| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473490
Identifier: 13473490
GI number: 13473490
Start: 3289318
End: 3289881
Strand: Direct
Name: 13473490
Synonym: mlr4105
Alternate gene names: NA
Gene position: 3289318-3289881 (Clockwise)
Preceding gene: 13473487
Following gene: 13473491
Centisome position: 46.75
GC content: 62.77
Gene sequence:
>564_bases ATGACCGGCAAAATTTCAGCGCTTGATCTGGCCTCGGGAGAGCTGAGCGAGCCGACAAAGGCCTATTTCGCCAAATGCGA GGAGAAGCTCGGCCTGGTTCCCAACGTGCTCAAGGCCTATGCCTTCGACGACAAGAAACTGCGCGCCTTCACCGACATCT ACAACGATCTGATGCTGGGCGAGTCCGGCCTGTCGAAGCTGGACCGGGAGATGATCGCCGTTGCAGTCTCCTCCATCAAC CATTGCTACTACTGCCTGACCGCGCATGGCGCCGCGGTGCGCCAGCTGTCGGGCGACCCGGCGCTCGGCGAGATGCTGGT GATGAATTTCCGCGCCGCCGATCTTTCGCCGAGGCAGACCGCGATGCTCGAATTCGCCGTCAAGCTGACCGAGGAGCCGG CCAAGATCGTCGAGGCCGACCGGGCGGCCCTGCGCAAGGCCGGCTTCAGCGACCGCGACATCTGGGACATCGCCTCGACA GCGGCCTTCTTCAACATGTCGAACCGGGTGGCCGCGGCAATCGACATGCGGCCGAACGACGAATATCATGCCATGGCGCG TTGA
Upstream 100 bases:
>100_bases ATCGTAGCAGATGACCGCTGTTTGGCGACAAAGGTTTGACGGCTTGCCAAGAAATATCGGAATTCGGCTGCGGCACATCG TGACGAGGAGAAAATGACCC
Downstream 100 bases:
>100_bases GGCTCGGCAGGGGACCTCGCCTTATATTAGCCACCCCTCATTTCCGTTGCGTGTTTGCCGGTTTGGTCCGATGATCGGCA GGCGGCATGACCGCATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Peroxidase-Like Protein; Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Core; Peroxidase-Like; Peroxidase Family Protein; Alkylhydroperoxidase AhpD Domain Protein; 4-Carboxymuconolactone Decarboxylase; Peroxidase; Peroxidase-Related Subfamily; Alkylhydroperoxidase Like Protein AhpD Family; Carboxymuconolactone Decarboxylase Family; Carboxymuconolactone Decarboxylase Family Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; Peroxidase Related Protein; Alkylhydroperoxidase Ahpd Family Core Domain; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Alkylhydroperoxidase-Like Protein AhpD Family; Carboxymuconolactone Decarboxylase; Peroxidase-Related Protein
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MTGKISALDLASGELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSIN HCYYCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIAST AAFFNMSNRVAAAIDMRPNDEYHAMAR
Sequences:
>Translated_187_residues MTGKISALDLASGELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSIN HCYYCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIAST AAFFNMSNRVAAAIDMRPNDEYHAMAR >Mature_186_residues TGKISALDLASGELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINH CYYCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIASTA AFFNMSNRVAAAIDMRPNDEYHAMAR
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20535; Mature: 20404
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKISALDLASGELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLG CCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHC ESGLSKLDREMIAVAVSSINHCYYCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQT CHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHH AMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIASTAAFFNMSNRVAAAIDMRPND HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC EYHAMAR CCCCCCC >Mature Secondary Structure TGKISALDLASGELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLG CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHC ESGLSKLDREMIAVAVSSINHCYYCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQT CHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCCCHHHH AMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIASTAAFFNMSNRVAAAIDMRPND HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC EYHAMAR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA