| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473932
Identifier: 13473932
GI number: 13473932
Start: 3722204
End: 3722818
Strand: Direct
Name: 13473932
Synonym: mlr4688
Alternate gene names: NA
Gene position: 3722204-3722818 (Clockwise)
Preceding gene: 13473931
Following gene: 13473934
Centisome position: 52.9
GC content: 56.91
Gene sequence:
>615_bases ATGGCGAAATATAAGGTTGTGACGTTCTCACCTAGTGCTGATCAGCCGGACGTGGCGAGCCAGGTGCCGCCAAATACGCA ACCGCCCCCGTCAGCTCCGCCGGTACTTGCCTCCCAACCACCAACAACTGGTCCGTCGCTCTTCATTCCAGATGCCCGTT CAGGGCGGATCGGGCACCCCAGGGGCGCTGCACCCCTCAAGGCACTACCCGAGGCAAAGTCAGAGAATGTTGCCATAATA CGGAACGGGGTTGCCGTTGCGATCCTAGGTAATACGGGCCGATGTTATAATGTCCAGGTCGGAAACAAGGTTGGCTATAT GCATGACACTTGGATCCACGTCGACCAGTACGACAGTGGCCCCTTCGGTAAGCGCCATATCCAGGTGAAAAGCTTCGGCG ACTACGCTGCGGCCGAGGCGTATGTGCGGTCCTCATCCATCCCGCTTTCAGCCTATCTCGCCACCAATGGTTGGTTCGCA ATCACCCTCGATAGCACGTTCGACGAGCGTATGGCTAAAAACCTGGCCAATGAGATGAAGGCTAGGGGTGCGATCCCTGC GGATGCATACCCCACTTTCGGCAACAATTACGTCCGCAAAGTGAGCTGCCAATAG
Upstream 100 bases:
>100_bases TATAATCACCTACATGATCGAAATGGGTGCGGACCCTGCCCTACTTCAGCTTTCGCTGCAGTACGACAGCAACGACATTC GCTAGCTGTCGACGAGCGAG
Downstream 100 bases:
>100_bases TTTCGGTGGAATGCGGGACTGCCCTTCTTTGTCAGCCTTGCCTTTGTAGAAGGCCGCACAGGTTGGTGATTGCTTCGTCA ATTCCTTGTTCATCTCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAKYKVVTFSPSADQPDVASQVPPNTQPPPSAPPVLASQPPTTGPSLFIPDARSGRIGHPRGAAPLKALPEAKSENVAII RNGVAVAILGNTGRCYNVQVGNKVGYMHDTWIHVDQYDSGPFGKRHIQVKSFGDYAAAEAYVRSSSIPLSAYLATNGWFA ITLDSTFDERMAKNLANEMKARGAIPADAYPTFGNNYVRKVSCQ
Sequences:
>Translated_204_residues MAKYKVVTFSPSADQPDVASQVPPNTQPPPSAPPVLASQPPTTGPSLFIPDARSGRIGHPRGAAPLKALPEAKSENVAII RNGVAVAILGNTGRCYNVQVGNKVGYMHDTWIHVDQYDSGPFGKRHIQVKSFGDYAAAEAYVRSSSIPLSAYLATNGWFA ITLDSTFDERMAKNLANEMKARGAIPADAYPTFGNNYVRKVSCQ >Mature_203_residues AKYKVVTFSPSADQPDVASQVPPNTQPPPSAPPVLASQPPTTGPSLFIPDARSGRIGHPRGAAPLKALPEAKSENVAIIR NGVAVAILGNTGRCYNVQVGNKVGYMHDTWIHVDQYDSGPFGKRHIQVKSFGDYAAAEAYVRSSSIPLSAYLATNGWFAI TLDSTFDERMAKNLANEMKARGAIPADAYPTFGNNYVRKVSCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21876; Mature: 21745
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYKVVTFSPSADQPDVASQVPPNTQPPPSAPPVLASQPPTTGPSLFIPDARSGRIGHP CCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC RGAAPLKALPEAKSENVAIIRNGVAVAILGNTGRCYNVQVGNKVGYMHDTWIHVDQYDSG CCCCCHHHCCCCCCCCEEEEECCEEEEEECCCCCEEEEEECCEECCEEEEEEEEECCCCC PFGKRHIQVKSFGDYAAAEAYVRSSSIPLSAYLATNGWFAITLDSTFDERMAKNLANEMK CCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHH ARGAIPADAYPTFGNNYVRKVSCQ HCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure AKYKVVTFSPSADQPDVASQVPPNTQPPPSAPPVLASQPPTTGPSLFIPDARSGRIGHP CCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC RGAAPLKALPEAKSENVAIIRNGVAVAILGNTGRCYNVQVGNKVGYMHDTWIHVDQYDSG CCCCCHHHCCCCCCCCEEEEECCEEEEEECCCCCEEEEEECCEECCEEEEEEEEECCCCC PFGKRHIQVKSFGDYAAAEAYVRSSSIPLSAYLATNGWFAITLDSTFDERMAKNLANEMK CCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHH ARGAIPADAYPTFGNNYVRKVSCQ HCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA