| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473838
Identifier: 13473838
GI number: 13473838
Start: 3627701
End: 3629785
Strand: Reverse
Name: 13473838
Synonym: mll4564
Alternate gene names: NA
Gene position: 3629785-3627701 (Counterclockwise)
Preceding gene: 13473840
Following gene: 13473837
Centisome position: 51.59
GC content: 64.32
Gene sequence:
>2085_bases ATGTCACGAAAATGTGATCGGTCTGACGTAAGGGGTCGAACAGGCAACAAGCTCCAGCCACTCCAAAGCCAGAGGCCCTC CGTGACCGACCATCGCTCCCCCGACACCCGATTCCGCACCAGCCTGCTCGAGGAAAACGACAGTCCGGCCATCAACCCCA CCGACAACCGCACCATGGGCGACATCATCGCCGCGCGGTTCTCGCGCCGGGGATTCCTGAAGGGATCGCTCGCCGTCTCG GCGATCGCCGCGACGGTCGGCCCGCTGGCCATGATCGCCGCCGACGATGCACGCGCCGCGGAAGGCTCGGCCTTCAAATT CGACGAGCTCGAGGCCGGCATCGACGACAAGCATCATGTCGCGCCGGGCTACGACGCCGACGTGCTGTTGCGCTGGGGCG ATCCGCTGTTTGCCGATTCGCCGGAATTCGACCCGACGAAACAGTCGGCTGAGGCGCAGGCCAGGCAGTTCGGCTACAAC AACGACTATGTCGGCTATATCGCGATCGACGGCTCGGCCGAGCACGGCCTGCTCGTGGTCAACCACGAATACACCAACCC GCATCTGATGTTCCCGGGCATCGTTTCGATCGTCGAGAAGGACGGGAAGAAGAAGGCCGAGGTCGCACCGCTCTCGAAGG AGCAGGTCGATGTCGAGATGGCGGCGCATGGCGGCACCATTGTCGAGATCCGCAAGGAGGGAGGCAAATGGCAGGTGGTG CGCGACGGCAAGCGCAACCGCCGCATCACCTCGACCACCGAGATGGCGCTGTCGGGGCCGGTCGCCGGCCATGACCGCGT CAAGACCAATGCCGATCCGTCCGGCACGAAAGTGTTCGGCACGTTCAACAATTGCGCCGGCGGCGTCACGCCGTGGGGCA CGTATGTGATGGCCGAGGAGAACATCCACGGCTATTTCTCCGGCGAACTGCCGGAAGGCCACAAGGAAGCCGCCAATTAC AAGCGGCTCGGCATTCCGGAAGGCGCCTATGAATGGGGCGCGCATTACGACCGCTTCAACCTCGCCAAGGAACCTAACGA GCCCAATCGCTTTGGCTGGATTGTCGAGGTCGACGTCAACGATCCGAATTCGACGCCGAGGAAGCGCACCGCCATGGGCC GCTTCAAGCATGAGGGCGCCGAATCGATCGTCGCCAAGGACGGCCGCGTCGTCTTCTATCTCGGCGACGACGAGCGCTTC GACTATGTCTACAAATTCGTCACCAAGGGCGCCTTCAACGCCAATGACCATGCCGCCAACAAGGACCTGCTCGACGAAGG CACGCTGCATGTCGCCAAATTCGCCGAGGACGGCACGGTCGACTGGCTTCCGATCGTCTTCGGCCAGGGACCGCTGACGG CGGAAAACGGCTTTGGCAGCCAGGCCGACGTGCTGATCGAGACGCGGCGCGCCGCCGATCTGCTCGGCGCCACCAAGATG GACCGGCCCGAGGACATCCAGCCCAATGGTGTCAACGGCAAGGTCTATGTCATGCTGACCAACAATTCGAAGCGCAAGGC CGACCAGGTCGATGCCGCCAACCCGCGCGCCGAAAATGCCTTCGGCCACATCATCGAGATCACCGAGACCAACGGCGATT TCACGGCCACCAAAGGCAAATGGGAAGTGCTTTTGAAATGCGGCGATCCGGCGGTTGCCGATGTCGGCGCCACCTTCTCG ACGGCGACGACGGCCAATGGCTGGTTCGGCATGCCCGACAATTGCGCGGTCGATTCGGCCGGGCGCCTGTGGGTCGCCAC CGACGGCCAGGGCCCGAAGGCCACCGGCCGCACCGACGGCCTGTGGGCGGTCGACACGGAGGGGGCTGCGCGGGCGACAT CAAAACTGTTCTTCCGCGTGCCGATCGGCGCCGAAATGTGCGGCCCGCTGTTTGCGCCCGACGACCAGACCGCCTTCGTC GCGGTCCAGCATCCGGGCGATGGCGGCGAGGATTGGGAAGGCTTTGGCCGCCCGTCCTACTATGAAGACCTGTCAACGCG CTGGCCGGACTTCAAGCCCGAAATGCCGGTGCGGCCGTCGGTCGTCGCCATCACCAAGCAGGGCGGCGGCAAGATCGCGG TCTGA
Upstream 100 bases:
>100_bases CCGTTGCGTTTGTCCTCCAGGACTTTTGCCAGCGCAAGATTGGACCAAAGTCCGATGTCACGGTGACAACCGCCTCGCGC GGAGCTGCGGAGCCGCTATG
Downstream 100 bases:
>100_bases TATCGGGTCCGCAAATATCGAGGGAGGGCTTCGGTTTGCCACCGCCCCTCCTTCGGCGTGAATCTATTCAAGCTCCGGGA AAGATTGGCAATTTACTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MSRKCDRSDVRGRTGNKLQPLQSQRPSVTDHRSPDTRFRTSLLEENDSPAINPTDNRTMGDIIAARFSRRGFLKGSLAVS AIAATVGPLAMIAADDARAAEGSAFKFDELEAGIDDKHHVAPGYDADVLLRWGDPLFADSPEFDPTKQSAEAQARQFGYN NDYVGYIAIDGSAEHGLLVVNHEYTNPHLMFPGIVSIVEKDGKKKAEVAPLSKEQVDVEMAAHGGTIVEIRKEGGKWQVV RDGKRNRRITSTTEMALSGPVAGHDRVKTNADPSGTKVFGTFNNCAGGVTPWGTYVMAEENIHGYFSGELPEGHKEAANY KRLGIPEGAYEWGAHYDRFNLAKEPNEPNRFGWIVEVDVNDPNSTPRKRTAMGRFKHEGAESIVAKDGRVVFYLGDDERF DYVYKFVTKGAFNANDHAANKDLLDEGTLHVAKFAEDGTVDWLPIVFGQGPLTAENGFGSQADVLIETRRAADLLGATKM DRPEDIQPNGVNGKVYVMLTNNSKRKADQVDAANPRAENAFGHIIEITETNGDFTATKGKWEVLLKCGDPAVADVGATFS TATTANGWFGMPDNCAVDSAGRLWVATDGQGPKATGRTDGLWAVDTEGAARATSKLFFRVPIGAEMCGPLFAPDDQTAFV AVQHPGDGGEDWEGFGRPSYYEDLSTRWPDFKPEMPVRPSVVAITKQGGGKIAV
Sequences:
>Translated_694_residues MSRKCDRSDVRGRTGNKLQPLQSQRPSVTDHRSPDTRFRTSLLEENDSPAINPTDNRTMGDIIAARFSRRGFLKGSLAVS AIAATVGPLAMIAADDARAAEGSAFKFDELEAGIDDKHHVAPGYDADVLLRWGDPLFADSPEFDPTKQSAEAQARQFGYN NDYVGYIAIDGSAEHGLLVVNHEYTNPHLMFPGIVSIVEKDGKKKAEVAPLSKEQVDVEMAAHGGTIVEIRKEGGKWQVV RDGKRNRRITSTTEMALSGPVAGHDRVKTNADPSGTKVFGTFNNCAGGVTPWGTYVMAEENIHGYFSGELPEGHKEAANY KRLGIPEGAYEWGAHYDRFNLAKEPNEPNRFGWIVEVDVNDPNSTPRKRTAMGRFKHEGAESIVAKDGRVVFYLGDDERF DYVYKFVTKGAFNANDHAANKDLLDEGTLHVAKFAEDGTVDWLPIVFGQGPLTAENGFGSQADVLIETRRAADLLGATKM DRPEDIQPNGVNGKVYVMLTNNSKRKADQVDAANPRAENAFGHIIEITETNGDFTATKGKWEVLLKCGDPAVADVGATFS TATTANGWFGMPDNCAVDSAGRLWVATDGQGPKATGRTDGLWAVDTEGAARATSKLFFRVPIGAEMCGPLFAPDDQTAFV AVQHPGDGGEDWEGFGRPSYYEDLSTRWPDFKPEMPVRPSVVAITKQGGGKIAV >Mature_693_residues SRKCDRSDVRGRTGNKLQPLQSQRPSVTDHRSPDTRFRTSLLEENDSPAINPTDNRTMGDIIAARFSRRGFLKGSLAVSA IAATVGPLAMIAADDARAAEGSAFKFDELEAGIDDKHHVAPGYDADVLLRWGDPLFADSPEFDPTKQSAEAQARQFGYNN DYVGYIAIDGSAEHGLLVVNHEYTNPHLMFPGIVSIVEKDGKKKAEVAPLSKEQVDVEMAAHGGTIVEIRKEGGKWQVVR DGKRNRRITSTTEMALSGPVAGHDRVKTNADPSGTKVFGTFNNCAGGVTPWGTYVMAEENIHGYFSGELPEGHKEAANYK RLGIPEGAYEWGAHYDRFNLAKEPNEPNRFGWIVEVDVNDPNSTPRKRTAMGRFKHEGAESIVAKDGRVVFYLGDDERFD YVYKFVTKGAFNANDHAANKDLLDEGTLHVAKFAEDGTVDWLPIVFGQGPLTAENGFGSQADVLIETRRAADLLGATKMD RPEDIQPNGVNGKVYVMLTNNSKRKADQVDAANPRAENAFGHIIEITETNGDFTATKGKWEVLLKCGDPAVADVGATFST ATTANGWFGMPDNCAVDSAGRLWVATDGQGPKATGRTDGLWAVDTEGAARATSKLFFRVPIGAEMCGPLFAPDDQTAFVA VQHPGDGGEDWEGFGRPSYYEDLSTRWPDFKPEMPVRPSVVAITKQGGGKIAV
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75420; Mature: 75288
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKCDRSDVRGRTGNKLQPLQSQRPSVTDHRSPDTRFRTSLLEENDSPAINPTDNRTMG CCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH DIIAARFSRRGFLKGSLAVSAIAATVGPLAMIAADDARAAEGSAFKFDELEAGIDDKHHV HHHHHHHHHCCCEEHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEHHHHHCCCCCCCCC APGYDADVLLRWGDPLFADSPEFDPTKQSAEAQARQFGYNNDYVGYIAIDGSAEHGLLVV CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE NHEYTNPHLMFPGIVSIVEKDGKKKAEVAPLSKEQVDVEMAAHGGTIVEIRKEGGKWQVV EECCCCCEEECCHHHHHHHHCCCCCCEECCCCHHHEEEEEECCCCEEEEEEECCCEEEEE RDGKRNRRITSTTEMALSGPVAGHDRVKTNADPSGTKVFGTFNNCAGGVTPWGTYVMAEE ECCCCCCEEECHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEC NIHGYFSGELPEGHKEAANYKRLGIPEGAYEWGAHYDRFNLAKEPNEPNRFGWIVEVDVN CCCEEECCCCCCCHHHHCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC DPNSTPRKRTAMGRFKHEGAESIVAKDGRVVFYLGDDERFDYVYKFVTKGAFNANDHAAN CCCCCCHHHHHHHHHHHCCCHHHEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC KDLLDEGTLHVAKFAEDGTVDWLPIVFGQGPLTAENGFGSQADVLIETRRAADLLGATKM CCHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCC DRPEDIQPNGVNGKVYVMLTNNSKRKADQVDAANPRAENAFGHIIEITETNGDFTATKGK CCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCEEECCCC WEVLLKCGDPAVADVGATFSTATTANGWFGMPDNCAVDSAGRLWVATDGQGPKATGRTDG EEEEEEECCCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC LWAVDTEGAARATSKLFFRVPIGAEMCGPLFAPDDQTAFVAVQHPGDGGEDWEGFGRPSY EEEEECCCCHHCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHH YEDLSTRWPDFKPEMPVRPSVVAITKQGGGKIAV HHHHHHCCCCCCCCCCCCCCEEEEEECCCCEECC >Mature Secondary Structure SRKCDRSDVRGRTGNKLQPLQSQRPSVTDHRSPDTRFRTSLLEENDSPAINPTDNRTMG CCCCCCHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH DIIAARFSRRGFLKGSLAVSAIAATVGPLAMIAADDARAAEGSAFKFDELEAGIDDKHHV HHHHHHHHHCCCEEHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEHHHHHCCCCCCCCC APGYDADVLLRWGDPLFADSPEFDPTKQSAEAQARQFGYNNDYVGYIAIDGSAEHGLLVV CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEE NHEYTNPHLMFPGIVSIVEKDGKKKAEVAPLSKEQVDVEMAAHGGTIVEIRKEGGKWQVV EECCCCCEEECCHHHHHHHHCCCCCCEECCCCHHHEEEEEECCCCEEEEEEECCCEEEEE RDGKRNRRITSTTEMALSGPVAGHDRVKTNADPSGTKVFGTFNNCAGGVTPWGTYVMAEE ECCCCCCEEECHHHHEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEC NIHGYFSGELPEGHKEAANYKRLGIPEGAYEWGAHYDRFNLAKEPNEPNRFGWIVEVDVN CCCEEECCCCCCCHHHHCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC DPNSTPRKRTAMGRFKHEGAESIVAKDGRVVFYLGDDERFDYVYKFVTKGAFNANDHAAN CCCCCCHHHHHHHHHHHCCCHHHEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC KDLLDEGTLHVAKFAEDGTVDWLPIVFGQGPLTAENGFGSQADVLIETRRAADLLGATKM CCHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCC DRPEDIQPNGVNGKVYVMLTNNSKRKADQVDAANPRAENAFGHIIEITETNGDFTATKGK CCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCEEECCCC WEVLLKCGDPAVADVGATFSTATTANGWFGMPDNCAVDSAGRLWVATDGQGPKATGRTDG EEEEEEECCCCHHHCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC LWAVDTEGAARATSKLFFRVPIGAEMCGPLFAPDDQTAFVAVQHPGDGGEDWEGFGRPSY EEEEECCCCHHCCEEEEEEECCCHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHH YEDLSTRWPDFKPEMPVRPSVVAITKQGGGKIAV HHHHHHCCCCCCCCCCCCCCEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA