Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is cya3 [H]

Identifier: 13473903

GI number: 13473903

Start: 3687086

End: 3689101

Strand: Reverse

Name: cya3 [H]

Synonym: mll4650

Alternate gene names: 13473903

Gene position: 3689101-3687086 (Counterclockwise)

Preceding gene: 13473907

Following gene: 13473902

Centisome position: 52.43

GC content: 68.45

Gene sequence:

>2016_bases
GTGGAATCCGCACCATCGAGGCTGGACGGCGATAGGCCGCGCCTGTCGGTGCGCCTGCTCGGACCGCTGGAGATCCTGCG
CGATGGCGTGCCCTTGGCGCTGCCGGCGTCGCGCAAGCTGCGCGCGCTCCTGGCCTATCTGGCGCTGGCGCCGCACGCCG
TGGGCCGCGGCCGCCTGTGCGAGCTGTTGTGGGATGTGCCCAATGATCCCCGTGGCGAGTTGCGCTGGTGCCTGAGCAAG
CTGCGAGCCGCTCTCGACACGCCGGACCGGCGCCGGGTCACCACACAAGGTGATGCGGTCGCGCTCGATCTCGACGGCTG
CCTTGTCGACGCGCTGGAGATCAGCCAGGCCGCCGCGCAAGGGATCGCCACGCTTGATGTGGAGCGGCTGCAGGGACTGG
CAGGACTGTTCGCCGGCGATCTGCTCGATGGGCTGGAGCTGGAGCGGAGCCCGCATTTCGACAGCTGGCTGGTCGCCCAG
CGACGGCGTTTTGACGCCTACCACGCCGCCGTGCTGGAACAGCTTGCCGCGAGCCTGCCGGCGGATTGCGACGAAACGGT
CAGCCGTCTCGATCGATGGATAGAGCTGGCGCCGTTCGACACGCGTGCACACGCAGCGCTGCTGGCCAGTCTTGCCCGGC
GCGGCGAGATCGGCGCGGCCGAGCAGCATCTGGCTTCGGCGGAGCGGTTGTTTCAGTCAGAGGACCTGGATTTCGCCCCG
CTTCGCCAGGCCTGGCGGTCGATCCGCGACCAGCGCGCCTCGCACCAGGCGCAACCGGCCGGCCTGCCCACACCATCGCA
CTTGGTCGCCGCCTCTGGTGATACCGGCCCGGTCGAACCCAGCCACGCTTCGCTGGCGGTGATGCCGTTTGTCGACGAAA
GCGGCGCGCGCGGCGGGCTGGCCGACGGTTTCACCCACGACATCATCACCCGTCTCGCCAAGCTTAGGGATTTCTTCGTC
ATCGCGCGCGGATCGGTGTTCGCACTGGCCGAGAAAGCCATCGCGCCGGAGGAGGCCGGCAGAAAACTTGGCGTCGACTA
TGTCGCCAGCGGCACCGTGCGCAGCCTGACCGGCCGCCTGATCGTCAGCGTCGAGCTGGTCGAGGTGCGCACCGCCAGGA
TCGTCTGGGCGGAGACCTTCGAGCGCCGGCCCCATGACCTCTTCGCCGTGCTCGACGATATCGGCGACAGCATCGTGTCG
TCGATCTCGGCCGAGATCGAAACGGTCGAGCGCAACCGCGCCATGCTGAAGGCGCCCAACTCGCTCAATGCCTGGGAGGC
CTATCATCGCGGCCTCTGGCACATGTACCGCTTCACCCAGGCCGAGAACGAGCAGGCGCGGCATTTTTTCGACAAGGCCT
TGCAGCTCGACCCGACCTTTGCCCGCGCCTATGCCGGCCTGTCCTTCACCCACTGGCAGAATGCCTTCCAGCGCTGGGGC
GACCGCGACCGCGAAAGCGCGCTGGCCTATGAGAGCGCCGGCCACAGCCTGCTGGTCGACGACCACAATCCGGCCGCGCA
CTGGGCGATGGGCCGGGCGCTGTGGCTGCGCGGCGAGCAGGACGGATCACTCGCCGAACTGGAACGGGCCGTGGATCTCA
GCCCGAATTTCGCGCTTGGCCATTACGCGCTGTCCTTCGTCCACTCGCAGTCGGGCGACCCGCAGGCGGCGATAGGCTCG
TCCGACCATTCGCGGCATTTGAGCCCCTTCGACCCGCTGCTGTTCGGCATGCTGGGGTCGCGCGCCATGTCGCATGTCCG
GCTCGGCCAGTTCGAGGAGGCGGCCGAATGGGCGCTCAAGGCGGCGGCGCGGCCCAACGCGCACACCATCATCCTGGCGA
TCGCCGCGCATTGCCTGGCGCTGGCCGGCCGGCTCGACGAGGCGCGCGGCTTTGCCGCCGCCATCCGCAAGACATTGCCT
GATTATCGCGCCGACGATTTCATCGGTACCTTCCGCTTCGACCCCGATGCCGAGGCGCTGTTCCGGCAAGGCGCAAGGCG
GATCGGGTTCAGCTGA

