Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is ydjH [C]

Identifier: 13473144

GI number: 13473144

Start: 2941979

End: 2942917

Strand: Direct

Name: ydjH [C]

Synonym: mlr3644

Alternate gene names: 13473144

Gene position: 2941979-2942917 (Clockwise)

Preceding gene: 13473143

Following gene: 13473145

Centisome position: 41.81

GC content: 66.56

Gene sequence:

>939_bases
ATGCGTCCGCTCGCGGTGATCGGCAATGTCAATGTCGACCTGATCGTCGGCCCGGTCGCGCCGTGGCCGAAGGCGGGCAC
GGAAACCGTCGTCGACCATGATGAATTGCGTGTTGGTGGACAGGCCGGCAATACCGGGCTCGCCTGGCAGGCGTTGGGCA
TTGATTTCGAGATCGCCGCCAATGTCGGCGACGATCAGTTCGGCCACTGGCTGCGCGAGGCGTTCGGCAGCCGTGCCGAC
AAATGGCCGGTACGCCCGGAGAGTACGACGCTGTCCGTCGGCATGACCCACCCCGACGGCGAACGGACCTTCTTCACCAC
GCGCGGACACCTGCCCCGCTTCAGCCTTGCCGATGTATTTTCGGTGCTCGATGGCACGCACCTCACCGGCGGCTATGCGT
TGCTGTGCGGCTCCTTCCTTACCGATGATCTCACCCGCGACTACGAGGCGTTCTTCGACTGGGCGGACCGGCACGACATC
GCGGTGGCGCTGGACACCGGTTGGCCGATTGAGGGCTGGACCACGGCGAACTGCAAGGCGGCGCGCACCTGGCTCGCGCG
CTGCGACCTTGCTCTGTTCAACGAGGTGGAGACCGTGACCCTGGCCGGCCTGCCCGATCCGGTCGAGGCGGCGCGGCAAA
TCCAGTCCAGCATGAAGAAGGGCGCGACCGCCGTCGTCAAGCGCGGTCCCGAAGGGGCGATCGCCATCGGCCCCGGCGGA
GCGCTGGTCACGGCGACCGCTCCCGACGTCAAGGTCGTCGATACGATCGGCGCCGGCGATGTTTTCAATGCGGCCTTCCT
GGCCGCACTGGCGCAGGACCAGACGCTGACCGCCTCACTTGCAGCAGCGACGCAGGTGGCGTCGCGCGCCATATCAACCT
TGCCCCGTAACTACGGCGAACCGATGCATCCAAGGGAAGCCACGCATGAGCGCGCTTGA

Upstream 100 bases:

>100_bases
TGCTGCCGGTGGCACAGCGCCTGATGATCGCCTTCGCCGACAGCCGCGTCGACAATGCCGGCACGCCCGTGCGCTCCACC
AAGATCACCAGGAGCGAGTG

Downstream 100 bases:

>100_bases
AATCCGCAACGTCCGCAAGAATTACGGCAGCGTCGAAACGCTGAAAGGCATCGACATCGCGCTGCAGAGCGGCGAATTCC
TTGTGCTGCTCGGCTCGTCG

Product: carbohydrate kinase

Products: NA

Alternate protein names: PfkB Domain Protein; Ribokinase-Like Domain-Containing Protein; Sugar Kinase Protein; Ribokinase; Kinase; PfkB Domain-Containing Protein; ATP-Dependent Phosphofructokinase; Argininosuccinate Lyase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRPLAVIGNVNVDLIVGPVAPWPKAGTETVVDHDELRVGGQAGNTGLAWQALGIDFEIAANVGDDQFGHWLREAFGSRAD
KWPVRPESTTLSVGMTHPDGERTFFTTRGHLPRFSLADVFSVLDGTHLTGGYALLCGSFLTDDLTRDYEAFFDWADRHDI
AVALDTGWPIEGWTTANCKAARTWLARCDLALFNEVETVTLAGLPDPVEAARQIQSSMKKGATAVVKRGPEGAIAIGPGG
ALVTATAPDVKVVDTIGAGDVFNAAFLAALAQDQTLTASLAAATQVASRAISTLPRNYGEPMHPREATHERA

Sequences:

>Translated_312_residues
MRPLAVIGNVNVDLIVGPVAPWPKAGTETVVDHDELRVGGQAGNTGLAWQALGIDFEIAANVGDDQFGHWLREAFGSRAD
KWPVRPESTTLSVGMTHPDGERTFFTTRGHLPRFSLADVFSVLDGTHLTGGYALLCGSFLTDDLTRDYEAFFDWADRHDI
AVALDTGWPIEGWTTANCKAARTWLARCDLALFNEVETVTLAGLPDPVEAARQIQSSMKKGATAVVKRGPEGAIAIGPGG
ALVTATAPDVKVVDTIGAGDVFNAAFLAALAQDQTLTASLAAATQVASRAISTLPRNYGEPMHPREATHERA
>Mature_312_residues
MRPLAVIGNVNVDLIVGPVAPWPKAGTETVVDHDELRVGGQAGNTGLAWQALGIDFEIAANVGDDQFGHWLREAFGSRAD
KWPVRPESTTLSVGMTHPDGERTFFTTRGHLPRFSLADVFSVLDGTHLTGGYALLCGSFLTDDLTRDYEAFFDWADRHDI
AVALDTGWPIEGWTTANCKAARTWLARCDLALFNEVETVTLAGLPDPVEAARQIQSSMKKGATAVVKRGPEGAIAIGPGG
ALVTATAPDVKVVDTIGAGDVFNAAFLAALAQDQTLTASLAAATQVASRAISTLPRNYGEPMHPREATHERA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33201; Mature: 33201

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLAVIGNVNVDLIVGPVAPWPKAGTETVVDHDELRVGGQAGNTGLAWQALGIDFEIAA
CCCEEEEECCCEEEEEECCCCCCCCCCCCEECCHHEEECCCCCCCCCEEEEECCCEEEEE
NVGDDQFGHWLREAFGSRADKWPVRPESTTLSVGMTHPDGERTFFTTRGHLPRFSLADVF
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHH
SVLDGTHLTGGYALLCGSFLTDDLTRDYEAFFDWADRHDIAVALDTGWPIEGWTTANCKA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCCHH
ARTWLARCDLALFNEVETVTLAGLPDPVEAARQIQSSMKKGATAVVKRGPEGAIAIGPGG
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCC
ALVTATAPDVKVVDTIGAGDVFNAAFLAALAQDQTLTASLAAATQVASRAISTLPRNYGE
EEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PMHPREATHERA
CCCCCCCCCCCC
>Mature Secondary Structure
MRPLAVIGNVNVDLIVGPVAPWPKAGTETVVDHDELRVGGQAGNTGLAWQALGIDFEIAA
CCCEEEEECCCEEEEEECCCCCCCCCCCCEECCHHEEECCCCCCCCCEEEEECCCEEEEE
NVGDDQFGHWLREAFGSRADKWPVRPESTTLSVGMTHPDGERTFFTTRGHLPRFSLADVF
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHH
SVLDGTHLTGGYALLCGSFLTDDLTRDYEAFFDWADRHDIAVALDTGWPIEGWTTANCKA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCCHH
ARTWLARCDLALFNEVETVTLAGLPDPVEAARQIQSSMKKGATAVVKRGPEGAIAIGPGG
HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCC
ALVTATAPDVKVVDTIGAGDVFNAAFLAALAQDQTLTASLAAATQVASRAISTLPRNYGE
EEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PMHPREATHERA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA