Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473436

Identifier: 13473436

GI number: 13473436

Start: 3223612

End: 3224556

Strand: Reverse

Name: 13473436

Synonym: msl8646

Alternate gene names: NA

Gene position: 3224556-3223612 (Counterclockwise)

Preceding gene: 13473437

Following gene: 13473434

Centisome position: 45.83

GC content: 53.86

Gene sequence:

>945_bases
ATGCCGACGCTTCTCTCCCTTGAGTCGCTCGAAAGCGACCGGCAGTTTGTTGAGCGTCAGCGGAACGAGGCCGGCCAAGG
AGCTTGGGGGACCTCCCGCTTAATGTGGGAAAATAGGCTTCGTGAGCTCGATCTGCGAATTGCTGAGTTGAAAGCCAAGA
GCAATAGCTACGCCAGTGTGGCACTGATCTTTGATGGTTTGCCAGTGATCGGGCAAGGAGACATACGGCTCGATTTTTCG
ACGGACGCCCTGAATAGCTATCAGAGGATGATTTCGGTCGCGCTTGCGTCCCAGGCTGGCGAGGATCTCCCTGAGCGCGG
CCCGATTAAGGGGGCAGGCAAGGGTAAGCTTTTCATTCGGGACCTGGTGAGAGGGTCCATGGGTTTCATGCTTGAGGAAA
TCGCACCAGATCAGCACGAACTTGTCGCCACCCCGCTGAAGCAGGCTGTGGAAAGTGCCACAGCGCTAATTGGAGCAATG
ACGAACGAGCAGTCAGATGAAACTTTCGACGACATTCTCGCAAACACGCAGCCGCGAATGATTGCGGCCGTGCAAAGGTT
TACAAAAGTTTTGCAGGAAGCTGGCGCTAGCACCCGTATTGTTGGAGATGAGCACGCTCTCGCTCTGACAAATGCAGACG
TCGGCATTCTCTACGAGCGCTTGAATGCGGTCGAGGTCACCGAGGAAACAGAATTGGTCGAAGGGACCCTCTTAGGTATA
TTGCCCGACGCTCACCAATTTGAATTGAGGCTTCAGGGTGATGCGGGGACGCTGAAGGGCAATGTCGCAGACGACCTTGC
GGTTAAATACCTTGCCGATTTGCAGTTCAAGGATACACTACTCCTTAAGCCAGTACGAGCATCGATCACTTATATCCGGA
CGTCTCGCAACGGAAAATTGATCAAGGAACACAAGCTCCTCCAGAACCTGGTTCCACTGGTCTAA

Upstream 100 bases:

>100_bases
TTTCGCATCAGAGAGACACCTTTGCCTGGAAAGGGTTTCTTGCAATCGTGGTAGACCCTGCCTCAGATCAGGCAGCCGCC
GCCATGCTAGGGGAGGCATA

Downstream 100 bases:

>100_bases
GGCCAAAAGCTATAGCCGAGGTATCAGTGTTGTCAGGCGGACTCCGCTATGAGCCTATAGACGCTGGCGCGCCCTATCTT
CAATTCCCTGGCTATCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASVALIFDGLPVIGQGDIRLDFS
TDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIRDLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAM
TNEQSDETFDDILANTQPRMIAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI
LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKLIKEHKLLQNLVPLV

Sequences:

>Translated_314_residues
MPTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASVALIFDGLPVIGQGDIRLDFS
TDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIRDLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAM
TNEQSDETFDDILANTQPRMIAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI
LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKLIKEHKLLQNLVPLV
>Mature_313_residues
PTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASVALIFDGLPVIGQGDIRLDFST
DALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIRDLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAMT
NEQSDETFDDILANTQPRMIAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGIL
PDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKLIKEHKLLQNLVPLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34509; Mature: 34378

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
ALIFDGLPVIGQGDIRLDFSTDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIR
EEEECCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAMTNEQSDETFDDILANTQPRM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHH
IAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI
HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHCHHEECCHHHHHHHHEEEE
LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKL
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEECHHHHEEEEEEECCCCCH
IKEHKLLQNLVPLV
HHHHHHHHHHHCCC
>Mature Secondary Structure 
PTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
ALIFDGLPVIGQGDIRLDFSTDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIR
EEEECCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
DLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAMTNEQSDETFDDILANTQPRM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHH
IAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI
HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHCHHEECCHHHHHHHHEEEE
LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKL
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEECHHHHEEEEEEECCCCCH
IKEHKLLQNLVPLV
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA