Click here to switch to the map view.

The map label for this gene is bepF [H]

Identifier: 13473285

GI number: 13473285

Start: 3073334

End: 3074446

Strand: Reverse

Name: bepF [H]

Synonym: mll3833

Alternate gene names: 13473285

Gene position: 3074446-3073334 (Counterclockwise)

Preceding gene: 13473286

Following gene: 13473284

Centisome position: 43.7

GC content: 67.39

Gene sequence:

>1113_bases
ATGGCGACAGGCGAGTTCTCGTCGGTCGGCAGCGTAGCGGCCAACAAGGCCAAGGCGGCCGAAGTCGAGCCGGGCAAGGC
GGCGGACGCGAGCAAGCCGAAGACGGCGGAAGCCGAACCGAAGGCGCCACTGCGCACCGTTGCCGTGGTGACGCCGCCGC
GCAGGACCTATGCGCGCGCCATCCGCATTTCCGGCCTGACCGAGGCAGACAAGCGCGCGGTTCTGGCAACCCGCGTCGCC
GGCGTCATCGACAAGCTGCCGGTCAAGCAAGGCGATCACGTCAAGACCGGCGACCTGGTGCTGATGCTGGCGGCGGAAGA
AAAGATCTCGATGGTCGACAATGCCAAGCAGCTTGTCGCGCAACGCCAGGCCGAGCTGGACGCGTCGCTGCGGCTGATGA
AGACGGGCAATTTGCCCAAGCTGCAGCTCGACACCGCCCGCTCCAATCTGACCCTGGCGCAATCGCAGCTGGATACCGCA
CAGGCCGAACTCGACCGCAACGAGGTCAAGGCGCCGTTTGACGGCGTCATCGACCGGGTACCGGTGGAACTCGGCAGCTC
CGTCATGCAGGGCGGCGAGGTGGCCACCATCCTCAAGCTCGATCCGGTGATCGCCCGCGGCGAGATCAGCGAGCGCGACC
TCGGCTATCTCAAGATCGGCGACAAGGCCGGCGTCCGGCTGGTCAGCGGCCAGACCGTCGAAGGCACCGTGCGCTATATC
AGCCGCGACGCGTCGTCGGCGACCCGCACCTTCCGCGTCGAGGTCGCCATCCCCAATGCCGACGGCTCGGTGCCGGCCGG
CATGACGGCGGAAATCCAGCTCAGCGCGCTGCCGACCGACGCGGTCCTGCTGCCGCGCTCGGTGGTGACACTGGGCGACA
AGGGCGATCTGGGCATCCGCGCCGTCGGCAAGGACAACAGAGTGGCGTTCTTCCCCATCGACCTGGTCGACGACACCCCG
ACCGGCCTCGTGCTTGGCGGCATCCCGGACGATGCGCGCATCATCGTTGCCGGTCAGGAACTGGTGAAGGAAGGCGATGA
GGTCAAGCCGGTCGAGGCCGACCAAGCGACCATCAACAAGCTGATCGGCGAAGCCACCGCCGGGACGCAGTAG

Upstream 100 bases:

>100_bases
CGCGGAGCTGACCGAACCCGCAACGGAAAAAACGACGATGCCTAAAATCAGGTTTCACAAGCTTGCAGCCATTGTTGTGC
TCATTGGTTTCGCGGCGTGG

Downstream 100 bases:

>100_bases
CGCAGCGAGGCCGGCGCCGGGCCCTGCCCGGCGACGTCAGTCCGTTCGCCACTCCCGAAAGCAACAGGCATAAGTCATGG
ATATCGTCAGACTCGCAATC

Product: periplasmic linker protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MATGEFSSVGSVAANKAKAAEVEPGKAADASKPKTAEAEPKAPLRTVAVVTPPRRTYARAIRISGLTEADKRAVLATRVA
GVIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVAQRQAELDASLRLMKTGNLPKLQLDTARSNLTLAQSQLDTA
QAELDRNEVKAPFDGVIDRVPVELGSSVMQGGEVATILKLDPVIARGEISERDLGYLKIGDKAGVRLVSGQTVEGTVRYI
SRDASSATRTFRVEVAIPNADGSVPAGMTAEIQLSALPTDAVLLPRSVVTLGDKGDLGIRAVGKDNRVAFFPIDLVDDTP
TGLVLGGIPDDARIIVAGQELVKEGDEVKPVEADQATINKLIGEATAGTQ

Sequences:

>Translated_370_residues
MATGEFSSVGSVAANKAKAAEVEPGKAADASKPKTAEAEPKAPLRTVAVVTPPRRTYARAIRISGLTEADKRAVLATRVA
GVIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVAQRQAELDASLRLMKTGNLPKLQLDTARSNLTLAQSQLDTA
QAELDRNEVKAPFDGVIDRVPVELGSSVMQGGEVATILKLDPVIARGEISERDLGYLKIGDKAGVRLVSGQTVEGTVRYI
SRDASSATRTFRVEVAIPNADGSVPAGMTAEIQLSALPTDAVLLPRSVVTLGDKGDLGIRAVGKDNRVAFFPIDLVDDTP
TGLVLGGIPDDARIIVAGQELVKEGDEVKPVEADQATINKLIGEATAGTQ
>Mature_369_residues
ATGEFSSVGSVAANKAKAAEVEPGKAADASKPKTAEAEPKAPLRTVAVVTPPRRTYARAIRISGLTEADKRAVLATRVAG
VIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVAQRQAELDASLRLMKTGNLPKLQLDTARSNLTLAQSQLDTAQ
AELDRNEVKAPFDGVIDRVPVELGSSVMQGGEVATILKLDPVIARGEISERDLGYLKIGDKAGVRLVSGQTVEGTVRYIS
RDASSATRTFRVEVAIPNADGSVPAGMTAEIQLSALPTDAVLLPRSVVTLGDKGDLGIRAVGKDNRVAFFPIDLVDDTPT
GLVLGGIPDDARIIVAGQELVKEGDEVKPVEADQATINKLIGEATAGTQ

Specific function: May contribute to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=341, Percent_Identity=22.8739002932551, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 38863; Mature: 38732

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGEFSSVGSVAANKAKAAEVEPGKAADASKPKTAEAEPKAPLRTVAVVTPPRRTYARA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHE
IRISGLTEADKRAVLATRVAGVIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVA
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHH
QRQAELDASLRLMKTGNLPKLQLDTARSNLTLAQSQLDTAQAELDRNEVKAPFDGVIDRV
HHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHCHHHCCCCHHHHHHHC
PVELGSSVMQGGEVATILKLDPVIARGEISERDLGYLKIGDKAGVRLVSGQTVEGTVRYI
CHHHCHHHHCCCCEEEEEEECCEEECCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHH
SRDASSATRTFRVEVAIPNADGSVPAGMTAEIQLSALPTDAVLLPRSVVTLGDKGDLGIR
HCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEECCCEEEEECCCCCCCEE
AVGKDNRVAFFPIDLVDDTPTGLVLGGIPDDARIIVAGQELVKEGDEVKPVEADQATINK
EECCCCEEEEEEEEEECCCCCCEEEECCCCCCEEEEECHHHHHCCCCCCCCCCHHHHHHH
LIGEATAGTQ
HHHCCCCCCC
>Mature Secondary Structure 
ATGEFSSVGSVAANKAKAAEVEPGKAADASKPKTAEAEPKAPLRTVAVVTPPRRTYARA
CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHE
IRISGLTEADKRAVLATRVAGVIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVA
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEECCCHHHHHHHHHHHHH
QRQAELDASLRLMKTGNLPKLQLDTARSNLTLAQSQLDTAQAELDRNEVKAPFDGVIDRV
HHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHHHHHHHHHHHHCHHHCCCCHHHHHHHC
PVELGSSVMQGGEVATILKLDPVIARGEISERDLGYLKIGDKAGVRLVSGQTVEGTVRYI
CHHHCHHHHCCCCEEEEEEECCEEECCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHH
SRDASSATRTFRVEVAIPNADGSVPAGMTAEIQLSALPTDAVLLPRSVVTLGDKGDLGIR
HCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEECCCEEEEECCCCCCCEE
AVGKDNRVAFFPIDLVDDTPTGLVLGGIPDDARIIVAGQELVKEGDEVKPVEADQATINK
EECCCCEEEEEEEEEECCCCCCEEEECCCCCCEEEEECHHHHHCCCCCCCCCCHHHHHHH
LIGEATAGTQ
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]