| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is bmrU [H]
Identifier: 13473177
GI number: 13473177
Start: 2977802
End: 2978905
Strand: Direct
Name: bmrU [H]
Synonym: mlr3686
Alternate gene names: 13473177
Gene position: 2977802-2978905 (Clockwise)
Preceding gene: 13473175
Following gene: 13473179
Centisome position: 42.32
GC content: 63.77
Gene sequence:
>1104_bases ATGCTGTTGTTCCGACAAAATTGGCGTGGATTTCGCGCCGGAAAAACACGCAGCAGTTGCGCGGGCGGCTGTGAACACGC GCTGAATCGCACCGTTTCCAACGGAACCTTTCCGGCATCGCCACGTTTCAGCCTGCGGCTGGGTTCGTCCCGGCCCTTTT GGGCTGACCTAACGGAGCGGGGCATGAAATTTGCTGCGGTGCTGAACCGGGATGGCGGCACCTTGCGCACCACCGACCTC GCCGCCTTTTCCGACAGGATGCGCCAGACGCTGGAGGCGGCAGGCCATTCCTTGAGCATTGACGTGGTTGCCGGCAAGGA CGTTGTGGAAACCCTCGACAACGCTGCCTCGCGCCGCGCCGTCGATGTCGTGCTGGCGGGTGGCGGCGACGGAACCATTT CGGCGGCGGCCGCGAGGCTGATGGGCAAGAAAAAGGCGCTTGCCATCCTGCCGGCCGGCACCATGAACCTGTTCGCGCGT GGCCTGGGCATTCCGCAGTCGCTCGACGCCGCGCTGAAATCCTTCGCCGACGGTGAGATCATCGCCGTCGACATGGCCAC CGCCAACGGCCGGCCCTTCATCCACCAGTTCTCGATCGGCATGCACGCCAAGATGGTGCAGTTGCGCCAGGGAATGGAAT TCGGCTCGCGGCTGGGCAAGATCGGTGCTTCGGCCAAGGCGGCATGGGCGACAATCAACAACCCGCCGGCGATGAACGTC ACGCTCGCTGTCGGCAAGGCCGAGATGACGGCGCGCATCTCAGGCATCGGCGTCACCAACAATCTGTTCGGCGAAGGCCA TCTGCCCTATGCGGACAACCCTTCGGGTGGGGTGCTCGGCATCTATGTCACGGTGGCGCAGCAGCGCGCCGAACTGGTGA AATTCTTCTTCGACGTGGCGCGCGGCAGATGGCGCGACAATGAACATGTCGAAATCCATCAGGCCGACCGCACCGTCCTG AAAATCCATTCCGGCAGCAGAAAGTTCCGCGCCGTCATGGATGGCGAATTGGTCAGGCTCGAGCGGGAGACGACGATCGA AATCCGGCCCGGCGCGCTGAATGTCCTGGTGCCGGCCAGCATCGCCGCGGCTAAGGCCGCCTGA
Upstream 100 bases:
>100_bases TAGTCTCTCCTGGTGCGTGATTTCGTGCACGCCGCGCCCGCTTGAACCGTCGCTGGGAAGATCGGGCGCGGCATCTCCAC GGGTTCACAACGTCGTGACC
Downstream 100 bases:
>100_bases TGCGATCTCCAACGATGACGGCCGAAAATCTAGCCGCTCGGCGCACTTCCTTGCTGCGTCGCCGGTGTCTTGGCCACCTC GCCATAGATTTCAGCGATGC
Product: multidrug resistance protein BmrU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MLLFRQNWRGFRAGKTRSSCAGGCEHALNRTVSNGTFPASPRFSLRLGSSRPFWADLTERGMKFAAVLNRDGGTLRTTDL AAFSDRMRQTLEAAGHSLSIDVVAGKDVVETLDNAASRRAVDVVLAGGGDGTISAAAARLMGKKKALAILPAGTMNLFAR GLGIPQSLDAALKSFADGEIIAVDMATANGRPFIHQFSIGMHAKMVQLRQGMEFGSRLGKIGASAKAAWATINNPPAMNV TLAVGKAEMTARISGIGVTNNLFGEGHLPYADNPSGGVLGIYVTVAQQRAELVKFFFDVARGRWRDNEHVEIHQADRTVL KIHSGSRKFRAVMDGELVRLERETTIEIRPGALNVLVPASIAAAKAA
Sequences:
>Translated_367_residues MLLFRQNWRGFRAGKTRSSCAGGCEHALNRTVSNGTFPASPRFSLRLGSSRPFWADLTERGMKFAAVLNRDGGTLRTTDL AAFSDRMRQTLEAAGHSLSIDVVAGKDVVETLDNAASRRAVDVVLAGGGDGTISAAAARLMGKKKALAILPAGTMNLFAR GLGIPQSLDAALKSFADGEIIAVDMATANGRPFIHQFSIGMHAKMVQLRQGMEFGSRLGKIGASAKAAWATINNPPAMNV TLAVGKAEMTARISGIGVTNNLFGEGHLPYADNPSGGVLGIYVTVAQQRAELVKFFFDVARGRWRDNEHVEIHQADRTVL KIHSGSRKFRAVMDGELVRLERETTIEIRPGALNVLVPASIAAAKAA >Mature_367_residues MLLFRQNWRGFRAGKTRSSCAGGCEHALNRTVSNGTFPASPRFSLRLGSSRPFWADLTERGMKFAAVLNRDGGTLRTTDL AAFSDRMRQTLEAAGHSLSIDVVAGKDVVETLDNAASRRAVDVVLAGGGDGTISAAAARLMGKKKALAILPAGTMNLFAR GLGIPQSLDAALKSFADGEIIAVDMATANGRPFIHQFSIGMHAKMVQLRQGMEFGSRLGKIGASAKAAWATINNPPAMNV TLAVGKAEMTARISGIGVTNNLFGEGHLPYADNPSGGVLGIYVTVAQQRAELVKFFFDVARGRWRDNEHVEIHQADRTVL KIHSGSRKFRAVMDGELVRLERETTIEIRPGALNVLVPASIAAAKAA
Specific function: May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro [H]
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=78, Percent_Identity=47.4358974358974, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: NA
Molecular weight: Translated: 39167; Mature: 39167
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLFRQNWRGFRAGKTRSSCAGGCEHALNRTVSNGTFPASPRFSLRLGSSRPFWADLTER CEEECCCCCCCCCCCCCCHHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHC GMKFAAVLNRDGGTLRTTDLAAFSDRMRQTLEAAGHSLSIDVVAGKDVVETLDNAASRRA CCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCE VDVVLAGGGDGTISAAAARLMGKKKALAILPAGTMNLFARGLGIPQSLDAALKSFADGEI EEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCE IAVDMATANGRPFIHQFSIGMHAKMVQLRQGMEFGSRLGKIGASAKAAWATINNPPAMNV EEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEE TLAVGKAEMTARISGIGVTNNLFGEGHLPYADNPSGGVLGIYVTVAQQRAELVKFFFDVA EEEECCCEEEEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH RGRWRDNEHVEIHQADRTVLKIHSGSRKFRAVMDGELVRLERETTIEIRPGALNVLVPAS HCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCEEEEEECCCEEEECCCEEEEEECCH IAAAKAA HHHHCCC >Mature Secondary Structure MLLFRQNWRGFRAGKTRSSCAGGCEHALNRTVSNGTFPASPRFSLRLGSSRPFWADLTER CEEECCCCCCCCCCCCCCHHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHC GMKFAAVLNRDGGTLRTTDLAAFSDRMRQTLEAAGHSLSIDVVAGKDVVETLDNAASRRA CCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHCCCE VDVVLAGGGDGTISAAAARLMGKKKALAILPAGTMNLFARGLGIPQSLDAALKSFADGEI EEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCE IAVDMATANGRPFIHQFSIGMHAKMVQLRQGMEFGSRLGKIGASAKAAWATINNPPAMNV EEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEE TLAVGKAEMTARISGIGVTNNLFGEGHLPYADNPSGGVLGIYVTVAQQRAELVKFFFDVA EEEECCCEEEEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH RGRWRDNEHVEIHQADRTVLKIHSGSRKFRAVMDGELVRLERETTIEIRPGALNVLVPAS HCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCEEEEEECCCEEEECCCEEEEEECCH IAAAKAA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961792; 8969508; 9384377 [H]