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The map label for this gene is ftrA [H]

Identifier: 13473293

GI number: 13473293

Start: 3082527

End: 3083525

Strand: Reverse

Name: ftrA [H]

Synonym: mll3844

Alternate gene names: 13473293

Gene position: 3083525-3082527 (Counterclockwise)

Preceding gene: 13473295

Following gene: 13473291

Centisome position: 43.82

GC content: 67.57

Gene sequence:

>999_bases
ATGCCAAATGCGCCCCCTGCCGATCGGCCCCCTTCCAATAGGCTTGTCGTTGCCATTGCCTATGACGGGCTGTGCACGTT
CGAGTTCGGCGTGGCGGCCGAGATGTTCGCCTTGCCCAGGCCGGAAATGGGTTCGGATTGGTACCGTTTTGCCGTCGCCG
GCATCGATGCCGGCGAAATGCGTGCGATGGGCGGCGTGCGCATCGTCGCCGATGGCGGACCCGATCTGATCGGCGAGGCC
GGTACGGTGATCGTGCCGGGATGGCGCGGTGTGGACTGTCCGGTGCCGCCATTGCTGATCGAGGCGCTTCGGGCGGCCAG
TGAGCGGGGCGCACGCATCCTGTCCATCTGCTCCGGCGTCTTCGTGCTGGCCGCGGCTGGCCTGCTGTCAGGCAAGAAGG
CAACCACGCATTGGCGCTACAGCGACAGGCTGAGGGAGATGTATCCCGACATCACCGTGGTTCCGGATGTCCTGTACATC
GACGAGGGGAATGTGCTGACATCGGCCGGCAGCGCGGCGGGCATCGACCTGTGCCTGCATCTGGTGCGGCGCGACTTCGG
CACCAAGGCGGCCAATATGGTGGCGCGCCGCCTGGTCGTGCCGCCACACCGCGACGGCGGCCAGGCACAGTATGTCGAGA
GTTCCGTTCCCGAGCCACACGAACGCGGCCGGCTTGGACCGTTGATCGACAGAATGCGTGCCGACATTGCCGCCGACTAT
CCCGTCGCCACCCTGGCCGACCTGGCGGGGATGAGCGAGCGGACATTTTTGCGCCGGTTCGCGGCCGCGACCGGTGTCAC
GCCGGCGCGCTGGCTGCTCTCGGAGCGGCTTTCGAGGGCGCGCACGCTGCTGGAAGACACCGCCTTGCCGATCGAGCGGA
TTGCCGAGACCGCCGGCTTTGGCGCGGCGGCGACGTTGCGGCATCATTTCCGCCGGCAATTCGCCACGACGCCCGCCGCG
TACCGGGCGCGGTTCGGGACCAATGCCAACTCCGCCTGA

Upstream 100 bases:

>100_bases
TCCATCGCTGATGGAGCTGGTCTCCATCGCTGATGAAGTTGAGGTAGCGCACCGGACGGGGCGATTGCAGCTGGCAGCTT
TGCCATATATCGTCAAGATC

Downstream 100 bases:

>100_bases
CGACTTCGCACGCCGTCAGGGCAACAGCCCTTCATAGCGGCCGCGCGGCCGGATGATGCTGCCGCTGACGATCTGCTCGA
CCATATGGGCGGCCCAGCCA

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MPNAPPADRPPSNRLVVAIAYDGLCTFEFGVAAEMFALPRPEMGSDWYRFAVAGIDAGEMRAMGGVRIVADGGPDLIGEA
GTVIVPGWRGVDCPVPPLLIEALRAASERGARILSICSGVFVLAAAGLLSGKKATTHWRYSDRLREMYPDITVVPDVLYI
DEGNVLTSAGSAAGIDLCLHLVRRDFGTKAANMVARRLVVPPHRDGGQAQYVESSVPEPHERGRLGPLIDRMRADIAADY
PVATLADLAGMSERTFLRRFAAATGVTPARWLLSERLSRARTLLEDTALPIERIAETAGFGAAATLRHHFRRQFATTPAA
YRARFGTNANSA

Sequences:

>Translated_332_residues
MPNAPPADRPPSNRLVVAIAYDGLCTFEFGVAAEMFALPRPEMGSDWYRFAVAGIDAGEMRAMGGVRIVADGGPDLIGEA
GTVIVPGWRGVDCPVPPLLIEALRAASERGARILSICSGVFVLAAAGLLSGKKATTHWRYSDRLREMYPDITVVPDVLYI
DEGNVLTSAGSAAGIDLCLHLVRRDFGTKAANMVARRLVVPPHRDGGQAQYVESSVPEPHERGRLGPLIDRMRADIAADY
PVATLADLAGMSERTFLRRFAAATGVTPARWLLSERLSRARTLLEDTALPIERIAETAGFGAAATLRHHFRRQFATTPAA
YRARFGTNANSA
>Mature_331_residues
PNAPPADRPPSNRLVVAIAYDGLCTFEFGVAAEMFALPRPEMGSDWYRFAVAGIDAGEMRAMGGVRIVADGGPDLIGEAG
TVIVPGWRGVDCPVPPLLIEALRAASERGARILSICSGVFVLAAAGLLSGKKATTHWRYSDRLREMYPDITVVPDVLYID
EGNVLTSAGSAAGIDLCLHLVRRDFGTKAANMVARRLVVPPHRDGGQAQYVESSVPEPHERGRLGPLIDRMRADIAADYP
VATLADLAGMSERTFLRRFAAATGVTPARWLLSERLSRARTLLEDTALPIERIAETAGFGAAATLRHHFRRQFATTPAAY
RARFGTNANSA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35720; Mature: 35589

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNAPPADRPPSNRLVVAIAYDGLCTFEFGVAAEMFALPRPEMGSDWYRFAVAGIDAGEM
CCCCCCCCCCCCCCEEEEEEECCEEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHH
RAMGGVRIVADGGPDLIGEAGTVIVPGWRGVDCPVPPLLIEALRAASERGARILSICSGV
HHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
FVLAAAGLLSGKKATTHWRYSDRLREMYPDITVVPDVLYIDEGNVLTSAGSAAGIDLCLH
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCCEEEECCCCEEECCCCHHHHHHHHH
LVRRDFGTKAANMVARRLVVPPHRDGGQAQYVESSVPEPHERGRLGPLIDRMRADIAADY
HHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCC
PVATLADLAGMSERTFLRRFAAATGVTPARWLLSERLSRARTLLEDTALPIERIAETAGF
CHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
GAAATLRHHFRRQFATTPAAYRARFGTNANSA
CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNAPPADRPPSNRLVVAIAYDGLCTFEFGVAAEMFALPRPEMGSDWYRFAVAGIDAGEM
CCCCCCCCCCCCCEEEEEEECCEEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHH
RAMGGVRIVADGGPDLIGEAGTVIVPGWRGVDCPVPPLLIEALRAASERGARILSICSGV
HHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
FVLAAAGLLSGKKATTHWRYSDRLREMYPDITVVPDVLYIDEGNVLTSAGSAAGIDLCLH
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCCEEEECCCCEEECCCCHHHHHHHHH
LVRRDFGTKAANMVARRLVVPPHRDGGQAQYVESSVPEPHERGRLGPLIDRMRADIAADY
HHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHCCCCCHHHHHHHHHHCCCC
PVATLADLAGMSERTFLRRFAAATGVTPARWLLSERLSRARTLLEDTALPIERIAETAGF
CHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
GAAATLRHHFRRQFATTPAAYRARFGTNANSA
CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]