Upstream 100 bases:

>100_bases
GACGGTACCCGGCGCGAAATTCGCCCCGGATGCGCCGTGTCACGTTTGGTGATACAGCAGGGGCCGACGGGCCAGCGTGG
GAGCAGGCGTGGAAACGCAC

Downstream 100 bases:

>100_bases
TTTCGCGCTTGAAGCCCAGCGTTAACGAAGTCGGAAGGAGTTGCTTAACGGTTCACCTCTATGTGACCCGTCGGGGGGTC
CATGGCAAAGTGAGTATGAT

Product: adenylate cyclase cya3

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MESAPSRLDGDRPRLSVRLLGPLEILRDGVPLALPASRKLRALLAYLALAPHAVGRGRLCELLWDVPNDPRGELRWCLSK
LRAALDTPDRRRVTTQGDAVALDLDGCLVDALEISQAAAQGIATLDVERLQGLAGLFAGDLLDGLELERSPHFDSWLVAQ
RRRFDAYHAAVLEQLAASLPADCDETVSRLDRWIELAPFDTRAHAALLASLARRGEIGAAEQHLASAERLFQSEDLDFAP
LRQAWRSIRDQRASHQAQPAGLPTPSHLVAASGDTGPVEPSHASLAVMPFVDESGARGGLADGFTHDIITRLAKLRDFFV
IARGSVFALAEKAIAPEEAGRKLGVDYVASGTVRSLTGRLIVSVELVEVRTARIVWAETFERRPHDLFAVLDDIGDSIVS
SISAEIETVERNRAMLKAPNSLNAWEAYHRGLWHMYRFTQAENEQARHFFDKALQLDPTFARAYAGLSFTHWQNAFQRWG
DRDRESALAYESAGHSLLVDDHNPAAHWAMGRALWLRGEQDGSLAELERAVDLSPNFALGHYALSFVHSQSGDPQAAIGS
SDHSRHLSPFDPLLFGMLGSRAMSHVRLGQFEEAAEWALKAAARPNAHTIILAIAAHCLALAGRLDEARGFAAAIRKTLP
DYRADDFIGTFRFDPDAEALFRQGARRIGFS

Sequences:

>Translated_671_residues
MESAPSRLDGDRPRLSVRLLGPLEILRDGVPLALPASRKLRALLAYLALAPHAVGRGRLCELLWDVPNDPRGELRWCLSK
LRAALDTPDRRRVTTQGDAVALDLDGCLVDALEISQAAAQGIATLDVERLQGLAGLFAGDLLDGLELERSPHFDSWLVAQ
RRRFDAYHAAVLEQLAASLPADCDETVSRLDRWIELAPFDTRAHAALLASLARRGEIGAAEQHLASAERLFQSEDLDFAP
LRQAWRSIRDQRASHQAQPAGLPTPSHLVAASGDTGPVEPSHASLAVMPFVDESGARGGLADGFTHDIITRLAKLRDFFV
IARGSVFALAEKAIAPEEAGRKLGVDYVASGTVRSLTGRLIVSVELVEVRTARIVWAETFERRPHDLFAVLDDIGDSIVS
SISAEIETVERNRAMLKAPNSLNAWEAYHRGLWHMYRFTQAENEQARHFFDKALQLDPTFARAYAGLSFTHWQNAFQRWG
DRDRESALAYESAGHSLLVDDHNPAAHWAMGRALWLRGEQDGSLAELERAVDLSPNFALGHYALSFVHSQSGDPQAAIGS
SDHSRHLSPFDPLLFGMLGSRAMSHVRLGQFEEAAEWALKAAARPNAHTIILAIAAHCLALAGRLDEARGFAAAIRKTLP
DYRADDFIGTFRFDPDAEALFRQGARRIGFS
>Mature_671_residues
MESAPSRLDGDRPRLSVRLLGPLEILRDGVPLALPASRKLRALLAYLALAPHAVGRGRLCELLWDVPNDPRGELRWCLSK
LRAALDTPDRRRVTTQGDAVALDLDGCLVDALEISQAAAQGIATLDVERLQGLAGLFAGDLLDGLELERSPHFDSWLVAQ
RRRFDAYHAAVLEQLAASLPADCDETVSRLDRWIELAPFDTRAHAALLASLARRGEIGAAEQHLASAERLFQSEDLDFAP
LRQAWRSIRDQRASHQAQPAGLPTPSHLVAASGDTGPVEPSHASLAVMPFVDESGARGGLADGFTHDIITRLAKLRDFFV
IARGSVFALAEKAIAPEEAGRKLGVDYVASGTVRSLTGRLIVSVELVEVRTARIVWAETFERRPHDLFAVLDDIGDSIVS
SISAEIETVERNRAMLKAPNSLNAWEAYHRGLWHMYRFTQAENEQARHFFDKALQLDPTFARAYAGLSFTHWQNAFQRWG
DRDRESALAYESAGHSLLVDDHNPAAHWAMGRALWLRGEQDGSLAELERAVDLSPNFALGHYALSFVHSQSGDPQAAIGS
SDHSRHLSPFDPLLFGMLGSRAMSHVRLGQFEEAAEWALKAAARPNAHTIILAIAAHCLALAGRLDEARGFAAAIRKTLP
DYRADDFIGTFRFDPDAEALFRQGARRIGFS

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 73695; Mature: 73695

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESAPSRLDGDRPRLSVRLLGPLEILRDGVPLALPASRKLRALLAYLALAPHAVGRGRLC
CCCCCCCCCCCCCEEEEEEECHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHH
ELLWDVPNDPRGELRWCLSKLRAALDTPDRRRVTTQGDAVALDLDGCLVDALEISQAAAQ
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHC
GIATLDVERLQGLAGLFAGDLLDGLELERSPHFDSWLVAQRRRFDAYHAAVLEQLAASLP
CHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADCDETVSRLDRWIELAPFDTRAHAALLASLARRGEIGAAEQHLASAERLFQSEDLDFAP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHH
LRQAWRSIRDQRASHQAQPAGLPTPSHLVAASGDTGPVEPSHASLAVMPFVDESGARGGL
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCC
ADGFTHDIITRLAKLRDFFVIARGSVFALAEKAIAPEEAGRKLGVDYVASGTVRSLTGRL
CCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHCCCCCCHHHCCCHHHHHCCCE
IVSVELVEVRTARIVWAETFERRPHDLFAVLDDIGDSIVSSISAEIETVERNRAMLKAPN
EEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
SLNAWEAYHRGLWHMYRFTQAENEQARHFFDKALQLDPTFARAYAGLSFTHWQNAFQRWG
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCC
DRDRESALAYESAGHSLLVDDHNPAAHWAMGRALWLRGEQDGSLAELERAVDLSPNFALG
CCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCHHH
HYALSFVHSQSGDPQAAIGSSDHSRHLSPFDPLLFGMLGSRAMSHVRLGQFEEAAEWALK
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AAARPNAHTIILAIAAHCLALAGRLDEARGFAAAIRKTLPDYRADDFIGTFRFDPDAEAL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH
FRQGARRIGFS
HHHHHHHCCCC
>Mature Secondary Structure
MESAPSRLDGDRPRLSVRLLGPLEILRDGVPLALPASRKLRALLAYLALAPHAVGRGRLC
CCCCCCCCCCCCCEEEEEEECHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCCCHHHH
ELLWDVPNDPRGELRWCLSKLRAALDTPDRRRVTTQGDAVALDLDGCLVDALEISQAAAQ
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHC
GIATLDVERLQGLAGLFAGDLLDGLELERSPHFDSWLVAQRRRFDAYHAAVLEQLAASLP
CHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADCDETVSRLDRWIELAPFDTRAHAALLASLARRGEIGAAEQHLASAERLFQSEDLDFAP
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHH
LRQAWRSIRDQRASHQAQPAGLPTPSHLVAASGDTGPVEPSHASLAVMPFVDESGARGGL
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCC
ADGFTHDIITRLAKLRDFFVIARGSVFALAEKAIAPEEAGRKLGVDYVASGTVRSLTGRL
CCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHHCCCCCCHHHCCCHHHHHCCCE
IVSVELVEVRTARIVWAETFERRPHDLFAVLDDIGDSIVSSISAEIETVERNRAMLKAPN
EEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
SLNAWEAYHRGLWHMYRFTQAENEQARHFFDKALQLDPTFARAYAGLSFTHWQNAFQRWG
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCC
DRDRESALAYESAGHSLLVDDHNPAAHWAMGRALWLRGEQDGSLAELERAVDLSPNFALG
CCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCHHH
HYALSFVHSQSGDPQAAIGSSDHSRHLSPFDPLLFGMLGSRAMSHVRLGQFEEAAEWALK
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AAARPNAHTIILAIAAHCLALAGRLDEARGFAAAIRKTLPDYRADDFIGTFRFDPDAEAL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH
FRQGARRIGFS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]