Click here to switch to the map view.

The map label for this gene is 13473430

Identifier: 13473430

GI number: 13473430

Start: 3216483

End: 3218159

Strand: Direct

Name: 13473430

Synonym: mlr4028

Alternate gene names: NA

Gene position: 3216483-3218159 (Clockwise)

Preceding gene: 13473429

Following gene: 13473435

Centisome position: 45.71

GC content: 55.46

Gene sequence:

>1677_bases
ATGAGAAACCGATTGCCGCCCGCTTGGGCAAAGCACCTCAAAACTCAACCATCGGTTAAGGTGGCAATGCCGAAGGCCAC
ACTGCCGAAAGCCCAGCCAAACGCCAGCCCGCCCCGCAGCCAGGCTGATGACATGCTGTTGAGACAGGCTCTCGAGCTAC
AGCAGGCTAAGCGACTGCCTGAGGCAGAGGAACTTTGCCTTCGCGTCCTTGCACGTACGCCAAACCATCCGCTGGCTTAT
TATATCCTGGGTACCCTCGGCATTGGATACGACAACGAGAAGGCCTTGCGGTATTTCGCTCGGGCGGTGGCAGAAGAGCC
TCAAAATCCCTACTATCACCTTAGCCTTGGTGAGACCTATTTAAAAGTCAGCGAATTCACACCGGCGATCAGGCACATTC
AGCAGGCCCTTGATTTGAAGCCGGATCTGGTGGAAGCGCTCTGCGCCTTGGGCGATGCTTACAATGAGTTTGACAAGGGG
GAATTGGCACTGCCGCTGTTCGAAAAGGCGCTCAAGATTGACCGATATCATCCTCTGGCCCGATTGGGGCTGCCCTACGC
TCTCGCAAGTCTCGGTCGCATGGACGAAGCTGCGGTTCTTTTGAAAGAGGCGATAGACCGGCGCATCGCGTTACCGACCG
CTTACGGTGCACTTGTACAAACGCGCAACTTCACCGAAGAGCCCCCCGAACTAGAGTCGATCTTGGCGGAGCTTCGAGAC
CCGGATCTTGGATCGGAAGACGCATCGGCGCTCCATCACGCCGCCGGAAAAGTGCTCAACGACCTCGGCCGTTACAAGGA
GGCGATGGTTCACTACAAGAAAGGGAATCAAGCCGGGGGTCATAAGTTCGATCTGGAAAACTATCGTCGCTGGATCGATG
CCATGATCGAAACCTTCACCCCGGAACTGTTCGCTTCAAGGGCCGCTTACGGCAATCCCTCGGACGCGCCTGTATTTGTT
GTTGGCATGCCTCGCTCGGGCACGACGCTGACCGAGCAGATCTGCGCCAGCCATCCCAATGTTCACGGGGCCGGCGAGCT
CGGCAAGCTCAGACGGGTCGCCAATGGGATCGGCCTCGCGAACCGCTCCAACACGAATTTCGCCGAATCAATCGCGACGT
TTACTCCCGATCTGACTAGGGCTTTGGCCGGGGAGCACCTTGCCTATCTGCGCGAGCGGGCTCCAGATGCGCTTCGAATC
GTCGACAAGATGCCTCACAATTTCGAGCTGATTGGCCTGATTGGCATTCTCTTTCCCAACGCGCGTATCATTCATTGTCG
CCGCGATGCCATAGACAATTGCATCTCCTGTTTCGTCCTGCGGTTCAATGAAGCGCACAGCTACAGCGCCGACCTGCAGA
CTCTCGGGCTCTATTACAGGGAATATGACCGTTTGATGCGACACTGGAACAAGGTTCTACCAGGCCGCATCTTCGAAAAT
CGCTATGAGGCGTTGATTGAAAATCAGGAGCAACAATCGCGCCGTCTCATAGATTATCTCGGGCTGCCTTGGGATGATGC
CTGTCTGCGCTTTTTTGATAGAGAGGGTTCTGTAAATACTTATAGTCGCTGGCAGGTTCGCCAGCCGATCTACACATCGT
CGATTAAGCGCTGGAGAAATTATGAAAGCGAAATCCAGTCTCTGATCGAATCGTTGGGCGATCTTGCCGAGACCTAA

Upstream 100 bases:

>100_bases
AAGTTTGTTAGGTGCGCACACCATCAGTACAGCTTGCCCATCACGCCTTGACAGCACTCCTCGACTGGATTCTTCCTGTC
GATTTTGTTAGCAAGACGGA

Downstream 100 bases:

>100_bases
CCGGTAGCTTCGGAGATTGGTCGGCCTTCTGGCCTGCCCCAATTCGCGTCCGACGGCCTGGCCCCCAGCAAAGCGCAACC
TGATAAGTCGTGACTCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MRNRLPPAWAKHLKTQPSVKVAMPKATLPKAQPNASPPRSQADDMLLRQALELQQAKRLPEAEELCLRVLARTPNHPLAY
YILGTLGIGYDNEKALRYFARAVAEEPQNPYYHLSLGETYLKVSEFTPAIRHIQQALDLKPDLVEALCALGDAYNEFDKG
ELALPLFEKALKIDRYHPLARLGLPYALASLGRMDEAAVLLKEAIDRRIALPTAYGALVQTRNFTEEPPELESILAELRD
PDLGSEDASALHHAAGKVLNDLGRYKEAMVHYKKGNQAGGHKFDLENYRRWIDAMIETFTPELFASRAAYGNPSDAPVFV
VGMPRSGTTLTEQICASHPNVHGAGELGKLRRVANGIGLANRSNTNFAESIATFTPDLTRALAGEHLAYLRERAPDALRI
VDKMPHNFELIGLIGILFPNARIIHCRRDAIDNCISCFVLRFNEAHSYSADLQTLGLYYREYDRLMRHWNKVLPGRIFEN
RYEALIENQEQQSRRLIDYLGLPWDDACLRFFDREGSVNTYSRWQVRQPIYTSSIKRWRNYESEIQSLIESLGDLAET

