| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yxiO [H]
Identifier: 13473488
GI number: 13473488
Start: 3282650
End: 3284026
Strand: Reverse
Name: yxiO [H]
Synonym: mll4103
Alternate gene names: 13473488
Gene position: 3284026-3282650 (Counterclockwise)
Preceding gene: 13473489
Following gene: 13473483
Centisome position: 46.67
GC content: 65.58
Gene sequence:
>1377_bases ATGACCGAGGTAGCAGTGCAGCGGGCGTCCGGGCGCGGCATCTGGGGATGGATGTTTTTCGACTGGGCGGCGCAGCCGTT CTTCACGGTCGTCACCACCTTCATCTTCGGTCCGTATTTCGTCTCGCGCATGGCTGGCGATCCCAACACCGGCCAGGCGG TCTGGGGCTACGGCATCGCCGCGGCAGGGCTGGTCATCGCCGTGCTGTCACCGATCCTCGGTTCGATCGCCGACCAGACC GGGCCGCGCAAGCCGTGGATCGCTTTCTTCGCCGCGATCAAGATCACCAGTCTCGCTTTGCTCTGGTTTGCGGCACCCGG CTCGAACCTGTTCCTGGTCGTGGCGCTGTTTTCGCTGGCTTCGGTGGCGGCCGAATTTTCCACCGTCTTCAACGATTCGA TGATGCCGCGGCTGGTGCCAAAGAGCGAGATCGGCCGCATCTCCAACACGGCCTGGGGGCTCGGCTATCTCGGCGGCATG ATCGCGCTGATCTTCGTCGTCACCTGCCTCGCCGGCTCGCCGGAGACCGGCAAGACGATCATCGGCATCGACCCGCTGTT CGGGCTCGACCCGAAACTCGGCGAGGACGCGCGCGCCACCGGGCCGCTGTCGGCCGGCTGGTATTTCCTGTTCATCCTGC CGATGTTCTTCTTCACGCCAGACGCCATCAAGGGCATCCCGATCGGGCCGGCGGTGCGCGAGGGCCTGCTGGAACTGAAA TCGACGCTGGCCGAAGTGCGCAGGCGCGGCGGCATCTTCCGTTTCCTCGTCGCCCGCATGATCTACCAGGACGGCGTCAA CGCGCTGCTGGCGCTCGGCGGCACTTTCGCGGCGGGCATGTTCCATTGGTCGATCACCGAGATCGGCATGTTCGGCATCA TCCTCAATGTCGTCGCCATCTTCGGCTGCTGGATCGCGGCACGCCTCGATACCGCACTTGGCTCCAAGGCGGTGGTGATG ATCGCGCTGGTCATGCTGTCGATAGCGACCATAGGCATCATCTCGACGGGGCCGGGCTTTACGCTGCTGGGCCTGATCCA GCTGCCGACCACCGATTCGGGCGGCCTGTTCGGCACGGCCGCCGAGAAGGCCTATATCCTCTACGGCCTGTTGATCGGCC TGGCTTTCGGCCCGGTGCAGGCGTCTTCGCGCTCCTACATGGCGCGCAGCGTGACAGCGGCGGAATCCGGCCGCTATTTC GGCATCTACGCGCTGGCCGGACGTGCGACCAGCTTCCTGGCGCCGTTCCTGGTGGCGACCATCACCGCGCTGAGCGATTC GGCGCGCCTCGGCATGGCGGTGATCATCCTGTTCCTCGGCATCGGCATGGCGATCCTGGTCAGGACGCCCTATCCGGCGG ATCGGCCGGCGGAGTAG
Upstream 100 bases:
>100_bases GGAGGTAGGGGTTGGCGCCCGCGACGCTTGTCATTTGCATGACCCAGGGAAAACATGCAGACATGGCGCCGCCGACGAAA CGCAGGCGAGTGGAGGTGAA
Downstream 100 bases:
>100_bases CTCCACTTTCCCTTCTCCCACAGGGGGAGAAGGAAGAGGGCGCTCAGTGCCGGAAATGCCTCACGCCCGTAAACACCATC GCAATGCCGTGTTCATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTEVAVQRASGRGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRMAGDPNTGQAVWGYGIAAAGLVIAVLSPILGSIADQT GPRKPWIAFFAAIKITSLALLWFAAPGSNLFLVVALFSLASVAAEFSTVFNDSMMPRLVPKSEIGRISNTAWGLGYLGGM IALIFVVTCLAGSPETGKTIIGIDPLFGLDPKLGEDARATGPLSAGWYFLFILPMFFFTPDAIKGIPIGPAVREGLLELK STLAEVRRRGGIFRFLVARMIYQDGVNALLALGGTFAAGMFHWSITEIGMFGIILNVVAIFGCWIAARLDTALGSKAVVM IALVMLSIATIGIISTGPGFTLLGLIQLPTTDSGGLFGTAAEKAYILYGLLIGLAFGPVQASSRSYMARSVTAAESGRYF GIYALAGRATSFLAPFLVATITALSDSARLGMAVIILFLGIGMAILVRTPYPADRPAE
Sequences:
>Translated_458_residues MTEVAVQRASGRGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRMAGDPNTGQAVWGYGIAAAGLVIAVLSPILGSIADQT GPRKPWIAFFAAIKITSLALLWFAAPGSNLFLVVALFSLASVAAEFSTVFNDSMMPRLVPKSEIGRISNTAWGLGYLGGM IALIFVVTCLAGSPETGKTIIGIDPLFGLDPKLGEDARATGPLSAGWYFLFILPMFFFTPDAIKGIPIGPAVREGLLELK STLAEVRRRGGIFRFLVARMIYQDGVNALLALGGTFAAGMFHWSITEIGMFGIILNVVAIFGCWIAARLDTALGSKAVVM IALVMLSIATIGIISTGPGFTLLGLIQLPTTDSGGLFGTAAEKAYILYGLLIGLAFGPVQASSRSYMARSVTAAESGRYF GIYALAGRATSFLAPFLVATITALSDSARLGMAVIILFLGIGMAILVRTPYPADRPAE >Mature_457_residues TEVAVQRASGRGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRMAGDPNTGQAVWGYGIAAAGLVIAVLSPILGSIADQTG PRKPWIAFFAAIKITSLALLWFAAPGSNLFLVVALFSLASVAAEFSTVFNDSMMPRLVPKSEIGRISNTAWGLGYLGGMI ALIFVVTCLAGSPETGKTIIGIDPLFGLDPKLGEDARATGPLSAGWYFLFILPMFFFTPDAIKGIPIGPAVREGLLELKS TLAEVRRRGGIFRFLVARMIYQDGVNALLALGGTFAAGMFHWSITEIGMFGIILNVVAIFGCWIAARLDTALGSKAVVMI ALVMLSIATIGIISTGPGFTLLGLIQLPTTDSGGLFGTAAEKAYILYGLLIGLAFGPVQASSRSYMARSVTAAESGRYFG IYALAGRATSFLAPFLVATITALSDSARLGMAVIILFLGIGMAILVRTPYPADRPAE
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48511; Mature: 48380
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVAVQRASGRGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRMAGDPNTGQAVWGYGIA CCCHHHHHCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AAGLVIAVLSPILGSIADQTGPRKPWIAFFAAIKITSLALLWFAAPGSNLFLVVALFSLA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH SVAAEFSTVFNDSMMPRLVPKSEIGRISNTAWGLGYLGGMIALIFVVTCLAGSPETGKTI HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IGIDPLFGLDPKLGEDARATGPLSAGWYFLFILPMFFFTPDAIKGIPIGPAVREGLLELK EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH STLAEVRRRGGIFRFLVARMIYQDGVNALLALGGTFAAGMFHWSITEIGMFGIILNVVAI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGCWIAARLDTALGSKAVVMIALVMLSIATIGIISTGPGFTLLGLIQLPTTDSGGLFGTA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECH AEKAYILYGLLIGLAFGPVQASSRSYMARSVTAAESGRYFGIYALAGRATSFLAPFLVAT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH ITALSDSARLGMAVIILFLGIGMAILVRTPYPADRPAE HHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC >Mature Secondary Structure TEVAVQRASGRGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRMAGDPNTGQAVWGYGIA CCHHHHHCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH AAGLVIAVLSPILGSIADQTGPRKPWIAFFAAIKITSLALLWFAAPGSNLFLVVALFSLA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH SVAAEFSTVFNDSMMPRLVPKSEIGRISNTAWGLGYLGGMIALIFVVTCLAGSPETGKTI HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IGIDPLFGLDPKLGEDARATGPLSAGWYFLFILPMFFFTPDAIKGIPIGPAVREGLLELK EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH STLAEVRRRGGIFRFLVARMIYQDGVNALLALGGTFAAGMFHWSITEIGMFGIILNVVAI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGCWIAARLDTALGSKAVVMIALVMLSIATIGIISTGPGFTLLGLIQLPTTDSGGLFGTA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEECH AEKAYILYGLLIGLAFGPVQASSRSYMARSVTAAESGRYFGIYALAGRATSFLAPFLVAT HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH ITALSDSARLGMAVIILFLGIGMAILVRTPYPADRPAE HHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]