| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473244
Identifier: 13473244
GI number: 13473244
Start: 3038264
End: 3038869
Strand: Reverse
Name: 13473244
Synonym: mll3781
Alternate gene names: NA
Gene position: 3038869-3038264 (Counterclockwise)
Preceding gene: 13473245
Following gene: 13473241
Centisome position: 43.19
GC content: 60.73
Gene sequence:
>606_bases ATGGCCGGGGCACAGGCTCAGGCTGCACCGGCGCGCAGCGCGCGCCGGCCCTTCAAGTGCCGAGCCTCTGTCTCACGCTG CTCCAAGCCGGCTGACATGGTTGTTGCATCCGGTCTTCGACCGTGTTTGCGGCTTCGCACGAAAAATCTTGACGGCGTGG CGGTGGCGCATTCTACAGAAGGTGCCCCCATATGGAGACGCCAGATGTTCGGTGCCGTCCCGCTTTTGATCGTGCCTTTC ATTCTCTACAATCTTGGCTTGCTCGGAATTTTCGGCGGCGGCGACGACCCGTGGGAGAACGAGATCTTCTCGTTCCGCAT GATGTCGGGCGGGGTGTTCTCGATGACGCTCGGCGACCTGATGATACTGATCGGGCTGATCGTCCTGTTCCTCGAAATGG TGAAGTCTGCGCGCACGACCGGCGCTTCGATCATGGATCATCTCCTGTCGACGCTGGTCTTCGTCGCTTTCCTGGTCGAG TTCCTGCTGGTCAAGGGCGCGGCGCACTCGATCTTCTTCACGCTGATGATCATCGCGCTGTTCGATGTGCTGGCCGGTTT CGCGGTGTCGATGCGGTCGGCGAGCCGGGACATCAACCTCAACTAG
Upstream 100 bases:
>100_bases CAGGTGCTGACCCCCAAGGAAAGCTGAGATCAGCTTTTTTGAAGGGTTAGTTGCAAAAGACCGGCCTCAGGCCGGTCTTT TTTTGCGTTTGACGAACCTA
Downstream 100 bases:
>100_bases TACTCAGCCTGGATCTGCGGTGAAGCCGGCGGCCTCGATGCCGGCGATGGCCGCGGCCTCGTCATTGTCCGACGTGTCGC CTGAAATGCCGACGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAGAQAQAAPARSARRPFKCRASVSRCSKPADMVVASGLRPCLRLRTKNLDGVAVAHSTEGAPIWRRQMFGAVPLLIVPF ILYNLGLLGIFGGGDDPWENEIFSFRMMSGGVFSMTLGDLMILIGLIVLFLEMVKSARTTGASIMDHLLSTLVFVAFLVE FLLVKGAAHSIFFTLMIIALFDVLAGFAVSMRSASRDINLN
Sequences:
>Translated_201_residues MAGAQAQAAPARSARRPFKCRASVSRCSKPADMVVASGLRPCLRLRTKNLDGVAVAHSTEGAPIWRRQMFGAVPLLIVPF ILYNLGLLGIFGGGDDPWENEIFSFRMMSGGVFSMTLGDLMILIGLIVLFLEMVKSARTTGASIMDHLLSTLVFVAFLVE FLLVKGAAHSIFFTLMIIALFDVLAGFAVSMRSASRDINLN >Mature_200_residues AGAQAQAAPARSARRPFKCRASVSRCSKPADMVVASGLRPCLRLRTKNLDGVAVAHSTEGAPIWRRQMFGAVPLLIVPFI LYNLGLLGIFGGGDDPWENEIFSFRMMSGGVFSMTLGDLMILIGLIVLFLEMVKSARTTGASIMDHLLSTLVFVAFLVEF LLVKGAAHSIFFTLMIIALFDVLAGFAVSMRSASRDINLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21756; Mature: 21625
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAQAQAAPARSARRPFKCRASVSRCSKPADMVVASGLRPCLRLRTKNLDGVAVAHSTE CCCCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC GAPIWRRQMFGAVPLLIVPFILYNLGLLGIFGGGDDPWENEIFSFRMMSGGVFSMTLGDL CCHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH MILIGLIVLFLEMVKSARTTGASIMDHLLSTLVFVAFLVEFLLVKGAAHSIFFTLMIIAL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FDVLAGFAVSMRSASRDINLN HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AGAQAQAAPARSARRPFKCRASVSRCSKPADMVVASGLRPCLRLRTKNLDGVAVAHSTE CCCCCCCCCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC GAPIWRRQMFGAVPLLIVPFILYNLGLLGIFGGGDDPWENEIFSFRMMSGGVFSMTLGDL CCHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHH MILIGLIVLFLEMVKSARTTGASIMDHLLSTLVFVAFLVEFLLVKGAAHSIFFTLMIIAL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FDVLAGFAVSMRSASRDINLN HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA