| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473361
Identifier: 13473361
GI number: 13473361
Start: 3150432
End: 3151916
Strand: Direct
Name: 13473361
Synonym: mlr3932
Alternate gene names: NA
Gene position: 3150432-3151916 (Clockwise)
Preceding gene: 13473359
Following gene: 13473362
Centisome position: 44.78
GC content: 66.26
Gene sequence:
>1485_bases ATGTCCTTTCAAAAACTCGACGACCTCGGCCACAAGCTCGAAGCGCTTGAGCATGCGCTGGCCATCCTCGGCGCCGACGA AGCGACGCATATGGCCGTCGGCGGCGGCGAGAAGCGCGCCGAGGCGATGGCGGCACTGGCCGGCATGTACCATGCCAGGG CGACCGCACCGGAAATCGCCGACTGGATCGCCGCCGCCGAAGGCGAGGCGCTCGACGACGAGCAGCGCGCGGCGCTCGGC GAACTGCGGCGGCAATACACCAACCTGACCTGCCTGCCGGTCGAATTCGTCGAACGCCAGACGACGGCGCGCATGCGTTG CGAGCAGCTGTGGCGCGACCTGCGCGCCAAGAACGACTGGGCGGGTTTCCAGCCGGCGCTCGAGGGCGTTGTGGCGCTGG TGCGCGAAGAGGCGGCTATGCGCTCAGACGTGCTCGGCCTCGCCCCTTACGATGCGCTGATGGAGCAATTCGACCCCGGC AACCGTACCGCCGACATCACCCCCGTCTTCGCCGACCTGAAAGCCTTCCTCAAGGGATTCGTGCCGGAGGCGCTGGCGAT CCAGGAAGCGCGGCTGCGCAAGCATCCGCTGAAGCCGCTCTCGGGCACCTACGCGATCGACAAGCAGCGCGAGCTTGGCC TTGCCATGATGGCGGCTGTCGGTTTCGACCTGACGCATGGCTCGCTGTCGGTGTCGCACCATCCCTTCTGCGGCGGCGTG CCCAGCGACGTGCGCATCACCACCCGTTACAAGACATCGGACTTCCTGTCGGCGCTGATGGGCGTGCTGCACGAGACCGG CCATGCGCTCTATGAACAGAACCTGCCGAAGGCGTGGTCGCACTGGCCGCTCGGCAAGGCGCGCGGCATGGCCGTGCATG AAAGCCAGAGCCTGTTCGTCGAAAAGCAGATCGGCCGCAATCCCGCCTTCTGGCGCTGGGCCCTGCCGGTGGTGGAAAAA CATCTCGGCGAAGCCTGGTCGCTCGACGACCTCCTGCCGCATGTGCATCGCGTCGAGCGCGGCCTGATCCGCGTCGACGC CGACGAGGTGACCTATCCCCTGCATGTCATCCTGCGCTACGAGCTGGAGCAGGAGCTGGTCTCGGGCAGGCTGGAGGTTG CCGATTTGCCCGAAGCCTGGGACGCCAAGATGCGCGACTATCTCGGTCTCTCCACGCTGGACAACCCGGCTGACGGGCCG ATGCAGGACGTGCACTGGCCAGGCGCCGCCTTCGGCTACTTCCCGTCCTACACGCTGGGCGCGATGATGGCGGCGCAGCA ATGGGCCGCGCTGACGCGCGAACATCCCACCGCCGATGACGACCTTGCCAAAGGAAACTTCGCGGCCATCAATGGATGGC GCCGCGAAAAAATCTGGTCGCAGGGTTCGCGCTGGTCGACGCCGAACCTGCTCGAACGCGCCACCGGCGAAAAGCTCAAC GCGGTGCATTTCGTCAATCACCTGAAGCAGCGCTACGGCGGATGA
Upstream 100 bases:
>100_bases GAGCGGTTTGCCGTTTCCATGAAACGGTGAACTGCCCTGAGGGTTGCCAAGGCTTTTGCGTTGGTGTCTTTTCGCGCCGT CCTCAATCACGGAAGCCGCC
Downstream 100 bases:
>100_bases GATCGGCCGCCCCGGTTTCGGCGACCGGCGGCGGCGAACAAGGAGGCGATGACGCGCCATCGCCGGGCGGCGATCTTGCG GGATCGCCGCTACTTTTCTA
Product: thermostable carboxypeptidase 1
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSFQKLDDLGHKLEALEHALAILGADEATHMAVGGGEKRAEAMAALAGMYHARATAPEIADWIAAAEGEALDDEQRAALG ELRRQYTNLTCLPVEFVERQTTARMRCEQLWRDLRAKNDWAGFQPALEGVVALVREEAAMRSDVLGLAPYDALMEQFDPG NRTADITPVFADLKAFLKGFVPEALAIQEARLRKHPLKPLSGTYAIDKQRELGLAMMAAVGFDLTHGSLSVSHHPFCGGV PSDVRITTRYKTSDFLSALMGVLHETGHALYEQNLPKAWSHWPLGKARGMAVHESQSLFVEKQIGRNPAFWRWALPVVEK HLGEAWSLDDLLPHVHRVERGLIRVDADEVTYPLHVILRYELEQELVSGRLEVADLPEAWDAKMRDYLGLSTLDNPADGP MQDVHWPGAAFGYFPSYTLGAMMAAQQWAALTREHPTADDDLAKGNFAAINGWRREKIWSQGSRWSTPNLLERATGEKLN AVHFVNHLKQRYGG
Sequences:
>Translated_494_residues MSFQKLDDLGHKLEALEHALAILGADEATHMAVGGGEKRAEAMAALAGMYHARATAPEIADWIAAAEGEALDDEQRAALG ELRRQYTNLTCLPVEFVERQTTARMRCEQLWRDLRAKNDWAGFQPALEGVVALVREEAAMRSDVLGLAPYDALMEQFDPG NRTADITPVFADLKAFLKGFVPEALAIQEARLRKHPLKPLSGTYAIDKQRELGLAMMAAVGFDLTHGSLSVSHHPFCGGV PSDVRITTRYKTSDFLSALMGVLHETGHALYEQNLPKAWSHWPLGKARGMAVHESQSLFVEKQIGRNPAFWRWALPVVEK HLGEAWSLDDLLPHVHRVERGLIRVDADEVTYPLHVILRYELEQELVSGRLEVADLPEAWDAKMRDYLGLSTLDNPADGP MQDVHWPGAAFGYFPSYTLGAMMAAQQWAALTREHPTADDDLAKGNFAAINGWRREKIWSQGSRWSTPNLLERATGEKLN AVHFVNHLKQRYGG >Mature_493_residues SFQKLDDLGHKLEALEHALAILGADEATHMAVGGGEKRAEAMAALAGMYHARATAPEIADWIAAAEGEALDDEQRAALGE LRRQYTNLTCLPVEFVERQTTARMRCEQLWRDLRAKNDWAGFQPALEGVVALVREEAAMRSDVLGLAPYDALMEQFDPGN RTADITPVFADLKAFLKGFVPEALAIQEARLRKHPLKPLSGTYAIDKQRELGLAMMAAVGFDLTHGSLSVSHHPFCGGVP SDVRITTRYKTSDFLSALMGVLHETGHALYEQNLPKAWSHWPLGKARGMAVHESQSLFVEKQIGRNPAFWRWALPVVEKH LGEAWSLDDLLPHVHRVERGLIRVDADEVTYPLHVILRYELEQELVSGRLEVADLPEAWDAKMRDYLGLSTLDNPADGPM QDVHWPGAAFGYFPSYTLGAMMAAQQWAALTREHPTADDDLAKGNFAAINGWRREKIWSQGSRWSTPNLLERATGEKLNA VHFVNHLKQRYGG
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 55004; Mature: 54873
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQKLDDLGHKLEALEHALAILGADEATHMAVGGGEKRAEAMAALAGMYHARATAPEIA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHH DWIAAAEGEALDDEQRAALGELRRQYTNLTCLPVEFVERQTTARMRCEQLWRDLRAKNDW HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGFQPALEGVVALVREEAAMRSDVLGLAPYDALMEQFDPGNRTADITPVFADLKAFLKGF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH VPEALAIQEARLRKHPLKPLSGTYAIDKQRELGLAMMAAVGFDLTHGSLSVSHHPFCGGV CCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC PSDVRITTRYKTSDFLSALMGVLHETGHALYEQNLPKAWSHWPLGKARGMAVHESQSLFV CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEECCHHHHH EKQIGRNPAFWRWALPVVEKHLGEAWSLDDLLPHVHRVERGLIRVDADEVTYPLHVILRY HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH ELEQELVSGRLEVADLPEAWDAKMRDYLGLSTLDNPADGPMQDVHWPGAAFGYFPSYTLG HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHH AMMAAQQWAALTREHPTADDDLAKGNFAAINGWRREKIWSQGSRWSTPNLLERATGEKLN HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCHHHHHHCCCHHH AVHFVNHLKQRYGG HHHHHHHHHHHHCC >Mature Secondary Structure SFQKLDDLGHKLEALEHALAILGADEATHMAVGGGEKRAEAMAALAGMYHARATAPEIA CHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHHHHHHHHCCCHHHH DWIAAAEGEALDDEQRAALGELRRQYTNLTCLPVEFVERQTTARMRCEQLWRDLRAKNDW HHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGFQPALEGVVALVREEAAMRSDVLGLAPYDALMEQFDPGNRTADITPVFADLKAFLKGF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH VPEALAIQEARLRKHPLKPLSGTYAIDKQRELGLAMMAAVGFDLTHGSLSVSHHPFCGGV CCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC PSDVRITTRYKTSDFLSALMGVLHETGHALYEQNLPKAWSHWPLGKARGMAVHESQSLFV CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEECCHHHHH EKQIGRNPAFWRWALPVVEKHLGEAWSLDDLLPHVHRVERGLIRVDADEVTYPLHVILRY HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH ELEQELVSGRLEVADLPEAWDAKMRDYLGLSTLDNPADGPMQDVHWPGAAFGYFPSYTLG HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHH AMMAAQQWAALTREHPTADDDLAKGNFAAINGWRREKIWSQGSRWSTPNLLERATGEKLN HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCHHHHHHCCCHHH AVHFVNHLKQRYGG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]