| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473324
Identifier: 13473324
GI number: 13473324
Start: 3118146
End: 3119012
Strand: Direct
Name: 13473324
Synonym: mlr3880
Alternate gene names: NA
Gene position: 3118146-3119012 (Clockwise)
Preceding gene: 13473318
Following gene: 13473325
Centisome position: 44.32
GC content: 65.86
Gene sequence:
>867_bases ATGCTCATCCACCGACTTGCCACTTTGACCGGCCTCGCCGTAGTGACGTTGTTTCTGGCCGCGCCAGCCAACGCACTGAC GATGGCCGAGTGCAGCACGAAGTATAACGCCGCCAAGGATGCGGGGACACTGGCCGGCCAGACCTGGAACCAGTTCCGCA AGGCACAATGCGGCACCGATGCCGCCGCCACCACGGACACCAAGCCGGCCACGACCAAGGCGGCCGAAACGAAGCCGGCC AAGGCCACCGAAACCAAGCCGGCCAAGGCCGCCGCCGCGGCGGCCGACAGCACCGCGAAAGGCCTGACGTCCAAGGAATG CAGCGCCAAATACCAGGCGGCGAAGGCCGCCGGCACGCTGAACGGCATGAAGTGGAACGACTTCCGCAAGACCGAATGCG CCGCCGGCGCATCCGCCGCCGCTGACACCACCAAGCCGGCAACCACCAAGCCGGCAACCACCAAGGCAGCCGCGGCCCCC GCCGGAGGCAAGGGTCTGACCATGGCCGAGTGCAGCGCCAAGTACCAGGCCGCGAAGACGGCGAACACGCTGAAAGGCCA GAAGTGGAACGACTTCCGCAAGGCCGAATGCGGTGCCGCCGCCGCCGATGACGACAGCGTGCCTGCTCCGAGCGAAGCAA ATTACACCAAGGAGCCGGCAAAGCCGACGACGGTTGCGCCCAAGGGCGTCACCTTCCCGTCCGCGATCTCGCCGAAATAT GCCAGCGAGACCCCCGGAAAGGGCCGCATGCACACCTGCCTCGACCAGTATTATGCCCTCAAGGACGCCAACGCGCTTGG CGGCCTTAAGTGGATCCAGAAGGGCGGCGGCTTCTACAGCCTGTGCAATGCCAAGCTGAAGGGCTAA
Upstream 100 bases:
>100_bases TTTGGGCGATATATACGCCACTTAGCATCTGGCGCAACCGACCGTTGAGCGTTATTGATTCGCTGGGACGTATAATGGGC TGCTGCAACGGAGAAACGCT
Downstream 100 bases:
>100_bases GCTACGCATTCCCCCGGATCGATGAGGCATGAGCCGGTTGAGATCGAATTGAGTTAGACGGAAAGTCTGACAAGGACAGG CAAAGGCCCGCGATGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLIHRLATLTGLAVVTLFLAAPANALTMAECSTKYNAAKDAGTLAGQTWNQFRKAQCGTDAAATTDTKPATTKAAETKPA KATETKPAKAAAAAADSTAKGLTSKECSAKYQAAKAAGTLNGMKWNDFRKTECAAGASAAADTTKPATTKPATTKAAAAP AGGKGLTMAECSAKYQAAKTANTLKGQKWNDFRKAECGAAAADDDSVPAPSEANYTKEPAKPTTVAPKGVTFPSAISPKY ASETPGKGRMHTCLDQYYALKDANALGGLKWIQKGGGFYSLCNAKLKG
Sequences:
>Translated_288_residues MLIHRLATLTGLAVVTLFLAAPANALTMAECSTKYNAAKDAGTLAGQTWNQFRKAQCGTDAAATTDTKPATTKAAETKPA KATETKPAKAAAAAADSTAKGLTSKECSAKYQAAKAAGTLNGMKWNDFRKTECAAGASAAADTTKPATTKPATTKAAAAP AGGKGLTMAECSAKYQAAKTANTLKGQKWNDFRKAECGAAAADDDSVPAPSEANYTKEPAKPTTVAPKGVTFPSAISPKY ASETPGKGRMHTCLDQYYALKDANALGGLKWIQKGGGFYSLCNAKLKG >Mature_288_residues MLIHRLATLTGLAVVTLFLAAPANALTMAECSTKYNAAKDAGTLAGQTWNQFRKAQCGTDAAATTDTKPATTKAAETKPA KATETKPAKAAAAAADSTAKGLTSKECSAKYQAAKAAGTLNGMKWNDFRKTECAAGASAAADTTKPATTKPATTKAAAAP AGGKGLTMAECSAKYQAAKTANTLKGQKWNDFRKAECGAAAADDDSVPAPSEANYTKEPAKPTTVAPKGVTFPSAISPKY ASETPGKGRMHTCLDQYYALKDANALGGLKWIQKGGGFYSLCNAKLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29543; Mature: 29543
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIHRLATLTGLAVVTLFLAAPANALTMAECSTKYNAAKDAGTLAGQTWNQFRKAQCGTD CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC AAATTDTKPATTKAAETKPAKATETKPAKAAAAAADSTAKGLTSKECSAKYQAAKAAGTL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCC NGMKWNDFRKTECAAGASAAADTTKPATTKPATTKAAAAPAGGKGLTMAECSAKYQAAKT CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH ANTLKGQKWNDFRKAECGAAAADDDSVPAPSEANYTKEPAKPTTVAPKGVTFPSAISPKY HHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASETPGKGRMHTCLDQYYALKDANALGGLKWIQKGGGFYSLCNAKLKG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MLIHRLATLTGLAVVTLFLAAPANALTMAECSTKYNAAKDAGTLAGQTWNQFRKAQCGTD CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC AAATTDTKPATTKAAETKPAKATETKPAKAAAAAADSTAKGLTSKECSAKYQAAKAAGTL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCC NGMKWNDFRKTECAAGASAAADTTKPATTKPATTKAAAAPAGGKGLTMAECSAKYQAAKT CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHH ANTLKGQKWNDFRKAECGAAAADDDSVPAPSEANYTKEPAKPTTVAPKGVTFPSAISPKY HHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASETPGKGRMHTCLDQYYALKDANALGGLKWIQKGGGFYSLCNAKLKG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA