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The map label for this gene is ctpA [H]

Identifier: 13473412

GI number: 13473412

Start: 3198874

End: 3200205

Strand: Reverse

Name: ctpA [H]

Synonym: mll4000

Alternate gene names: 13473412

Gene position: 3200205-3198874 (Counterclockwise)

Preceding gene: 13473413

Following gene: 13473411

Centisome position: 45.48

GC content: 62.61

Gene sequence:

>1332_bases
ATGATGCGGAAACTGTCGCTTCTGTTTGCCGGTGCGCTGATGGGCGCATCCGCCATGAGCCTTGTCTATGGTGCTCCTGG
CTCGTCGGCGAACGCTGCGGGCTCGGAGACCTACAAGCAGCTGGCGATCTTCGGCGACATCTTCGAGCGGGTGCGGGCAC
AATATGTCACGCCGCCTGACGACAAGTCGCTGGTCGAGAACGCCATCAACGGCATGCTTTCCTCTCTCGACCCGCACTCC
TCCTACATGAATGCCGAACAGGCGCAGGACATGCGCGTTCAGACCAAGGGCGAGTTCGGCGGCCTCGGCATCGAGGTCAC
CATGGAGAACGACCTGGTTAAGGTGATCACGCCGATCGACGATACGCCCGCCGCCAAGGCTGGCGTGCTGGCCGGCGACT
ACATCGCCAAGATCGACGGCGAAGAGGTTCGCGGCCTGACGCTCAACGACGCGGTCGACAAGATGCGTGGCCTGGTCAAC
ACGCCGATCAAGCTCACCATCCTGCGCCAGGGTGCCGACAAGCCGATCGAGCTGACGGTGGTGCGCGACATCATCAAGGT
CAAGGCGGTCAAGTTCCGGGTCGAGAACGACATCGGCTACATGAAGATCACCTCCTTCACCGAAAAGACCTATGACGACC
TCGAGAACGCCATCGACACCATCAAGAAGCAGGTGCCGGACGACAAGCTCAAGGGCTATGTGCTCGACCTGCGCCTCAAT
CCGGGTGGTCTGCTCGACCAGGCGGTGAGCGTGTCCGACGCCTTCCTGAAGCGTGGCGAGATCGTCTCGACGCGTGGACG
CGATCCGAAGGACGTCACCCGTTTCGATGCCAAGCCGAAGCAGACCGACGACATCAACGGCAAGCCGATGATCGTGCTCG
TCAATGGCGGCTCGGCCAGCGCGTCCGAAATCGTCGCCGGCGCGCTGCAGGATCTGCGTCGCGTCACGGTGGTGGGCACG
CAGTCCTTCGGCAAGGGTTCGGTGCAGACCATCATTCCGCTCGGCGAGAATGGCGCGCTGCGGTTGACGACGGCGCTCTA
TTACACGCCGTCGGGTAAGTCGATCCAGGGCAAGGGCATCACGCCCGACATCAAGGTCGACCAGCCGCTGCCGCCGGAAC
TGCAGGGCAGGGACCTGACGCGCGGTGAATCCGATCTCAAGGGCCACATCAAGGGCGCCGACGAGAGCAAGACCGGCTCG
GGCTCGGCAGCCTATGTGCCGCCGGATCCGAAGGACGATCTGCAGCTCATCTTTGCTGAGCAACTGCTGCGTGGACAGAA
GACCGATCCCGCTTTCCCGCCCAATCCGGAAAAGGCCGTGCTCAACCAGTAA

Upstream 100 bases:

>100_bases
GGAAATGCCACGCCGGAACTCTACGTCGAGTTCCGCAAGGATGGAAAACCCGTCGATCCGGCCCCATGGTGGGCGGACCG
TTTTTCTGGAAGGACGTGAA

Downstream 100 bases:

>100_bases
GCCAGTCTGGCCGGCTGAACGAAGCAATGCGATGCTGCCGGGACCGAAAGGTTCCGGCAGTTTGATTCGGGGAGGCAAGA
CCAAGCCTCCGGATGCGGCG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MMRKLSLLFAGALMGASAMSLVYGAPGSSANAAGSETYKQLAIFGDIFERVRAQYVTPPDDKSLVENAINGMLSSLDPHS
SYMNAEQAQDMRVQTKGEFGGLGIEVTMENDLVKVITPIDDTPAAKAGVLAGDYIAKIDGEEVRGLTLNDAVDKMRGLVN
TPIKLTILRQGADKPIELTVVRDIIKVKAVKFRVENDIGYMKITSFTEKTYDDLENAIDTIKKQVPDDKLKGYVLDLRLN
PGGLLDQAVSVSDAFLKRGEIVSTRGRDPKDVTRFDAKPKQTDDINGKPMIVLVNGGSASASEIVAGALQDLRRVTVVGT
QSFGKGSVQTIIPLGENGALRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELQGRDLTRGESDLKGHIKGADESKTGS
GSAAYVPPDPKDDLQLIFAEQLLRGQKTDPAFPPNPEKAVLNQ

Sequences:

>Translated_443_residues
MMRKLSLLFAGALMGASAMSLVYGAPGSSANAAGSETYKQLAIFGDIFERVRAQYVTPPDDKSLVENAINGMLSSLDPHS
SYMNAEQAQDMRVQTKGEFGGLGIEVTMENDLVKVITPIDDTPAAKAGVLAGDYIAKIDGEEVRGLTLNDAVDKMRGLVN
TPIKLTILRQGADKPIELTVVRDIIKVKAVKFRVENDIGYMKITSFTEKTYDDLENAIDTIKKQVPDDKLKGYVLDLRLN
PGGLLDQAVSVSDAFLKRGEIVSTRGRDPKDVTRFDAKPKQTDDINGKPMIVLVNGGSASASEIVAGALQDLRRVTVVGT
QSFGKGSVQTIIPLGENGALRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELQGRDLTRGESDLKGHIKGADESKTGS
GSAAYVPPDPKDDLQLIFAEQLLRGQKTDPAFPPNPEKAVLNQ
>Mature_443_residues
MMRKLSLLFAGALMGASAMSLVYGAPGSSANAAGSETYKQLAIFGDIFERVRAQYVTPPDDKSLVENAINGMLSSLDPHS
SYMNAEQAQDMRVQTKGEFGGLGIEVTMENDLVKVITPIDDTPAAKAGVLAGDYIAKIDGEEVRGLTLNDAVDKMRGLVN
TPIKLTILRQGADKPIELTVVRDIIKVKAVKFRVENDIGYMKITSFTEKTYDDLENAIDTIKKQVPDDKLKGYVLDLRLN
PGGLLDQAVSVSDAFLKRGEIVSTRGRDPKDVTRFDAKPKQTDDINGKPMIVLVNGGSASASEIVAGALQDLRRVTVVGT
QSFGKGSVQTIIPLGENGALRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELQGRDLTRGESDLKGHIKGADESKTGS
GSAAYVPPDPKDDLQLIFAEQLLRGQKTDPAFPPNPEKAVLNQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=327, Percent_Identity=29.9694189602446, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47600; Mature: 47600

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKLSLLFAGALMGASAMSLVYGAPGSSANAAGSETYKQLAIFGDIFERVRAQYVTPPD
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DKSLVENAINGMLSSLDPHSSYMNAEQAQDMRVQTKGEFGGLGIEVTMENDLVKVITPID
HHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCEEEECCCCCCEEEEEEECCCEEEEEECCC
DTPAAKAGVLAGDYIAKIDGEEVRGLTLNDAVDKMRGLVNTPIKLTILRQGADKPIELTV
CCCCCCCCCEECCEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHH
VRDIIKVKAVKFRVENDIGYMKITSFTEKTYDDLENAIDTIKKQVPDDKLKGYVLDLRLN
HHHHHHHHHEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEEEEC
PGGLLDQAVSVSDAFLKRGEIVSTRGRDPKDVTRFDAKPKQTDDINGKPMIVLVNGGSAS
CCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
ASEIVAGALQDLRRVTVVGTQSFGKGSVQTIIPLGENGALRLTTALYYTPSGKSIQGKGI
HHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCC
TPDIKVDQPLPPELQGRDLTRGESDLKGHIKGADESKTGSGSAAYVPPDPKDDLQLIFAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHH
QLLRGQKTDPAFPPNPEKAVLNQ
HHHCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MMRKLSLLFAGALMGASAMSLVYGAPGSSANAAGSETYKQLAIFGDIFERVRAQYVTPPD
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DKSLVENAINGMLSSLDPHSSYMNAEQAQDMRVQTKGEFGGLGIEVTMENDLVKVITPID
HHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCEEEECCCCCCEEEEEEECCCEEEEEECCC
DTPAAKAGVLAGDYIAKIDGEEVRGLTLNDAVDKMRGLVNTPIKLTILRQGADKPIELTV
CCCCCCCCCEECCEEEECCCCCCCCEEHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHH
VRDIIKVKAVKFRVENDIGYMKITSFTEKTYDDLENAIDTIKKQVPDDKLKGYVLDLRLN
HHHHHHHHHEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEEEEC
PGGLLDQAVSVSDAFLKRGEIVSTRGRDPKDVTRFDAKPKQTDDINGKPMIVLVNGGSAS
CCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCC
ASEIVAGALQDLRRVTVVGTQSFGKGSVQTIIPLGENGALRLTTALYYTPSGKSIQGKGI
HHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCC
TPDIKVDQPLPPELQGRDLTRGESDLKGHIKGADESKTGSGSAAYVPPDPKDDLQLIFAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHH
QLLRGQKTDPAFPPNPEKAVLNQ
HHHCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]