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The map label for this gene is 13473322

Identifier: 13473322

GI number: 13473322

Start: 3115344

End: 3116177

Strand: Reverse

Name: 13473322

Synonym: mll3878

Alternate gene names: NA

Gene position: 3116177-3115344 (Counterclockwise)

Preceding gene: 13473323

Following gene: 13473321

Centisome position: 44.29

GC content: 61.51

Gene sequence:

>834_bases
ATGTTCAATACAGCAAGAAAGGCCCTGCTCGCGTTGCTGTTCGCGGGCCTGGCCTCGCCAGTGTTCGCGGCCGACCTGCC
TGAGCCGCAGGTCGAAGAGGCGCCGCCGCCGGTCTACGAACAGCCGGTCGACGTCGGCGGCTGGTATATCCGTGGCGACA
TCGACTATCACAAGTCCGATGTGCGCGGCATCGACTACATGACCTACGGCATCGATCCCTGTAATTGTACGGTCATACCG
GGCGGCAAGAGTTTCGACTACGGCAAGCTCAAGGGCGGCTTCTCGCTCGGCGGCGGTGTCGGGTACAAGATCAACGATCG
TCTGCGTGCGGACGTGACCGCCGACTACTGGTTCAAGTCGAACTTCAACGGCGGTACATCGGATCTCGTCTCGACGTCGA
CCGAAGTGTCGAAGATGAGCGCCCTGTTGCTGCTGGCCAATGCCTATGTCGATATCGGCACCTGGCACGGCATCACGCCT
TATGTCGGCGCCGGTATCGGCGGCGCACGCGTCAAGTGGGATACCGTCTACGACCCCAACACCGCCGAGACCAATCCCGG
AGCATCCAACTGGCGCTTTGCTTACGCTCTGATGGCCGGTGCTTCCTACTGCTTGACCGATAAGATCATCCTCGATGCGG
GCTATCGTTTCTCCCATATCCAGGGCGGCCGCATGTTCGAATGGGATGCGAGCAGCGCCGGCCCGGGTTTCGACCGGGGC
ATCAACACCCACGAGGTGCGCGGCGGCCTGCGCTATCAGTTCGGTGGCAACAATGGGTGCGCGGCACCGGTGGTGGCCTA
TCAGCCCGAACCTGAGCCGATCTACACCAAATAA

Upstream 100 bases:

>100_bases
GGGTTAAACGCCTTTTAACTTTTCCAATTCATTATCCACGCCTGAAAGCCAATCTCGTTCGGGCGCGATCGCGTGCCGAG
GGTTCCTAGGGGTGACAAGC

Downstream 100 bases:

>100_bases
GAACTTTACGGCCTCGAATATAAGCGAACCGCCCGGCTTGCCCGGGCGGTTTTCGTTTGCGCTGTCGCCAACGAAGTGTC
TGGAAGGAAGGTCAATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MFNTARKALLALLFAGLASPVFAADLPEPQVEEAPPPVYEQPVDVGGWYIRGDIDYHKSDVRGIDYMTYGIDPCNCTVIP
GGKSFDYGKLKGGFSLGGGVGYKINDRLRADVTADYWFKSNFNGGTSDLVSTSTEVSKMSALLLLANAYVDIGTWHGITP
YVGAGIGGARVKWDTVYDPNTAETNPGASNWRFAYALMAGASYCLTDKIILDAGYRFSHIQGGRMFEWDASSAGPGFDRG
INTHEVRGGLRYQFGGNNGCAAPVVAYQPEPEPIYTK

Sequences:

>Translated_277_residues
MFNTARKALLALLFAGLASPVFAADLPEPQVEEAPPPVYEQPVDVGGWYIRGDIDYHKSDVRGIDYMTYGIDPCNCTVIP
GGKSFDYGKLKGGFSLGGGVGYKINDRLRADVTADYWFKSNFNGGTSDLVSTSTEVSKMSALLLLANAYVDIGTWHGITP
YVGAGIGGARVKWDTVYDPNTAETNPGASNWRFAYALMAGASYCLTDKIILDAGYRFSHIQGGRMFEWDASSAGPGFDRG
INTHEVRGGLRYQFGGNNGCAAPVVAYQPEPEPIYTK
>Mature_277_residues
MFNTARKALLALLFAGLASPVFAADLPEPQVEEAPPPVYEQPVDVGGWYIRGDIDYHKSDVRGIDYMTYGIDPCNCTVIP
GGKSFDYGKLKGGFSLGGGVGYKINDRLRADVTADYWFKSNFNGGTSDLVSTSTEVSKMSALLLLANAYVDIGTWHGITP
YVGAGIGGARVKWDTVYDPNTAETNPGASNWRFAYALMAGASYCLTDKIILDAGYRFSHIQGGRMFEWDASSAGPGFDRG
INTHEVRGGLRYQFGGNNGCAAPVVAYQPEPEPIYTK

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 29917; Mature: 29917

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNTARKALLALLFAGLASPVFAADLPEPQVEEAPPPVYEQPVDVGGWYIRGDIDYHKSD
CCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCC
VRGIDYMTYGIDPCNCTVIPGGKSFDYGKLKGGFSLGGGVGYKINDRLRADVTADYWFKS
CCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCEECCCCCEEECCCEEECEEEEEEEEC
NFNGGTSDLVSTSTEVSKMSALLLLANAYVDIGTWHGITPYVGAGIGGARVKWDTVYDPN
CCCCCCHHHHHCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCEEEEEEEECCC
TAETNPGASNWRFAYALMAGASYCLTDKIILDAGYRFSHIQGGRMFEWDASSAGPGFDRG
CCCCCCCCCCCEEEEHHHHCCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCCCCHHCC
INTHEVRGGLRYQFGGNNGCAAPVVAYQPEPEPIYTK
CCHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MFNTARKALLALLFAGLASPVFAADLPEPQVEEAPPPVYEQPVDVGGWYIRGDIDYHKSD
CCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCCC
VRGIDYMTYGIDPCNCTVIPGGKSFDYGKLKGGFSLGGGVGYKINDRLRADVTADYWFKS
CCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCEECCCCCEEECCCEEECEEEEEEEEC
NFNGGTSDLVSTSTEVSKMSALLLLANAYVDIGTWHGITPYVGAGIGGARVKWDTVYDPN
CCCCCCHHHHHCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCEEEEEEEECCC
TAETNPGASNWRFAYALMAGASYCLTDKIILDAGYRFSHIQGGRMFEWDASSAGPGFDRG
CCCCCCCCCCCEEEEHHHHCCCCCEEEEEEEECCCEEEEECCCEEEEECCCCCCCCHHCC
INTHEVRGGLRYQFGGNNGCAAPVVAYQPEPEPIYTK
CCHHHHCCCEEEEECCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA