| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is mhqD [H]
Identifier: 13473173
GI number: 13473173
Start: 2972987
End: 2973607
Strand: Reverse
Name: mhqD [H]
Synonym: mll3682
Alternate gene names: 13473173
Gene position: 2973607-2972987 (Counterclockwise)
Preceding gene: 13473174
Following gene: 13473172
Centisome position: 42.26
GC content: 65.54
Gene sequence:
>621_bases ATGAGCAAGGACTCTTACATCAACAAGGTGCTGCCCGGTTCGCCGGGCGGCCCCATGCTTTTCGTCTTTCACGGCACCGG CGGTGACGAGAGCCAGCTTCTGTCGCCGGGGCGCGATCTCGTGCCCCAGGCCACCATCATCTCGCCGCGCGGCGATGTGT CCGAATATGGCGCGGCGCGCTTCTTTCGTCGCACCGGCGAGGGCGTCTACGACATGGACGACCTGGCGCGGGGGACGAGC AAGATGGCGGCCTTCGTCAAGGCGCATGTCGAGGCAGCGAAGCCCTCGGCGGTGCTTGGCCTCGGCTATTCCAACGGCGC CAACATATTGGCGTCCGTGGTGTTCGCCGAGCCAAAGCTGTTCGACGCCACGGTGCTGATGCATCCGCTGATCCCGTTCG AACCGCAGGTTCAGGGCAGCCTCACCGGCCGTCACATGCTGCTGACCGCCGGCAAGCGCGATCCGATCTGCCCGCCGAAC CTGACGACGCGGCTCGAGGCCTATTTGCGTGCCGACGGCGCCGATGTCACAGTGGAGTGGCACGAAGGCGGGCACGAGGT GCGGCCAAATGAAATCGAAGCGGCGCGGCGGCTCTTTGCCGGTGTCGCTCAAGGAGTTTAG
Upstream 100 bases:
>100_bases GACACTGCGCATCTGGGCGAAGCGCTGAAGCTGCCGACGCAGCATCAGCATTTGCGGCCCTATCTCGAACAGCATCTGCA GAAGCTGGAAGGCTGAGGTC
Downstream 100 bases:
>100_bases ACATGCCCGACCAACTGCCTGAAATCGAACTGGAAGACCGCGGCTCCAAAGGGCGCTATGTGCTGCGTGGCCCCGGCGGC GCCGAGGCCGAGATGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSKDSYINKVLPGSPGGPMLFVFHGTGGDESQLLSPGRDLVPQATIISPRGDVSEYGAARFFRRTGEGVYDMDDLARGTS KMAAFVKAHVEAAKPSAVLGLGYSNGANILASVVFAEPKLFDATVLMHPLIPFEPQVQGSLTGRHMLLTAGKRDPICPPN LTTRLEAYLRADGADVTVEWHEGGHEVRPNEIEAARRLFAGVAQGV
Sequences:
>Translated_206_residues MSKDSYINKVLPGSPGGPMLFVFHGTGGDESQLLSPGRDLVPQATIISPRGDVSEYGAARFFRRTGEGVYDMDDLARGTS KMAAFVKAHVEAAKPSAVLGLGYSNGANILASVVFAEPKLFDATVLMHPLIPFEPQVQGSLTGRHMLLTAGKRDPICPPN LTTRLEAYLRADGADVTVEWHEGGHEVRPNEIEAARRLFAGVAQGV >Mature_205_residues SKDSYINKVLPGSPGGPMLFVFHGTGGDESQLLSPGRDLVPQATIISPRGDVSEYGAARFFRRTGEGVYDMDDLARGTSK MAAFVKAHVEAAKPSAVLGLGYSNGANILASVVFAEPKLFDATVLMHPLIPFEPQVQGSLTGRHMLLTAGKRDPICPPNL TTRLEAYLRADGADVTVEWHEGGHEVRPNEIEAARRLFAGVAQGV
Specific function: Putative hydrolase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: NA
Molecular weight: Translated: 22028; Mature: 21897
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDSYINKVLPGSPGGPMLFVFHGTGGDESQLLSPGRDLVPQATIISPRGDVSEYGAAR CCCCCCHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH FFRRTGEGVYDMDDLARGTSKMAAFVKAHVEAAKPSAVLGLGYSNGANILASVVFAEPKL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCH FDATVLMHPLIPFEPQVQGSLTGRHMLLTAGKRDPICPPNLTTRLEAYLRADGADVTVEW HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE HEGGHEVRPNEIEAARRLFAGVAQGV CCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKDSYINKVLPGSPGGPMLFVFHGTGGDESQLLSPGRDLVPQATIISPRGDVSEYGAAR CCCCCHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHH FFRRTGEGVYDMDDLARGTSKMAAFVKAHVEAAKPSAVLGLGYSNGANILASVVFAEPKL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCH FDATVLMHPLIPFEPQVQGSLTGRHMLLTAGKRDPICPPNLTTRLEAYLRADGADVTVEW HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE HEGGHEVRPNEIEAARRLFAGVAQGV CCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]