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The map label for this gene is ycjO [C]

Identifier: 13473141

GI number: 13473141

Start: 2939231

End: 2940115

Strand: Direct

Name: ycjO [C]

Synonym: mlr3640

Alternate gene names: 13473141

Gene position: 2939231-2940115 (Clockwise)

Preceding gene: 13473140

Following gene: 13473142

Centisome position: 41.77

GC content: 64.75

Gene sequence:

>885_bases
ATGTCGAGCACCTGGATGACGACCCGTGCCTGGTTGCTGATGCTGCCGCTGCTCGTGGTCATGGTCGCCGTCATCGGCTG
GCCGCTGGTCGATACGGTCGGTCTTTCCTTCACCGACGCCAAGCTGGTCGGCACCGGCGGCAATTACGTCGGCTTCGACA
ATTACACCAACATGCTGTCGAGCTCGAATTTTTCGCGCACGCTGGTCACCACGACGCTGTTCGCGGTGATTTCGGTTGCT
GCAGAAATGGTGATCGGCGTTCTCGCCGCCTTGCTCCTCAATCAGCAGTTCCACGGCCGCGCCATCCTGCGCGCCCTGAT
GATCCTGCCCTGGGCATTGCCGACCGTGGTCAACGCCACGCTGTGGCGGCTGATCTACAATCCCGAATATGGCGCGCTGA
ACGCCGCCCTGACGCAACTCAATCTCATCGACGCCTACCGCTCCTGGCTGGGTGAGCCGGGAACGGCGCTTACGGCGCTG
ATCGTCGCCGACTGCTGGAAGAACTTTCCACTGGTGGCGCTGATCGCACTCGCCGCTTTGCAGGCGGTGCCACGCGACAT
CACCGCCGCCTCGCTCGTCGATGGCGCGGGACCGTTCAACCGCTTCCGCTTCGTCATCCTGCCCTATCTCGCCGGCCCGC
TGATGGTGGCGCTGGTGCTGCGCACCATCGAGGCCTTCAAGGTCTTCGACATCATCTGGGTGATGACCCGCGGCGGCCCG
GCCAACAGCACGCGCACGCTGTCGATCCTCGTCTACCAGGAGGCCTTCTCCTTCCAGCGCGCCGGCTCCGGCGCGTCGCT
GGCGCTGATCGTCACCTTGCTCGTCACCGTGCTCGCCGTCGCCTATGCGGCTCTGGTCAGGAAGACCGCCGGGAGTGCCG
CCTGA

Upstream 100 bases:

>100_bases
GCATGATCCTTTCCGGAAGTCGGTTCCGACTTCCGGGGTCATGCGCGAGTGCCGCCCGTGCTATGTCTGAAATCACCGTG
AATCAAGAGAGGCTGCTCCG

Downstream 100 bases:

>100_bases
TGGAACGCAGAAGCCCCGCCTTCACCCTCTTCATCCATGCCTGCGCGCTGCTGCTCGCCGCCATTATCCTGGCGCCGATC
GCCTGGCTGTTCATCATGAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSSTWMTTRAWLLMLPLLVVMVAVIGWPLVDTVGLSFTDAKLVGTGGNYVGFDNYTNMLSSSNFSRTLVTTTLFAVISVA
AEMVIGVLAALLLNQQFHGRAILRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLNLIDAYRSWLGEPGTALTAL
IVADCWKNFPLVALIALAALQAVPRDITAASLVDGAGPFNRFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALVRKTAGSAA

Sequences:

>Translated_294_residues
MSSTWMTTRAWLLMLPLLVVMVAVIGWPLVDTVGLSFTDAKLVGTGGNYVGFDNYTNMLSSSNFSRTLVTTTLFAVISVA
AEMVIGVLAALLLNQQFHGRAILRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLNLIDAYRSWLGEPGTALTAL
IVADCWKNFPLVALIALAALQAVPRDITAASLVDGAGPFNRFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALVRKTAGSAA
>Mature_293_residues
SSTWMTTRAWLLMLPLLVVMVAVIGWPLVDTVGLSFTDAKLVGTGGNYVGFDNYTNMLSSSNFSRTLVTTTLFAVISVAA
EMVIGVLAALLLNQQFHGRAILRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLNLIDAYRSWLGEPGTALTALI
VADCWKNFPLVALIALAALQAVPRDITAASLVDGAGPFNRFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGPA
NSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALVRKTAGSAA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=258, Percent_Identity=28.6821705426357, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789861, Length=273, Percent_Identity=29.3040293040293, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1790465, Length=246, Percent_Identity=30.8943089430894, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31596; Mature: 31465

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTWMTTRAWLLMLPLLVVMVAVIGWPLVDTVGLSFTDAKLVGTGGNYVGFDNYTNMLS
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEECCEEEECCCCCCCCCHHHHHHH
SSNFSRTLVTTTLFAVISVAAEMVIGVLAALLLNQQFHGRAILRALMILPWALPTVVNAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LWRLIYNPEYGALNAALTQLNLIDAYRSWLGEPGTALTALIVADCWKNFPLVALIALAAL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
QAVPRDITAASLVDGAGPFNRFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALVRKTAGSAA
CCCCEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTWMTTRAWLLMLPLLVVMVAVIGWPLVDTVGLSFTDAKLVGTGGNYVGFDNYTNMLS
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEECCEEEECCCCCCCCCHHHHHHH
SSNFSRTLVTTTLFAVISVAAEMVIGVLAALLLNQQFHGRAILRALMILPWALPTVVNAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LWRLIYNPEYGALNAALTQLNLIDAYRSWLGEPGTALTALIVADCWKNFPLVALIALAAL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
QAVPRDITAASLVDGAGPFNRFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTVLAVAYAALVRKTAGSAA
CCCCEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA