| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473436
Identifier: 13473436
GI number: 13473436
Start: 3223612
End: 3224556
Strand: Reverse
Name: 13473436
Synonym: msl8646
Alternate gene names: NA
Gene position: 3224556-3223612 (Counterclockwise)
Preceding gene: 13473437
Following gene: 13473434
Centisome position: 45.83
GC content: 53.86
Gene sequence:
>945_bases ATGCCGACGCTTCTCTCCCTTGAGTCGCTCGAAAGCGACCGGCAGTTTGTTGAGCGTCAGCGGAACGAGGCCGGCCAAGG AGCTTGGGGGACCTCCCGCTTAATGTGGGAAAATAGGCTTCGTGAGCTCGATCTGCGAATTGCTGAGTTGAAAGCCAAGA GCAATAGCTACGCCAGTGTGGCACTGATCTTTGATGGTTTGCCAGTGATCGGGCAAGGAGACATACGGCTCGATTTTTCG ACGGACGCCCTGAATAGCTATCAGAGGATGATTTCGGTCGCGCTTGCGTCCCAGGCTGGCGAGGATCTCCCTGAGCGCGG CCCGATTAAGGGGGCAGGCAAGGGTAAGCTTTTCATTCGGGACCTGGTGAGAGGGTCCATGGGTTTCATGCTTGAGGAAA TCGCACCAGATCAGCACGAACTTGTCGCCACCCCGCTGAAGCAGGCTGTGGAAAGTGCCACAGCGCTAATTGGAGCAATG ACGAACGAGCAGTCAGATGAAACTTTCGACGACATTCTCGCAAACACGCAGCCGCGAATGATTGCGGCCGTGCAAAGGTT TACAAAAGTTTTGCAGGAAGCTGGCGCTAGCACCCGTATTGTTGGAGATGAGCACGCTCTCGCTCTGACAAATGCAGACG TCGGCATTCTCTACGAGCGCTTGAATGCGGTCGAGGTCACCGAGGAAACAGAATTGGTCGAAGGGACCCTCTTAGGTATA TTGCCCGACGCTCACCAATTTGAATTGAGGCTTCAGGGTGATGCGGGGACGCTGAAGGGCAATGTCGCAGACGACCTTGC GGTTAAATACCTTGCCGATTTGCAGTTCAAGGATACACTACTCCTTAAGCCAGTACGAGCATCGATCACTTATATCCGGA CGTCTCGCAACGGAAAATTGATCAAGGAACACAAGCTCCTCCAGAACCTGGTTCCACTGGTCTAA
Upstream 100 bases:
>100_bases TTTCGCATCAGAGAGACACCTTTGCCTGGAAAGGGTTTCTTGCAATCGTGGTAGACCCTGCCTCAGATCAGGCAGCCGCC GCCATGCTAGGGGAGGCATA
Downstream 100 bases:
>100_bases GGCCAAAAGCTATAGCCGAGGTATCAGTGTTGTCAGGCGGACTCCGCTATGAGCCTATAGACGCTGGCGCGCCCTATCTT CAATTCCCTGGCTATCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASVALIFDGLPVIGQGDIRLDFS TDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIRDLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAM TNEQSDETFDDILANTQPRMIAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKLIKEHKLLQNLVPLV
Sequences:
>Translated_314_residues MPTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASVALIFDGLPVIGQGDIRLDFS TDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIRDLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAM TNEQSDETFDDILANTQPRMIAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKLIKEHKLLQNLVPLV >Mature_313_residues PTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASVALIFDGLPVIGQGDIRLDFST DALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIRDLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAMT NEQSDETFDDILANTQPRMIAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGIL PDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKLIKEHKLLQNLVPLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34509; Mature: 34378
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASV CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ALIFDGLPVIGQGDIRLDFSTDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIR EEEECCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH DLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAMTNEQSDETFDDILANTQPRM HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHH IAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHCHHEECCHHHHHHHHEEEE LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKL CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEECHHHHEEEEEEECCCCCH IKEHKLLQNLVPLV HHHHHHHHHHHCCC >Mature Secondary Structure PTLLSLESLESDRQFVERQRNEAGQGAWGTSRLMWENRLRELDLRIAELKAKSNSYASV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ALIFDGLPVIGQGDIRLDFSTDALNSYQRMISVALASQAGEDLPERGPIKGAGKGKLFIR EEEECCCCEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH DLVRGSMGFMLEEIAPDQHELVATPLKQAVESATALIGAMTNEQSDETFDDILANTQPRM HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHH IAAVQRFTKVLQEAGASTRIVGDEHALALTNADVGILYERLNAVEVTEETELVEGTLLGI HHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHCHHEECCHHHHHHHHEEEE LPDAHQFELRLQGDAGTLKGNVADDLAVKYLADLQFKDTLLLKPVRASITYIRTSRNGKL CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHEECHHHHEEEEEEECCCCCH IKEHKLLQNLVPLV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA