Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473501

Identifier: 13473501

GI number: 13473501

Start: 3299067

End: 3299660

Strand: Direct

Name: 13473501

Synonym: mlr4119

Alternate gene names: NA

Gene position: 3299067-3299660 (Clockwise)

Preceding gene: 13473500

Following gene: 13473508

Centisome position: 46.89

GC content: 62.12

Gene sequence:

>594_bases
ATGCGTGCCATTCTGATCCCGCTTGCGCTTGCCGGCCTGTGTCAGGTGGCGCGTGCCGGTGACATATCCAGCGCCTATAC
CGACCTCGATTCGAAGAAGGATTGCGTGACCTATGCGCAGGCCGCAGAAGGCGATGGCGACTGGGCCGATCTTGCCTGTT
CGGGTTATCGCGGCTATCCCGTGCTCATCGCCTATGACGACGCCCGTGAATCGCTGTTCTACGGTTTTCCGCCTGGCGGC
GACATGACGTCCGTCTGGGAGAGTTTTTCAGGCTTCAATTCGTCCGCGGCCAAGGTTGAATGGCGCATCGAAACCAATGG
CGACAAGGCCGTGCCCTTCGCGGTCATCCACCGTCGTACGATCAGCAGTGCCGAGGATCAGGACAAGCCGACCGACGTGC
TGCTTGTCGCCAAGGTCGGCCAGATGGACGCGCGGGAAAGCTGCACCATCGGCCTTGTCCAGGCCACCGGCAACCCGCAA
GCCAACGATCAGGCGCGAAAACTCGCCGACGAGAAGGCCCGTACCTTCGCCTGCGGCAAGGACCGGCACACCGTCATCGG
CAATGTGCCGGCTTTCGGCCGGGTGGATAACTGA

Upstream 100 bases:

>100_bases
CGCAGTCGGTGGCGACGAACGCCGATCTGCTGATCGAAGCGAGCTTGAAGAAATAGCGTTTGGCGATACGTTGCTCCGGC
CCGAACCGGAGATTGTCGTT

Downstream 100 bases:

>100_bases
CCGCTCGGACTACTTGCCCTTCTTCGCCCGCTCGATCGCGTCGACGATCATCTTCTTGGCATATTTGGAATCGTGCCAGC
CCTCGATCTTGACCCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYPVLIAYDDARESLFYGFPPGG
DMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRTISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQ
ANDQARKLADEKARTFACGKDRHTVIGNVPAFGRVDN

Sequences:

>Translated_197_residues
MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYPVLIAYDDARESLFYGFPPGG
DMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRTISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQ
ANDQARKLADEKARTFACGKDRHTVIGNVPAFGRVDN
>Mature_197_residues
MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYPVLIAYDDARESLFYGFPPGG
DMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRTISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQ
ANDQARKLADEKARTFACGKDRHTVIGNVPAFGRVDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21172; Mature: 21172

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYP
CCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEHEEECCCCCCE
VLIAYDDARESLFYGFPPGGDMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRT
EEEEECCCCCCEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
ISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQANDQARKLADEKARTFACGK
HCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHEEECCC
DRHTVIGNVPAFGRVDN
CCCEEEECCCCCCCCCC
>Mature Secondary Structure
MRAILIPLALAGLCQVARAGDISSAYTDLDSKKDCVTYAQAAEGDGDWADLACSGYRGYP
CCEEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEHEEECCCCCCE
VLIAYDDARESLFYGFPPGGDMTSVWESFSGFNSSAAKVEWRIETNGDKAVPFAVIHRRT
EEEEECCCCCCEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
ISSAEDQDKPTDVLLVAKVGQMDARESCTIGLVQATGNPQANDQARKLADEKARTFACGK
HCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHEEECCC
DRHTVIGNVPAFGRVDN
CCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA