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The map label for this gene is ybeB [H]

Identifier: 13473415

GI number: 13473415

Start: 3202352

End: 3202729

Strand: Reverse

Name: ybeB [H]

Synonym: mll4005

Alternate gene names: 13473415

Gene position: 3202729-3202352 (Counterclockwise)

Preceding gene: 13473417

Following gene: 13473414

Centisome position: 45.52

GC content: 61.9

Gene sequence:

>378_bases
GTGCCTTCGCCGGCCGGGATCAGCGTAAACGACGCCGTGTCCCGCGCCATCAACACAGTCCTTGCCAGTCTGGAAGACTC
CAAGGCCGAAAACATCGTCTCAATCGACATTCAGGGGAAATCGAGCCTCGGCGACTACATGGTCGTCGCGTCGGGCCGAT
CGCACCGTCATGTCTCGGCTGTCGCCGACCATCTTCTCAAGGCGCTCAAGGATGCCGGGCTCGGCACGGCGCGCGTCGAG
GGGCTGTCCGGCGCCGACTGGGTCCTGATCGATTCGGGCGACATCATCGTCCATGTCTTCCGCCCCGAAGTCCGCGAATT
CTACAATCTCGAAAAGATGTGGCAGGCGCCGGATCTCGAGGAAGAGACCCTCCACTAA

Upstream 100 bases:

>100_bases
GCCTATCTAAGTGGTGTCACCTGCTTTTGGGGGTGATTTGGTTGTTCTTGCTGCGAAAGGAAATACACTGAGAACAGCAC
TGCGGAAGAAGGCCGACATC

Downstream 100 bases:

>100_bases
GCCGCCTTTGTTTTGATGCATGTGATTATCCCAAAACCGCTTCCCACTTTTGGATGACATGCATTAGCGGCTCATAGAGG
CGAGGATGAAGATTTCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPSPAGISVNDAVSRAINTVLASLEDSKAENIVSIDIQGKSSLGDYMVVASGRSHRHVSAVADHLLKALKDAGLGTARVE
GLSGADWVLIDSGDIIVHVFRPEVREFYNLEKMWQAPDLEEETLH

Sequences:

>Translated_125_residues
MPSPAGISVNDAVSRAINTVLASLEDSKAENIVSIDIQGKSSLGDYMVVASGRSHRHVSAVADHLLKALKDAGLGTARVE
GLSGADWVLIDSGDIIVHVFRPEVREFYNLEKMWQAPDLEEETLH
>Mature_124_residues
PSPAGISVNDAVSRAINTVLASLEDSKAENIVSIDIQGKSSLGDYMVVASGRSHRHVSAVADHLLKALKDAGLGTARVEG
LSGADWVLIDSGDIIVHVFRPEVREFYNLEKMWQAPDLEEETLH

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=32.6732673267327, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI87081768, Length=97, Percent_Identity=44.3298969072165, Blast_Score=100, Evalue=3e-23,
Organism=Drosophila melanogaster, GI19923046, Length=73, Percent_Identity=41.0958904109589, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 13507; Mature: 13376

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPAGISVNDAVSRAINTVLASLEDSKAENIVSIDIQGKSSLGDYMVVASGRSHRHVSA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHH
VADHLLKALKDAGLGTARVEGLSGADWVLIDSGDIIVHVFRPEVREFYNLEKMWQAPDLE
HHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCEEEEEECHHHHHHHCHHHHHCCCCCC
EETLH
CCCCC
>Mature Secondary Structure 
PSPAGISVNDAVSRAINTVLASLEDSKAENIVSIDIQGKSSLGDYMVVASGRSHRHVSA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHH
VADHLLKALKDAGLGTARVEGLSGADWVLIDSGDIIVHVFRPEVREFYNLEKMWQAPDLE
HHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCEEEEEECHHHHHHHCHHHHHCCCCCC
EETLH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]