| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473225
Identifier: 13473225
GI number: 13473225
Start: 3024332
End: 3025126
Strand: Direct
Name: 13473225
Synonym: mlr3755
Alternate gene names: NA
Gene position: 3024332-3025126 (Clockwise)
Preceding gene: 13473224
Following gene: 13473226
Centisome position: 42.98
GC content: 58.99
Gene sequence:
>795_bases ATGTCGGTTTGCGCTCGTCCCGAACGTCCTTGGGATGAGAGAGACAGGGAGAGGTTCATGCATCGCAACAAGGTCGTTTC ACGCGAAGACTGGTTCCAGGCGCACAAGGCGCATCTGGCGCGTGAGAAGGAACTGACGCGGTTGCGCGAACGTGTTGCGG CCGAGCGGCGGGAACTGCCCTGGCTGAAAGTAAGGAAGGACTACGTCTTTGAGACGGAGCAAGGGCCGAAGAAACTGGCC GAGCTTTTCGCCAACCGCAGCCAGTTGATCGTCTACCACTTCGTGTTCGCGCCAGGTTCCACCCATCACTGCGAAAGCTG TGCCTTCGTCGCCGACCATATGGACGGCGCCAACCGGCATCTCAGGCATCATGACGTGTCGCTTGTCACCATATCACGGG CGCCGCTCGTCGAGCTGCTGCCCTACAAGCAGCGCATGGGCTGGACATTCGACTGGGTGTCTTCCTATGCGTCGGACTTC AACTTCGATATGCAGGTGTCCTTCACCGACAGACAGATCGCATCCGGCGAAGCGGTCTACAATTTCGAAACACCGGTGCT GACGTCGAAGGACCTGCCCGGCACCACCGTCTTCTACAAGGGCGAAACCGGTGACATCTTTCTGACCTTCATGTCACGCG CCCGCGGCAGCGAGCAGTTCATCGGCGCCTACCAGTACCTCGACATTGCACCGAAAGGTCGTGACGAGACCGGTCCATAC GGGACCTTCATGGACTGGGTGCGGCTGCACGATGAATATGGCAACAGGTCGCAACGGGACGATGTATGCCCTTAG
Upstream 100 bases:
>100_bases TCCGTCATCGTTCAAACCCGGGCCAATGCGCCCGGGTTTTTGTTGTCTGCGATTTGGGGGAAGACCTCTTCATCCCTATT TCCTCTGGGCGTTGCCGGCG
Downstream 100 bases:
>100_bases AGCAATTCCAGGAAAAGTGTGAGCGGTTTTCCGTTCGGAATTGCGTCAAAACAAAGAGTTAGAGTGGTTCGCCGTTTCCA TGAAACGGTGGACCGCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSVCARPERPWDERDRERFMHRNKVVSREDWFQAHKAHLAREKELTRLRERVAAERRELPWLKVRKDYVFETEQGPKKLA ELFANRSQLIVYHFVFAPGSTHHCESCAFVADHMDGANRHLRHHDVSLVTISRAPLVELLPYKQRMGWTFDWVSSYASDF NFDMQVSFTDRQIASGEAVYNFETPVLTSKDLPGTTVFYKGETGDIFLTFMSRARGSEQFIGAYQYLDIAPKGRDETGPY GTFMDWVRLHDEYGNRSQRDDVCP
Sequences:
>Translated_264_residues MSVCARPERPWDERDRERFMHRNKVVSREDWFQAHKAHLAREKELTRLRERVAAERRELPWLKVRKDYVFETEQGPKKLA ELFANRSQLIVYHFVFAPGSTHHCESCAFVADHMDGANRHLRHHDVSLVTISRAPLVELLPYKQRMGWTFDWVSSYASDF NFDMQVSFTDRQIASGEAVYNFETPVLTSKDLPGTTVFYKGETGDIFLTFMSRARGSEQFIGAYQYLDIAPKGRDETGPY GTFMDWVRLHDEYGNRSQRDDVCP >Mature_263_residues SVCARPERPWDERDRERFMHRNKVVSREDWFQAHKAHLAREKELTRLRERVAAERRELPWLKVRKDYVFETEQGPKKLAE LFANRSQLIVYHFVFAPGSTHHCESCAFVADHMDGANRHLRHHDVSLVTISRAPLVELLPYKQRMGWTFDWVSSYASDFN FDMQVSFTDRQIASGEAVYNFETPVLTSKDLPGTTVFYKGETGDIFLTFMSRARGSEQFIGAYQYLDIAPKGRDETGPYG TFMDWVRLHDEYGNRSQRDDVCP
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30909; Mature: 30778
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVCARPERPWDERDRERFMHRNKVVSREDWFQAHKAHLAREKELTRLRERVAAERRELP CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WLKVRKDYVFETEQGPKKLAELFANRSQLIVYHFVFAPGSTHHCESCAFVADHMDGANRH EEEECCCCEEECCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHH LRHHDVSLVTISRAPLVELLPYKQRMGWTFDWVSSYASDFNFDMQVSFTDRQIASGEAVY HHHCCEEEEEECCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEE NFETPVLTSKDLPGTTVFYKGETGDIFLTFMSRARGSEQFIGAYQYLDIAPKGRDETGPY EECCCEEECCCCCCCEEEEECCCCCEEEEEHHHCCCCHHHHHHHHEEEECCCCCCCCCCC GTFMDWVRLHDEYGNRSQRDDVCP HHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SVCARPERPWDERDRERFMHRNKVVSREDWFQAHKAHLAREKELTRLRERVAAERRELP CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WLKVRKDYVFETEQGPKKLAELFANRSQLIVYHFVFAPGSTHHCESCAFVADHMDGANRH EEEECCCCEEECCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHH LRHHDVSLVTISRAPLVELLPYKQRMGWTFDWVSSYASDFNFDMQVSFTDRQIASGEAVY HHHCCEEEEEECCCCHHHHCCHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEE NFETPVLTSKDLPGTTVFYKGETGDIFLTFMSRARGSEQFIGAYQYLDIAPKGRDETGPY EECCCEEECCCCCCCEEEEECCCCCEEEEEHHHCCCCHHHHHHHHEEEECCCCCCCCCCC GTFMDWVRLHDEYGNRSQRDDVCP HHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA