| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is blh [H]
Identifier: 13473216
GI number: 13473216
Start: 3013681
End: 3014541
Strand: Reverse
Name: blh [H]
Synonym: mll3743
Alternate gene names: 13473216
Gene position: 3014541-3013681 (Counterclockwise)
Preceding gene: 13473217
Following gene: 13473213
Centisome position: 42.84
GC content: 63.07
Gene sequence:
>861_bases TTGGCAAGACCTGAGGTCAGGGGCTTTTACGACAAGCCGACCGGAGCCATTCAATATGTCGTCACCGATCCGGCGACAAG GCGCTGCGCCATCATCGATCCGATCCTCGACTTCGATGAGAAATCCGGTGCGACGGGAACGAAGAGCGCGGATGCCCTGC TCGATTTCGTGGGGGAGAACGGACTGGAGCCCGAGTGGATCCTCGACACCCACCCGCATGCCGATCATTTCTCGGCCGCG CACTATCTGAAACAGAAGACCGGGGCGCCGACGGCGATCGGTAACAGAATCGTCGACGTCCAGAACCTGTGGAAGGCGAT CTATAACTGGCCGGATTTTCCCGCCGACGGTTCGCAGTGGGACAGGCTGTTCAGGGAAGGTGAGACCTTCCTGATTGGGA CCCTTCCGGTCAAGGTGCTGTTCTCACCCGGACATACACTGGCTTCGATCACCTATGTGATCGGCGACGCCGCCTTCGTG CACGACACGCTGTTCATGCCCGACAGCGGTACGGCGCGGGCGGATTTCCCCGGCGGGAGTGCCGCGCGGCTGTGGCGCTC GATCCAGGAGATACTGGCGCTGCCCGATGAGACGCGCGTCTTCGTCGGCCATGACTATCAGGCCGGCGGCCGCGAGCCCT TGTGGGAGAGCACGGTGGCCGCGCAGAGGGCCAGCAATATCCATCTCGCTGCCGCGCACAGCGAGGCCGAGTTCGTGGCG CTGCGCGAGGCACGCGACAAGACATTGCCGATGCCGCGGCTGATCCTGCACGCGCTGCAGGTCAACATGAATGGCGGCCG GCTGCCGGAACCGGAAGCCAATGGCCGGCGGTATCTGAAATTTCCGCTGGATGGGCTTTGA
Upstream 100 bases:
>100_bases TGACTGGCCTGCCTCGGTGGACAACCATGCTCCTGTTGGAGCTTGGCGGAGAAAATCGTTCCTGTCGGCTGGGTTGGGGG AGTTCGGCTTGGAATTGGCT
Downstream 100 bases:
>100_bases GGCGATCGCCGCGACACCCCGCGTACGAAAAAGGCGGCGCCAGTATCCTGGCGCCGCCTTGATGTTTTGTCGCCGAAGCT GGCTTAAGCCGCCGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MARPEVRGFYDKPTGAIQYVVTDPATRRCAIIDPILDFDEKSGATGTKSADALLDFVGENGLEPEWILDTHPHADHFSAA HYLKQKTGAPTAIGNRIVDVQNLWKAIYNWPDFPADGSQWDRLFREGETFLIGTLPVKVLFSPGHTLASITYVIGDAAFV HDTLFMPDSGTARADFPGGSAARLWRSIQEILALPDETRVFVGHDYQAGGREPLWESTVAAQRASNIHLAAAHSEAEFVA LREARDKTLPMPRLILHALQVNMNGGRLPEPEANGRRYLKFPLDGL
Sequences:
>Translated_286_residues MARPEVRGFYDKPTGAIQYVVTDPATRRCAIIDPILDFDEKSGATGTKSADALLDFVGENGLEPEWILDTHPHADHFSAA HYLKQKTGAPTAIGNRIVDVQNLWKAIYNWPDFPADGSQWDRLFREGETFLIGTLPVKVLFSPGHTLASITYVIGDAAFV HDTLFMPDSGTARADFPGGSAARLWRSIQEILALPDETRVFVGHDYQAGGREPLWESTVAAQRASNIHLAAAHSEAEFVA LREARDKTLPMPRLILHALQVNMNGGRLPEPEANGRRYLKFPLDGL >Mature_285_residues ARPEVRGFYDKPTGAIQYVVTDPATRRCAIIDPILDFDEKSGATGTKSADALLDFVGENGLEPEWILDTHPHADHFSAAH YLKQKTGAPTAIGNRIVDVQNLWKAIYNWPDFPADGSQWDRLFREGETFLIGTLPVKVLFSPGHTLASITYVIGDAAFVH DTLFMPDSGTARADFPGGSAARLWRSIQEILALPDETRVFVGHDYQAGGREPLWESTVAAQRASNIHLAAAHSEAEFVAL REARDKTLPMPRLILHALQVNMNGGRLPEPEANGRRYLKFPLDGL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=264, Percent_Identity=27.6515151515151, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538952, Length=267, Percent_Identity=27.7153558052434, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI221330176, Length=263, Percent_Identity=28.1368821292776, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31554; Mature: 31423
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPEVRGFYDKPTGAIQYVVTDPATRRCAIIDPILDFDEKSGATGTKSADALLDFVGEN CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHCCCCCCCCCCCCHHHHHHHHHCCC GLEPEWILDTHPHADHFSAAHYLKQKTGAPTAIGNRIVDVQNLWKAIYNWPDFPADGSQW CCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHCCEEECHHHHHHHHHCCCCCCCCCHHH DRLFREGETFLIGTLPVKVLFSPGHTLASITYVIGDAAFVHDTLFMPDSGTARADFPGGS HHHHHCCCEEEEEECEEEEEECCCCHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCH AARLWRSIQEILALPDETRVFVGHDYQAGGREPLWESTVAAQRASNIHLAAAHSEAEFVA HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHH LREARDKTLPMPRLILHALQVNMNGGRLPEPEANGRRYLKFPLDGL HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure ARPEVRGFYDKPTGAIQYVVTDPATRRCAIIDPILDFDEKSGATGTKSADALLDFVGEN CCCCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHCCCCCCCCCCCCHHHHHHHHHCCC GLEPEWILDTHPHADHFSAAHYLKQKTGAPTAIGNRIVDVQNLWKAIYNWPDFPADGSQW CCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHCCEEECHHHHHHHHHCCCCCCCCCHHH DRLFREGETFLIGTLPVKVLFSPGHTLASITYVIGDAAFVHDTLFMPDSGTARADFPGGS HHHHHCCCEEEEEECEEEEEECCCCHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCH AARLWRSIQEILALPDETRVFVGHDYQAGGREPLWESTVAAQRASNIHLAAAHSEAEFVA HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHH LREARDKTLPMPRLILHALQVNMNGGRLPEPEANGRRYLKFPLDGL HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]