| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is glnH [H]
Identifier: 13473258
GI number: 13473258
Start: 3050593
End: 3051423
Strand: Direct
Name: glnH [H]
Synonym: mlr3796
Alternate gene names: 13473258
Gene position: 3050593-3051423 (Clockwise)
Preceding gene: 13473256
Following gene: 13473259
Centisome position: 43.36
GC content: 63.42
Gene sequence:
>831_bases ATGGCGGGACTGGCGACGGCCGGCGTGCTGGCAACCGTCGATGCGCAGAAGGCCGCCGCCCAGGCCGCATCCGACAGCCT GCTGCGCACCGTGCTCGACCGCGGCAAGCTGATCGTCGGCACCGGCAGCACCAACGCGCCGTGGCATTTCGAGAACGATG CCGGCGAACTGGTCGGCATGGACATCACCATGGGACGCATCCTGGCCAAGGGTCTTTTCGATGACCCGACCAAGGTCGAA TTCGTCATGCAGGACCCGGCGCAGCGCATTCCCAACGTCACCACCAACAAGGTCGACATCACCATCCAGTTCATGACGAT GACGGCGCAGCGCTCGCAGCTGATCAACTTCTCCCGGCCCTACTACGTCGAAGGCGTTGCCTTGCTGACGCTGCCCACCG CCGAGAACAAGACCTTCGACAAGCTGCTCGCCGGCGGTTCGGCAACGCGCATCTCCATCCTGCAGAATGTCGATGCCGAA AGCTCCGTCCACTATGCCTTGCCACAGGCACAGGTGCTGCAGATCGACACCCAGGCCAACGTGCTGCAGGCGCTGGAATC CAAGCGCGCCGACGCCGCCGCGGTCGATCTGTCCACCGTGCGCTGGCTCGCCTCGCGCAATCCGGACAAATATTTCGATG CCGGCAAGAGCTGGTATTCGATGCTCTACGGCGCTGCCTTGCGGCAAGGCGATCTCGACTGGCTGACCTTCGTCAACCAG ACCTTCACCATCGCCATGTTCGGCCATGAATCGGCGCTCTACGATGCTGCCTTCAAGGATTATTTCGGCCAGGAGCCGCC GGCACGCCACCCCGGCTTCCCGGTCATCTGA
Upstream 100 bases:
>100_bases GAAGCGCCGACGTGTGTCTTGCCTGTGCATGGGGAACACAACACGAAAGGAGGTCGCCGTGAACGACACATCCGGAAGAC GTGATTTTCTGAAATTGGGA
Downstream 100 bases:
>100_bases TCCGGATTGCGGAAGGGCGGTCCAGCCCTTCCGCAATCCACTCGACGCCCTTCGCACAAAGGCGCAAGCATGGGCTATGC CCTGAATTTCAACCTGATCT
Product: glutamine-binding protein, glutamine ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVE FVMQDPAQRIPNVTTNKVDITIQFMTMTAQRSQLINFSRPYYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAE SSVHYALPQAQVLQIDTQANVLQALESKRADAAAVDLSTVRWLASRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQ TFTIAMFGHESALYDAAFKDYFGQEPPARHPGFPVI
Sequences:
>Translated_276_residues MAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVE FVMQDPAQRIPNVTTNKVDITIQFMTMTAQRSQLINFSRPYYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAE SSVHYALPQAQVLQIDTQANVLQALESKRADAAAVDLSTVRWLASRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQ TFTIAMFGHESALYDAAFKDYFGQEPPARHPGFPVI >Mature_275_residues AGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGMDITMGRILAKGLFDDPTKVEF VMQDPAQRIPNVTTNKVDITIQFMTMTAQRSQLINFSRPYYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAES SVHYALPQAQVLQIDTQANVLQALESKRADAAAVDLSTVRWLASRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQT FTIAMFGHESALYDAAFKDYFGQEPPARHPGFPVI
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=223, Percent_Identity=26.9058295964126, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788648, Length=160, Percent_Identity=28.125, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30067; Mature: 29936
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGM CCCCHHCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEE DITMGRILAKGLFDDPTKVEFVMQDPAQRIPNVTTNKVDITIQFMTMTAQRSQLINFSRP EEHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHCCCCC YYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAESSVHYALPQAQVLQIDTQAN EEECCEEEEEECCCCCCHHHHHHCCCCCCEEHEECCCCCCCCEEEECCCCEEEEECCHHH VLQALESKRADAAAVDLSTVRWLASRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQ HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHCC TFTIAMFGHESALYDAAFKDYFGQEPPARHPGFPVI EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AGLATAGVLATVDAQKAAAQAASDSLLRTVLDRGKLIVGTGSTNAPWHFENDAGELVGM CCCHHCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEE DITMGRILAKGLFDDPTKVEFVMQDPAQRIPNVTTNKVDITIQFMTMTAQRSQLINFSRP EEHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEHHHHHHHHCCCCC YYVEGVALLTLPTAENKTFDKLLAGGSATRISILQNVDAESSVHYALPQAQVLQIDTQAN EEECCEEEEEECCCCCCHHHHHHCCCCCCEEHEECCCCCCCCEEEECCCCEEEEECCHHH VLQALESKRADAAAVDLSTVRWLASRNPDKYFDAGKSWYSMLYGAALRQGDLDWLTFVNQ HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHCC TFTIAMFGHESALYDAAFKDYFGQEPPARHPGFPVI EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]