Sequences:

>Translated_558_residues
MRNRLPPAWAKHLKTQPSVKVAMPKATLPKAQPNASPPRSQADDMLLRQALELQQAKRLPEAEELCLRVLARTPNHPLAY
YILGTLGIGYDNEKALRYFARAVAEEPQNPYYHLSLGETYLKVSEFTPAIRHIQQALDLKPDLVEALCALGDAYNEFDKG
ELALPLFEKALKIDRYHPLARLGLPYALASLGRMDEAAVLLKEAIDRRIALPTAYGALVQTRNFTEEPPELESILAELRD
PDLGSEDASALHHAAGKVLNDLGRYKEAMVHYKKGNQAGGHKFDLENYRRWIDAMIETFTPELFASRAAYGNPSDAPVFV
VGMPRSGTTLTEQICASHPNVHGAGELGKLRRVANGIGLANRSNTNFAESIATFTPDLTRALAGEHLAYLRERAPDALRI
VDKMPHNFELIGLIGILFPNARIIHCRRDAIDNCISCFVLRFNEAHSYSADLQTLGLYYREYDRLMRHWNKVLPGRIFEN
RYEALIENQEQQSRRLIDYLGLPWDDACLRFFDREGSVNTYSRWQVRQPIYTSSIKRWRNYESEIQSLIESLGDLAET
>Mature_558_residues
MRNRLPPAWAKHLKTQPSVKVAMPKATLPKAQPNASPPRSQADDMLLRQALELQQAKRLPEAEELCLRVLARTPNHPLAY
YILGTLGIGYDNEKALRYFARAVAEEPQNPYYHLSLGETYLKVSEFTPAIRHIQQALDLKPDLVEALCALGDAYNEFDKG
ELALPLFEKALKIDRYHPLARLGLPYALASLGRMDEAAVLLKEAIDRRIALPTAYGALVQTRNFTEEPPELESILAELRD
PDLGSEDASALHHAAGKVLNDLGRYKEAMVHYKKGNQAGGHKFDLENYRRWIDAMIETFTPELFASRAAYGNPSDAPVFV
VGMPRSGTTLTEQICASHPNVHGAGELGKLRRVANGIGLANRSNTNFAESIATFTPDLTRALAGEHLAYLRERAPDALRI
VDKMPHNFELIGLIGILFPNARIIHCRRDAIDNCISCFVLRFNEAHSYSADLQTLGLYYREYDRLMRHWNKVLPGRIFEN
RYEALIENQEQQSRRLIDYLGLPWDDACLRFFDREGSVNTYSRWQVRQPIYTSSIKRWRNYESEIQSLIESLGDLAET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863
- InterPro:   IPR001440
- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 63165; Mature: 63165

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRLPPAWAKHLKTQPSVKVAMPKATLPKAQPNASPPRSQADDMLLRQALELQQAKRLP
CCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
EAEELCLRVLARTPNHPLAYYILGTLGIGYDNEKALRYFARAVAEEPQNPYYHLSLGETY
CHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHH
LKVSEFTPAIRHIQQALDLKPDLVEALCALGDAYNEFDKGELALPLFEKALKIDRYHPLA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHH
RLGLPYALASLGRMDEAAVLLKEAIDRRIALPTAYGALVQTRNFTEEPPELESILAELRD
HHCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDLGSEDASALHHAAGKVLNDLGRYKEAMVHYKKGNQAGGHKFDLENYRRWIDAMIETFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
PELFASRAAYGNPSDAPVFVVGMPRSGTTLTEQICASHPNVHGAGELGKLRRVANGIGLA
HHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
NRSNTNFAESIATFTPDLTRALAGEHLAYLRERAPDALRIVDKMPHNFELIGLIGILFPN
CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHCCC
ARIIHCRRDAIDNCISCFVLRFNEAHSYSADLQTLGLYYREYDRLMRHWNKVLPGRIFEN
CEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RYEALIENQEQQSRRLIDYLGLPWDDACLRFFDREGSVNTYSRWQVRQPIYTSSIKRWRN
HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHH
YESEIQSLIESLGDLAET
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNRLPPAWAKHLKTQPSVKVAMPKATLPKAQPNASPPRSQADDMLLRQALELQQAKRLP
CCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
EAEELCLRVLARTPNHPLAYYILGTLGIGYDNEKALRYFARAVAEEPQNPYYHLSLGETY
CHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHH
LKVSEFTPAIRHIQQALDLKPDLVEALCALGDAYNEFDKGELALPLFEKALKIDRYHPLA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHH
RLGLPYALASLGRMDEAAVLLKEAIDRRIALPTAYGALVQTRNFTEEPPELESILAELRD
HHCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDLGSEDASALHHAAGKVLNDLGRYKEAMVHYKKGNQAGGHKFDLENYRRWIDAMIETFT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
PELFASRAAYGNPSDAPVFVVGMPRSGTTLTEQICASHPNVHGAGELGKLRRVANGIGLA
HHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
NRSNTNFAESIATFTPDLTRALAGEHLAYLRERAPDALRIVDKMPHNFELIGLIGILFPN
CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHCCC
ARIIHCRRDAIDNCISCFVLRFNEAHSYSADLQTLGLYYREYDRLMRHWNKVLPGRIFEN
CEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RYEALIENQEQQSRRLIDYLGLPWDDACLRFFDREGSVNTYSRWQVRQPIYTSSIKRWRN
HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHH
YESEIQSLIESLGDLAET
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]