Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473316

Identifier: 13473316

GI number: 13473316

Start: 3107005

End: 3108732

Strand: Reverse

Name: 13473316

Synonym: mll3872

Alternate gene names: NA

Gene position: 3108732-3107005 (Counterclockwise)

Preceding gene: 13473317

Following gene: 13473312

Centisome position: 44.18

GC content: 69.44

Gene sequence:

>1728_bases
ATGGCAGATTTTGTTGCTGTTCTGAAAAAGGCGCTCGACAAATATGGCGAGCCGACGCCTGAAACGCGCACGCGGACCTA
TGACGGCGCTCGTTCGGCGCTGGTCAAGAAGCTCGCGGAGTTTTCGCCGCCATTGTCGGCCGACGTCGTGGCCAAGCAGA
AGCGCTCGCTGGAAGACGCCATTGCGAGCGTAGAGCACGAGTATACCAAGAGCGTGCCGGAAGCGGATCCGCTCGCCGAG
CTGGAACATATCTTTTCCTCGATCGATCGCAACAAGAACCAGCCAAGCCACACGCGCCAGCCGGTGAAGGCTGAGCCGGC
GTGGCCGGCACCGCCAGCCGCCAAGGCCGAGCCCTACCGGCCCGCGCCGCCGCCTGCCGCCACGCCGGAACCTTACCAGT
CCGTGCCTTCGCCTGCGGCCAAGGCCGAGCCAAGCTGGCAGAAACCCACGCCGGTGCAACCGGTGGCCCCCGATCTCGCC
GATCCTGCCTTGCCGGGCATGGATACGGACCAGGACGATGACCGCGCCGACGTCTTCCCGAACGATGAGGAGCCGGCGGC
CGCCGATACTTTCCGCCTGCGTCCGGCCGAGCGCAGGCGCAGCTATGGCGGGCTGATCGCCGCCGTCGTCGCCTTGTTGG
TCGTTGCCGGCGGTGGCTATGGCATCTGGCTGAACAAGGACGCCTTCGGCAAGATGCTGGGCCTGGACGGCAGCAAGGTC
GTCGCCAAGACCGAACCGGTGAAACCGGCGCCGGCCAAGCCGGCGACCGACGCCCCGGCGACACCAGCGCCCGCGGCAGG
TACCGAGGCGACGAAATTCACACAGCGGCTGACGCCCGAAGGCGGCGAAACCGACCCCGGCCCGGCCGGTGGCCAAACCG
GCGTAGGCGAGGGTGAATCCGTCGCCGCGCTGACGACGCCGCCATCGGCGACGAATGCGCCGGCCAATCCGCCCCCGGCT
GCAGCCGCGCCCGCGGCAGTGCCCGCCGCGGCGGCGCCTGCCGCGACCGCACCCGCGGCGGGCGCCGCGCCCGCCGCACC
CCCGCCTGCCAACGGAACTACACCCGCGGCGCCGGCCAATGCCGCCGCTACGCCCGCCCCAGCGGGCGCCACGCCTGCCC
CAGCGGGTGCCACGCCCGCGGCACCGGCTGCCCCCGTGGCGGCGGCCTCGGTGCCGGTCGGCCAGAAGGCGATCTTCTAT
GAGGAGCGCACCAGCACCGCGCAGGGTTCAGCCGAGCCCGGCAGCATCGTCTGGTCGCTGGTGCAGGAATCGCCCGGTGG
CGACCTGCCGCCCGAGCCGGCGATCCGCGCCGAGGCGACCATCCCCGGCAAGGACATCCAGTTGCGCATGACCATCCGCC
GCAACACCGACCAGACGCTGCCGGCCAGCCACATCATCGAGATGATCTTCCTGACGCCCGACGGTTTTGAGGGTGGCGGT
GTCGACAACATATTGCGCGTCGCGATGAAGAGTTCCGAGCAGGATGCCGGCAGCCCGCTGATCGGCATCCCGGCAAAGAT
CGCCGACGGCTTCTTCCTCGTCGCACTCAACGACACCAAGGCCGACGAGGACGCCAACATGACCTTGCTGCGCGGCCAGG
ACTGGATCGACGTGCCGGTCGTCTACAAGACCGGCCGGCGGGCGCTGCTGACCATGGAAAAAGGCATTCCCGGCGAGAAG
GTGTTCGACGAGGCGATCAAGGCCTGGCAGGCGAAGACGGCGGGCTGA

Upstream 100 bases:

>100_bases
GTGACCGATCCGTTTCAAGACTAGTTTCTGAAGCCTTTCCGGGCATCACGGCTGATTTGCGGGGGCCGGCGCGGAAGCAA
AAATACAGGTCGACTGAAGC

Downstream 100 bases:

>100_bases
GAAGGCGGCGCGGATTTGGATAGGGTTGTGGTCTCAAAACGGCCGATACTTGGCTAAGGGCAGTCCGTTTCGGCTGACAT
AGCCGTTCGAGCTGGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDAIASVEHEYTKSVPEADPLAE
LEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYRPAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLA
DPALPGMDTDQDDDRADVFPNDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV
VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGESVAALTTPPSATNAPANPPPA
AAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPANAAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFY
EERTSTAQGSAEPGSIVWSLVQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG
VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPVVYKTGRRALLTMEKGIPGEK
VFDEAIKAWQAKTAG

Sequences:

>Translated_575_residues
MADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDAIASVEHEYTKSVPEADPLAE
LEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYRPAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLA
DPALPGMDTDQDDDRADVFPNDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV
VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGESVAALTTPPSATNAPANPPPA
AAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPANAAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFY
EERTSTAQGSAEPGSIVWSLVQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG
VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPVVYKTGRRALLTMEKGIPGEK
VFDEAIKAWQAKTAG
>Mature_574_residues
ADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDAIASVEHEYTKSVPEADPLAEL
EHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYRPAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLAD
PALPGMDTDQDDDRADVFPNDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKVV
AKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGESVAALTTPPSATNAPANPPPAA
AAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPANAAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFYE
ERTSTAQGSAEPGSIVWSLVQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGGV
DNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPVVYKTGRRALLTMEKGIPGEKV
FDEAIKAWQAKTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59030; Mature: 58898

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDA
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IASVEHEYTKSVPEADPLAELEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLADPALPGMDTDQDDDRADVFP
CCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV
CCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCEE
VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGES
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VAALTTPPSATNAPANPPPAAAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPAN
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFYEERTSTAQGSAEPGSIVWSL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
VQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG
HHCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCC
VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPV
HHHHHHHHHHCCCHHCCCCEEECCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCE
VYKTGRRALLTMEKGIPGEKVFDEAIKAWQAKTAG
EEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDA
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IASVEHEYTKSVPEADPLAELEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLADPALPGMDTDQDDDRADVFP
CCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV
CCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCEE
VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGES
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VAALTTPPSATNAPANPPPAAAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPAN
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFYEERTSTAQGSAEPGSIVWSL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH
VQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG
HHCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCC
VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPV
HHHHHHHHHHCCCHHCCCCEEECCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCE
VYKTGRRALLTMEKGIPGEKVFDEAIKAWQAKTAG
EEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA