Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473228

Identifier: 13473228

GI number: 13473228

Start: 3027279

End: 3027767

Strand: Reverse

Name: 13473228

Synonym: mll3761

Alternate gene names: NA

Gene position: 3027767-3027279 (Counterclockwise)

Preceding gene: 13473232

Following gene: 13473227

Centisome position: 43.03

GC content: 57.06

Gene sequence:

>489_bases
GTGTCCAATATCGATGTCGAAAAATTCGCCTCAATTGCCCCGGATGCGACGTTCGGCATACATATCAGGCCAGCCGATAT
CCTTGCGGATGTCCGCGGGCAGCGTGTTCAGGAAACGCTGCGTGCGAATTTCGTTGCGCATGGTGCGAACCTTGCCGACA
TAGTGCTGCATGCCGCGCAGGATGGTGAAACCGTTCATGACTATTCTCCTCTCTTTAACTGGAGGCAGTATCGCATACCC
CTCCTGACAGCAGTCTGTCAGGAGGATGGCAGGGCGCGCGACGATCGCTCCGGTTGTTGGAAGCGTCCTCGGATGGTGAC
CCTTCGACCAGCTCATGGATGGGGATTGTTCACCACAACGGCGCCCGGAGGGGCATCGTTGTTCAGTCATGGACGACGGA
CTGTCGGGATCGGCGGCCTTCAGCGAGGTGACCGGAGTTCTGATATGAAGGGAGAAAATTCTTCCCCAAAGCCAGGGAGA
CGACCATGA

Upstream 100 bases:

>100_bases
CAAAACCTTCGATGAAGACGAAGCCGATTGTCTTCTGATCAGGCATAAGCTCGCTCCGTCCCCCAGCGCGCCGCACCTAT
ATCTGGGCATTGGCGCATCC

Downstream 100 bases:

>100_bases
GCCTGCAACTGACAGGAATCCACCATCTGACCGCCATCACCGCCAACGCACCGGGCAATCTTCATTTCTACACGAAGGTG
CTGGGCTTGCGGCTGGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSNIDVEKFASIAPDATFGIHIRPADILADVRGQRVQETLRANFVAHGANLADIVLHAAQDGETVHDYSPLFNWRQYRIP
LLTAVCQEDGRARDDRSGCWKRPRMVTLRPAHGWGLFTTTAPGGASLFSHGRRTVGIGGLQRGDRSSDMKGENSSPKPGR
RP

Sequences:

>Translated_162_residues
MSNIDVEKFASIAPDATFGIHIRPADILADVRGQRVQETLRANFVAHGANLADIVLHAAQDGETVHDYSPLFNWRQYRIP
LLTAVCQEDGRARDDRSGCWKRPRMVTLRPAHGWGLFTTTAPGGASLFSHGRRTVGIGGLQRGDRSSDMKGENSSPKPGR
RP
>Mature_161_residues
SNIDVEKFASIAPDATFGIHIRPADILADVRGQRVQETLRANFVAHGANLADIVLHAAQDGETVHDYSPLFNWRQYRIPL
LTAVCQEDGRARDDRSGCWKRPRMVTLRPAHGWGLFTTTAPGGASLFSHGRRTVGIGGLQRGDRSSDMKGENSSPKPGRR
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17800; Mature: 17669

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIDVEKFASIAPDATFGIHIRPADILADVRGQRVQETLRANFVAHGANLADIVLHAAQ
CCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCC
DGETVHDYSPLFNWRQYRIPLLTAVCQEDGRARDDRSGCWKRPRMVTLRPAHGWGLFTTT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC
APGGASLFSHGRRTVGIGGLQRGDRSSDMKGENSSPKPGRRP
CCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNIDVEKFASIAPDATFGIHIRPADILADVRGQRVQETLRANFVAHGANLADIVLHAAQ
CCCCHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCC
DGETVHDYSPLFNWRQYRIPLLTAVCQEDGRARDDRSGCWKRPRMVTLRPAHGWGLFTTT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC
APGGASLFSHGRRTVGIGGLQRGDRSSDMKGENSSPKPGRRP
CCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA