| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is acrR [C]
Identifier: 13473366
GI number: 13473366
Start: 3157111
End: 3157740
Strand: Reverse
Name: acrR [C]
Synonym: mll3939
Alternate gene names: 13473366
Gene position: 3157740-3157111 (Counterclockwise)
Preceding gene: 13473369
Following gene: 13473363
Centisome position: 44.88
GC content: 68.57
Gene sequence:
>630_bases ATGGAAGGCACACCGGCCAACGAGCAGATCGCTTCGCCACGGCGGGCGCCGAGCCAGCAGCGCAGCCGGGAGCGGGTGGA GCGCATGCTTGCCGCGGCCTCGGCGCTGATCACCGAGCAAGGCAGCGACGCCATGCGCATGGGCGAGGTCGCGGAACGGG CAGGGGTGTCGATCGGTTCGCTCTACCAGTTCTTTCCCGACAAGCGGGCGATCATCTGGGCGCTGGCCGAGCGCTACACG GCCGAAAGCCAGGCCTGTATCTCGGCCGCGCTCAAGGATGTCAGCGACGCCGAAGGCCTGCGGCGGGCTTTCTCGGAGCT GGTTGATATCTACTACGGGCTGTTCCTGGCCGAGCCGGTGATGCGCGACATCTGGTCGGGCACGCAGGCCGACAAGGCGT TGCGCCAGCTCGAACTCGCCGACAGCCGGGCCAATGCGGAGTTCCTCGTGGCGGTGCTGAAGCGCCTGCGTCCCGGCGCC GACCCCGTCGCCCTGGAGACCACGGCATTTCTCGTCTGGCAAATGGGCGAGGCCGCGGTACGGCTGGCCATCTCGGTCGA GCGACAGGAGGGCGACAGGCTGGTCGCCGCCTACAAGCGCATGGCGCTGCGGGAACTGACCGGAGACTGA
Upstream 100 bases:
>100_bases ATGAGCAATCCTCACATTTGCAAAACGTGATAAACCCTCGTATTTTGTGAGTCAAGCCATTTTCTCGGCGATTGTGCCGA AGGGGTTGTTGGAGACAGTC
Downstream 100 bases:
>100_bases ACGGCGCCGCGCCTGCTCATTTTCCCTGCTCCGACAAGGATGTGGCCGGCAAGGATGTATTCGGTCGCCGCGACGGCCTC CTTCGTCGACAGCACGCTTC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; HTH-Type Transcriptional Regulator BetI; Transcriptional Regulator Protein; Regulatory Protein TetR
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MEGTPANEQIASPRRAPSQQRSRERVERMLAAASALITEQGSDAMRMGEVAERAGVSIGSLYQFFPDKRAIIWALAERYT AESQACISAALKDVSDAEGLRRAFSELVDIYYGLFLAEPVMRDIWSGTQADKALRQLELADSRANAEFLVAVLKRLRPGA DPVALETTAFLVWQMGEAAVRLAISVERQEGDRLVAAYKRMALRELTGD
Sequences:
>Translated_209_residues MEGTPANEQIASPRRAPSQQRSRERVERMLAAASALITEQGSDAMRMGEVAERAGVSIGSLYQFFPDKRAIIWALAERYT AESQACISAALKDVSDAEGLRRAFSELVDIYYGLFLAEPVMRDIWSGTQADKALRQLELADSRANAEFLVAVLKRLRPGA DPVALETTAFLVWQMGEAAVRLAISVERQEGDRLVAAYKRMALRELTGD >Mature_209_residues MEGTPANEQIASPRRAPSQQRSRERVERMLAAASALITEQGSDAMRMGEVAERAGVSIGSLYQFFPDKRAIIWALAERYT AESQACISAALKDVSDAEGLRRAFSELVDIYYGLFLAEPVMRDIWSGTQADKALRQLELADSRANAEFLVAVLKRLRPGA DPVALETTAFLVWQMGEAAVRLAISVERQEGDRLVAAYKRMALRELTGD
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23066; Mature: 23066
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGTPANEQIASPRRAPSQQRSRERVERMLAAASALITEQGSDAMRMGEVAERAGVSIGS CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH LYQFFPDKRAIIWALAERYTAESQACISAALKDVSDAEGLRRAFSELVDIYYGLFLAEPV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRDIWSGTQADKALRQLELADSRANAEFLVAVLKRLRPGADPVALETTAFLVWQMGEAAV HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RLAISVERQEGDRLVAAYKRMALRELTGD HHHHEEEHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEGTPANEQIASPRRAPSQQRSRERVERMLAAASALITEQGSDAMRMGEVAERAGVSIGS CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH LYQFFPDKRAIIWALAERYTAESQACISAALKDVSDAEGLRRAFSELVDIYYGLFLAEPV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRDIWSGTQADKALRQLELADSRANAEFLVAVLKRLRPGADPVALETTAFLVWQMGEAAV HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RLAISVERQEGDRLVAAYKRMALRELTGD HHHHEEEHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA