| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473189
Identifier: 13473189
GI number: 13473189
Start: 2986533
End: 2986829
Strand: Direct
Name: 13473189
Synonym: msr3706
Alternate gene names: NA
Gene position: 2986533-2986829 (Clockwise)
Preceding gene: 13473188
Following gene: 13473190
Centisome position: 42.45
GC content: 60.27
Gene sequence:
>297_bases GTGAGCGGTCGCCGGCTGCAATCAACGATCCTTAACCGGCTGTTCACCATACGAGCGGATGCTGTTTTACCCAGATGCCG CTGCGATCCACTGGGTTGCGGCACGGTGTGGGAGGAATGCTTGACGGTCATCGACATGAACAGACTGGAACAGGCCGCCC GTGTTTCGGTGGGCGACTTCCACGATCCCGAAGCATCCGCAGAACCGCTTGCCTCGCCGCATCACACATTGCCGTGGGGC ATCGTCCTGGCGGCGGCCTCGACAATTCTCCTCATCGCCCTGTTCAATCTGACCTGA
Upstream 100 bases:
>100_bases GGGTGGTGCCGGCATCCCTGAGCGGAACCGCAAGCCTCGACATCGCGGACGGCCGCCTTGAATACCGTCTTGTCGTCCCG CACAGCAATTTCGAGACGCA
Downstream 100 bases:
>100_bases CCGAACATTCCCTGCCGACAACAGTGCGCGCTGTTAACCGCTTGCAGCGCCGGCATTATTCGCATGTCCCCCCGACCGCT CCGGAACTTTTGGCCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSGRRLQSTILNRLFTIRADAVLPRCRCDPLGCGTVWEECLTVIDMNRLEQAARVSVGDFHDPEASAEPLASPHHTLPWG IVLAAASTILLIALFNLT
Sequences:
>Translated_98_residues MSGRRLQSTILNRLFTIRADAVLPRCRCDPLGCGTVWEECLTVIDMNRLEQAARVSVGDFHDPEASAEPLASPHHTLPWG IVLAAASTILLIALFNLT >Mature_97_residues SGRRLQSTILNRLFTIRADAVLPRCRCDPLGCGTVWEECLTVIDMNRLEQAARVSVGDFHDPEASAEPLASPHHTLPWGI VLAAASTILLIALFNLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10726; Mature: 10594
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRRLQSTILNRLFTIRADAVLPRCRCDPLGCGTVWEECLTVIDMNRLEQAARVSVGDF CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC HDPEASAEPLASPHHTLPWGIVLAAASTILLIALFNLT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGRRLQSTILNRLFTIRADAVLPRCRCDPLGCGTVWEECLTVIDMNRLEQAARVSVGDF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC HDPEASAEPLASPHHTLPWGIVLAAASTILLIALFNLT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA