGLTKAI
AADYVGKGIRCNAICPGTVESPSLQDRMHAQGDYEAARAAFIARQPMGRLGTPEEIADLAVYLAGATYTSGQAYNIDGGW
SI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=56.734693877551, Blast_Score=265, Evalue=2e-71,
Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=31.1475409836066, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=28.7937743190661, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI210032110, Length=203, Percent_Identity=31.0344827586207, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=27.9352226720648, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI142976729, Length=199, Percent_Identity=32.1608040201005, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI32483357, Length=249, Percent_Identity=30.1204819277108, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI210032112, Length=190, Percent_Identity=29.4736842105263, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI59889578, Length=229, Percent_Identity=31.0043668122271, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=26.7441860465116, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI40807363, Length=195, Percent_Identity=29.7435897435897, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=29.3650793650794, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI4504505, Length=187, Percent_Identity=28.3422459893048, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI31542939, Length=208, Percent_Identity=30.2884615384615, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI10190704, Length=256, Percent_Identity=28.515625, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=26.5873015873016, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=29.5918367346939, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI7657478, Length=186, Percent_Identity=31.7204301075269, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=39.1472868217054, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=30.8943089430894, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789208, Length=259, Percent_Identity=30.5019305019305, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=29.718875502008, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=31.2, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787905, Length=252, Percent_Identity=30.952380952381, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=29.6, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.5081967213115, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=27.4900398406374, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787820, Length=234, Percent_Identity=28.6324786324786, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=25.8823529411765, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=28.6852589641434, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787545, Length=267, Percent_Identity=28.0898876404494, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=33.976833976834, Blast_Score=122, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=33.0708661417323, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17560150, Length=274, Percent_Identity=31.021897810219, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17559104, Length=267, Percent_Identity=31.0861423220974, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=29.4339622641509, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=30.4347826086957, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=29.1512915129151, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562990, Length=274, Percent_Identity=30.2919708029197, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI72000259, Length=273, Percent_Identity=30.4029304029304, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17563726, Length=267, Percent_Identity=30.7116104868914, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562910, Length=269, Percent_Identity=30.4832713754647, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=29.1044776119403, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=29.9625468164794, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.4339622641509, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17538182, Length=260, Percent_Identity=31.1538461538462, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=32.2709163346614, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=274, Percent_Identity=28.8321167883212, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=27.5092936802974, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=271, Percent_Identity=30.6273062730627, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=29.1497975708502, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=28.1124497991968, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=30, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=26.5060240963855, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=30.3370786516854, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=200, Percent_Identity=30.5, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203115, Length=186, Percent_Identity=31.7204301075269, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=186, Percent_Identity=31.1827956989247, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=273, Percent_Identity=27.8388278388278, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=252, Percent_Identity=25.7936507936508, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=226, Percent_Identity=27.8761061946903, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=276, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=262, Percent_Identity=27.0992366412214, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=26.9230769230769, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17567345, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=262, Percent_Identity=28.6259541984733, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=238, Percent_Identity=30.672268907563, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322861, Length=252, Percent_Identity=29.3650793650794, Blast_Score=74, Evalue=1e-14,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=30.8, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=32.8185328185328, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355319, Length=258, Percent_Identity=34.1085271317829, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=31.3008130081301, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=31.7829457364341, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=30.7392996108949, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=33.852140077821, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24640492, Length=186, Percent_Identity=32.7956989247312, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281364892, Length=172, Percent_Identity=33.7209302325581, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=31.496062992126, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581726, Length=195, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859837, Length=192, Percent_Identity=26.5625, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=29.8969072164948, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24665243, Length=190, Percent_Identity=31.0526315789474, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221331218, Length=190, Percent_Identity=31.0526315789474, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=28.4883720930233, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221510726, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24641232, Length=236, Percent_Identity=26.6949152542373, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25293; Mature: 25162

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLAGKVVVITAAAQGIGKASALAFAKTGATVHATDINETLLAELAKTPGIKTRKLDVL
CCCCCCCEEEEEECCCCCCCHHHHEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEEECC
NDEAVNTTFAEIGRVDVLFNCAGFVHSGSILEMKDGDLDFAFNLNVRAMIRTIRAVLPGM
CCCHHHHHHHHHCCEEEEEECHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHH
LERGDGSIVNMSSVAGAGKGVPNRFAYGVTKAAVIGLTKAIAADYVGKGIRCNAICPGTV
HHCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEECCCCC
ESPSLQDRMHAQGDYEAARAAFIARQPMGRLGTPEEIADLAVYLAGATYTSGQAYNIDGG
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEECCCEEEECCCC
WSI
CCC
>Mature Secondary Structure 
ADLAGKVVVITAAAQGIGKASALAFAKTGATVHATDINETLLAELAKTPGIKTRKLDVL
CCCCCCEEEEEECCCCCCCHHHHEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEEECC
NDEAVNTTFAEIGRVDVLFNCAGFVHSGSILEMKDGDLDFAFNLNVRAMIRTIRAVLPGM
CCCHHHHHHHHHCCEEEEEECHHHHCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHH
LERGDGSIVNMSSVAGAGKGVPNRFAYGVTKAAVIGLTKAIAADYVGKGIRCNAICPGTV
HHCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEECCCCC
ESPSLQDRMHAQGDYEAARAAFIARQPMGRLGTPEEIADLAVYLAGATYTSGQAYNIDGG
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEECCCEEEECCCC
WSI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]