| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473316
Identifier: 13473316
GI number: 13473316
Start: 3107005
End: 3108732
Strand: Reverse
Name: 13473316
Synonym: mll3872
Alternate gene names: NA
Gene position: 3108732-3107005 (Counterclockwise)
Preceding gene: 13473317
Following gene: 13473312
Centisome position: 44.18
GC content: 69.44
Gene sequence:
>1728_bases ATGGCAGATTTTGTTGCTGTTCTGAAAAAGGCGCTCGACAAATATGGCGAGCCGACGCCTGAAACGCGCACGCGGACCTA TGACGGCGCTCGTTCGGCGCTGGTCAAGAAGCTCGCGGAGTTTTCGCCGCCATTGTCGGCCGACGTCGTGGCCAAGCAGA AGCGCTCGCTGGAAGACGCCATTGCGAGCGTAGAGCACGAGTATACCAAGAGCGTGCCGGAAGCGGATCCGCTCGCCGAG CTGGAACATATCTTTTCCTCGATCGATCGCAACAAGAACCAGCCAAGCCACACGCGCCAGCCGGTGAAGGCTGAGCCGGC GTGGCCGGCACCGCCAGCCGCCAAGGCCGAGCCCTACCGGCCCGCGCCGCCGCCTGCCGCCACGCCGGAACCTTACCAGT CCGTGCCTTCGCCTGCGGCCAAGGCCGAGCCAAGCTGGCAGAAACCCACGCCGGTGCAACCGGTGGCCCCCGATCTCGCC GATCCTGCCTTGCCGGGCATGGATACGGACCAGGACGATGACCGCGCCGACGTCTTCCCGAACGATGAGGAGCCGGCGGC CGCCGATACTTTCCGCCTGCGTCCGGCCGAGCGCAGGCGCAGCTATGGCGGGCTGATCGCCGCCGTCGTCGCCTTGTTGG TCGTTGCCGGCGGTGGCTATGGCATCTGGCTGAACAAGGACGCCTTCGGCAAGATGCTGGGCCTGGACGGCAGCAAGGTC GTCGCCAAGACCGAACCGGTGAAACCGGCGCCGGCCAAGCCGGCGACCGACGCCCCGGCGACACCAGCGCCCGCGGCAGG TACCGAGGCGACGAAATTCACACAGCGGCTGACGCCCGAAGGCGGCGAAACCGACCCCGGCCCGGCCGGTGGCCAAACCG GCGTAGGCGAGGGTGAATCCGTCGCCGCGCTGACGACGCCGCCATCGGCGACGAATGCGCCGGCCAATCCGCCCCCGGCT GCAGCCGCGCCCGCGGCAGTGCCCGCCGCGGCGGCGCCTGCCGCGACCGCACCCGCGGCGGGCGCCGCGCCCGCCGCACC CCCGCCTGCCAACGGAACTACACCCGCGGCGCCGGCCAATGCCGCCGCTACGCCCGCCCCAGCGGGCGCCACGCCTGCCC CAGCGGGTGCCACGCCCGCGGCACCGGCTGCCCCCGTGGCGGCGGCCTCGGTGCCGGTCGGCCAGAAGGCGATCTTCTAT GAGGAGCGCACCAGCACCGCGCAGGGTTCAGCCGAGCCCGGCAGCATCGTCTGGTCGCTGGTGCAGGAATCGCCCGGTGG CGACCTGCCGCCCGAGCCGGCGATCCGCGCCGAGGCGACCATCCCCGGCAAGGACATCCAGTTGCGCATGACCATCCGCC GCAACACCGACCAGACGCTGCCGGCCAGCCACATCATCGAGATGATCTTCCTGACGCCCGACGGTTTTGAGGGTGGCGGT GTCGACAACATATTGCGCGTCGCGATGAAGAGTTCCGAGCAGGATGCCGGCAGCCCGCTGATCGGCATCCCGGCAAAGAT CGCCGACGGCTTCTTCCTCGTCGCACTCAACGACACCAAGGCCGACGAGGACGCCAACATGACCTTGCTGCGCGGCCAGG ACTGGATCGACGTGCCGGTCGTCTACAAGACCGGCCGGCGGGCGCTGCTGACCATGGAAAAAGGCATTCCCGGCGAGAAG GTGTTCGACGAGGCGATCAAGGCCTGGCAGGCGAAGACGGCGGGCTGA
Upstream 100 bases:
>100_bases GTGACCGATCCGTTTCAAGACTAGTTTCTGAAGCCTTTCCGGGCATCACGGCTGATTTGCGGGGGCCGGCGCGGAAGCAA AAATACAGGTCGACTGAAGC
Downstream 100 bases:
>100_bases GAAGGCGGCGCGGATTTGGATAGGGTTGTGGTCTCAAAACGGCCGATACTTGGCTAAGGGCAGTCCGTTTCGGCTGACAT AGCCGTTCGAGCTGGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDAIASVEHEYTKSVPEADPLAE LEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYRPAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLA DPALPGMDTDQDDDRADVFPNDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGESVAALTTPPSATNAPANPPPA AAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPANAAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFY EERTSTAQGSAEPGSIVWSLVQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPVVYKTGRRALLTMEKGIPGEK VFDEAIKAWQAKTAG
Sequences:
>Translated_575_residues MADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDAIASVEHEYTKSVPEADPLAE LEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYRPAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLA DPALPGMDTDQDDDRADVFPNDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGESVAALTTPPSATNAPANPPPA AAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPANAAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFY EERTSTAQGSAEPGSIVWSLVQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPVVYKTGRRALLTMEKGIPGEK VFDEAIKAWQAKTAG >Mature_574_residues ADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDAIASVEHEYTKSVPEADPLAEL EHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYRPAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLAD PALPGMDTDQDDDRADVFPNDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKVV AKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGESVAALTTPPSATNAPANPPPAA AAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPANAAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFYE ERTSTAQGSAEPGSIVWSLVQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGGV DNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPVVYKTGRRALLTMEKGIPGEKV FDEAIKAWQAKTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59030; Mature: 58898
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDA CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IASVEHEYTKSVPEADPLAELEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC PAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLADPALPGMDTDQDDDRADVFP CCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV CCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCEE VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGES EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC VAALTTPPSATNAPANPPPAAAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPAN EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFYEERTSTAQGSAEPGSIVWSL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH VQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG HHCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCC VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPV HHHHHHHHHHCCCHHCCCCEEECCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCE VYKTGRRALLTMEKGIPGEKVFDEAIKAWQAKTAG EEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADFVAVLKKALDKYGEPTPETRTRTYDGARSALVKKLAEFSPPLSADVVAKQKRSLEDA HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH IASVEHEYTKSVPEADPLAELEHIFSSIDRNKNQPSHTRQPVKAEPAWPAPPAAKAEPYR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC PAPPPAATPEPYQSVPSPAAKAEPSWQKPTPVQPVAPDLADPALPGMDTDQDDDRADVFP CCCCCCCCCCHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDEEPAAADTFRLRPAERRRSYGGLIAAVVALLVVAGGGYGIWLNKDAFGKMLGLDGSKV CCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCEE VAKTEPVKPAPAKPATDAPATPAPAAGTEATKFTQRLTPEGGETDPGPAGGQTGVGEGES EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC VAALTTPPSATNAPANPPPAAAAPAAVPAAAAPAATAPAAGAAPAAPPPANGTTPAAPAN EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAATPAPAGATPAPAGATPAAPAAPVAAASVPVGQKAIFYEERTSTAQGSAEPGSIVWSL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH VQESPGGDLPPEPAIRAEATIPGKDIQLRMTIRRNTDQTLPASHIIEMIFLTPDGFEGGG HHCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCC VDNILRVAMKSSEQDAGSPLIGIPAKIADGFFLVALNDTKADEDANMTLLRGQDWIDVPV HHHHHHHHHHCCCHHCCCCEEECCHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCE VYKTGRRALLTMEKGIPGEKVFDEAIKAWQAKTAG EEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA