| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473501
Identifier: 13473501
GI number: 13473501
Start: 3299067
End: 3299660
Strand: Direct
Name: 13473501
Synonym: mlr4119
Alternate gene names: NA
Gene position: 3299067-3299660 (Clockwise)
Preceding gene: 13473500
Following gene: 13473508
Centisome position: 46.89
GC content: 62.12
Gene sequence:
>594_bases ATGCGTGCCATTCTGATCCCGCTTGCGCTTGCCGGCCTGTGTCAGGTGGCGCGTGCCGGTGACATATCCAGCGCCTATAC CGACCTCGATTCGAAGAAGGATTGCGTGACCTATGCGCAGGCCGCAGAAGGCGATGGCGACTGGGCCGATCTTGCCTGTT CGGGTTATCGCGGCTATCCCGTGCTCATCGCCTATGACGACGCCCGTGAATCGCTGTTCTACGGTTTTCCGCCTGGCGGC GACATGACGTCCGTCTGGGAGAGTTTTTCAGGCTTCAATTCGTCCGCGGCCAAGGTTGAATGGCGCATCGAAACCAATGG CGACAAGGCCGTGCCCTTCGCGGTCATCCACCGTCGTACGATCAGCAGTGCCGAGGATCAGGACAAGCCGACCGACGTGC TGCTTGTCGCCAAGGTCGGCCAGATGGACGCGCGGGAAAGCTGCACCATCGGCCTTGTCCAGGCCACCGGCAACCCGCAA GCCAACGATCAGGCGCGAAAACTCGCCGACGAGAAGGCCCGTACCTTCGCCTGCGGCAAGGACCGGCACACCGTCATCGG CAATGTGCCGGCTTTCGGCCGGGTGGATAACTGA
Upstream 100 bases:
>100_bases CGCAGTCGGTGGCGACGAACGCCGATCTGCTGATCGAAGCGAGCTTGAAGAAATAGCGTTTGGCGATACGTTGCTCCGGC CCGAACCGGAGATTGTCGTT
Downstream 100 bases:
>100_bases CCGCTCGGACTACTTGCCCTTCTTCGCCCGCTCGATCGCGTCGACGATCATCTTCTTGGCATATTTGGAATCGTGCCAGC CCTCGATCTTGACCCATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYPVLIAYDDARESLFYGFPPGG DMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRTISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQ ANDQARKLADEKARTFACGKDRHTVIGNVPAFGRVDN
Sequences:
>Translated_197_residues MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYPVLIAYDDARESLFYGFPPGG DMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRTISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQ ANDQARKLADEKARTFACGKDRHTVIGNVPAFGRVDN >Mature_197_residues MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYPVLIAYDDARESLFYGFPPGG DMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRTISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQ ANDQARKLADEKARTFACGKDRHTVIGNVPAFGRVDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21172; Mature: 21172
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYP CCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEHEEECCCCCCE VLIAYDDARESLFYGFPPGGDMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRT EEEEECCCCCCEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQANDQARKLADEKARTFACGK HCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHEEECCC DRHTVIGNVPAFGRVDN CCCEEEECCCCCCCCCC >Mature Secondary Structure MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYP CCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEHEEECCCCCCE VLIAYDDARESLFYGFPPGGDMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRT EEEEECCCCCCEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQANDQARKLADEKARTFACGK HCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHEEECCC DRHTVIGNVPAFGRVDN CCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA