| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473136
Identifier: 13473136
GI number: 13473136
Start: 2932210
End: 2933295
Strand: Direct
Name: 13473136
Synonym: mlr3635
Alternate gene names: NA
Gene position: 2932210-2933295 (Clockwise)
Preceding gene: 13473135
Following gene: 13473137
Centisome position: 41.67
GC content: 62.62
Gene sequence:
>1086_bases TTGGTGTTCCAGGGCGGCGGCGCGCTTGGCGCCTACCAGGCCGGCGTCTACCAGGCGCTGGCCGATGCCGGCTGCGAGCC GAGCTGGCTGTCCGGCGTGTCGATCGGCGCCATCAATGCCTCGATCATCGCCGGCAATGAACCCAGCCGCCGCCTGCAGC GGCTCGAACAGTTCTGGCAGACCATTTCAGGCCGCAAGATCTGGAGCTACACGCCGGAAGGCGACATCTACCGAGACATC CGCAACCGTACCTCGTCCTGGATGACGATGACCATGGGCCAGCCCGGCTTCTTCAAGCCACGCAACCCCAACCCATGGTT CGAGCCGCAAGGCGCCGAGGGTGCGACCAGCTTCTACGACACCGCCGAGCTGAAAGACACGCTGGAGAGCCTGATCGACT TCGATGTGCTTAACGACGGCAAGAAGCGGCTGAGTGTCGGCGCGGTCAATGTCCGGACCGGCAACTTCGTCTATTTCGAC ACGGAAAAGGTGCGCATCGGACCCGAGCACATCATGGCCAGCGGCGCGTTGCCACCGGCCTTTCCGTCGGTCCGCATCGA AGGCGAATATTATTGGGACGGCGGCATCGTCTCCAATACGCCGCTGCAATATTTGCTCGACCAGGAAGAGGACCGTTCGT CGCTGGTGTTCCAGGTCGACCTGTTCAGTGCCCGCGGCGTGCTGCCGCGCAGCATGCCGGACGTGCTGTCGCGCCACAAG GACATCATGTATTCCAGCCGCACGCGCCAGAATACAGACAATTTCAAGCGCATCCATGGCCTGAAGATGCGCCTGCTCGA TGCGCTGAAGCGCGTACCCAAGGAGCAGCTGACACCGGCGGAAGAAGCGCTGATCGCGGACTATTCGGACGCCGGCCTGG TCAACATCGTGCACCTGATCTACCAGCACAAGGGCTATGAAGGTCACGCCAAGGACTACGAGTTCTCCGGCACCTCGATG CGCGAGCATTGGGAGACCGGCCTGGAAGACACGCAGCGCACCTTGCGCCATCGCAAATGGCTGACCATGCCGGCCAATGC CGACGGCGTTACCATCCACGATCTGCACCGCGAAGACCCGACCTGA
Upstream 100 bases:
>100_bases AGCACGACCCAGCCGGAGAAAATTCGTGCTTGAACGTCACCGAAGCAAGGAAGCCGCCGCCACGATCGCGGAGATATCGG CGCAGTATGACCGCATCGCT
Downstream 100 bases:
>100_bases CATTTGCGTCCAGGACAAGCGGAGCAATCTTACAAAGCGGACTTCGCCCGCGAACGGAATCCTTCGCTGGTTGGTCAACC GACGCCGCGCATCGTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Esterase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Transmembrane Protein; Transmembrane Patatin-Like Phospholipase; Patatin-Like Phospholipase Domain-Containing Protein; Alpha/Beta Hydrolase; Patatin-Like Phospholipase Family; Serine Protease; Alpha-Beta Hydrolase Family Esterase; Patatin Family Phospholipase; Dehydrogenase/Reductase; Phospholipase Patatin Family; Phospholipase Patatin Family Protein; Transpatatin- Like Phospholipase Domain-Containing Protein
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MVFQGGGALGAYQAGVYQALADAGCEPSWLSGVSIGAINASIIAGNEPSRRLQRLEQFWQTISGRKIWSYTPEGDIYRDI RNRTSSWMTMTMGQPGFFKPRNPNPWFEPQGAEGATSFYDTAELKDTLESLIDFDVLNDGKKRLSVGAVNVRTGNFVYFD TEKVRIGPEHIMASGALPPAFPSVRIEGEYYWDGGIVSNTPLQYLLDQEEDRSSLVFQVDLFSARGVLPRSMPDVLSRHK DIMYSSRTRQNTDNFKRIHGLKMRLLDALKRVPKEQLTPAEEALIADYSDAGLVNIVHLIYQHKGYEGHAKDYEFSGTSM REHWETGLEDTQRTLRHRKWLTMPANADGVTIHDLHREDPT
Sequences:
>Translated_361_residues MVFQGGGALGAYQAGVYQALADAGCEPSWLSGVSIGAINASIIAGNEPSRRLQRLEQFWQTISGRKIWSYTPEGDIYRDI RNRTSSWMTMTMGQPGFFKPRNPNPWFEPQGAEGATSFYDTAELKDTLESLIDFDVLNDGKKRLSVGAVNVRTGNFVYFD TEKVRIGPEHIMASGALPPAFPSVRIEGEYYWDGGIVSNTPLQYLLDQEEDRSSLVFQVDLFSARGVLPRSMPDVLSRHK DIMYSSRTRQNTDNFKRIHGLKMRLLDALKRVPKEQLTPAEEALIADYSDAGLVNIVHLIYQHKGYEGHAKDYEFSGTSM REHWETGLEDTQRTLRHRKWLTMPANADGVTIHDLHREDPT >Mature_361_residues MVFQGGGALGAYQAGVYQALADAGCEPSWLSGVSIGAINASIIAGNEPSRRLQRLEQFWQTISGRKIWSYTPEGDIYRDI RNRTSSWMTMTMGQPGFFKPRNPNPWFEPQGAEGATSFYDTAELKDTLESLIDFDVLNDGKKRLSVGAVNVRTGNFVYFD TEKVRIGPEHIMASGALPPAFPSVRIEGEYYWDGGIVSNTPLQYLLDQEEDRSSLVFQVDLFSARGVLPRSMPDVLSRHK DIMYSSRTRQNTDNFKRIHGLKMRLLDALKRVPKEQLTPAEEALIADYSDAGLVNIVHLIYQHKGYEGHAKDYEFSGTSM REHWETGLEDTQRTLRHRKWLTMPANADGVTIHDLHREDPT
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40751; Mature: 40751
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFQGGGALGAYQAGVYQALADAGCEPSWLSGVSIGAINASIIAGNEPSRRLQRLEQFWQ CEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEECEEEEEEECCCHHHHHHHHHHHHH TISGRKIWSYTPEGDIYRDIRNRTSSWMTMTMGQPGFFKPRNPNPWFEPQGAEGATSFYD HHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH TAELKDTLESLIDFDVLNDGKKRLSVGAVNVRTGNFVYFDTEKVRIGPEHIMASGALPPA HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCEEEECHHHHHCCCCCCCC FPSVRIEGEYYWDGGIVSNTPLQYLLDQEEDRSSLVFQVDLFSARGVLPRSMPDVLSRHK CCCEEEEEEEEECCCEECCCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH DIMYSSRTRQNTDNFKRIHGLKMRLLDALKRVPKEQLTPAEEALIADYSDAGLVNIVHLI HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHEECCCCCHHHHHHHHH YQHKGYEGHAKDYEFSGTSMREHWETGLEDTQRTLRHRKWLTMPANADGVTIHDLHREDP HHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCC T C >Mature Secondary Structure MVFQGGGALGAYQAGVYQALADAGCEPSWLSGVSIGAINASIIAGNEPSRRLQRLEQFWQ CEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEECEEEEEEECCCHHHHHHHHHHHHH TISGRKIWSYTPEGDIYRDIRNRTSSWMTMTMGQPGFFKPRNPNPWFEPQGAEGATSFYD HHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH TAELKDTLESLIDFDVLNDGKKRLSVGAVNVRTGNFVYFDTEKVRIGPEHIMASGALPPA HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCEEEECHHHHHCCCCCCCC FPSVRIEGEYYWDGGIVSNTPLQYLLDQEEDRSSLVFQVDLFSARGVLPRSMPDVLSRHK CCCEEEEEEEEECCCEECCCCHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHH DIMYSSRTRQNTDNFKRIHGLKMRLLDALKRVPKEQLTPAEEALIADYSDAGLVNIVHLI HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHEECCCCCHHHHHHHHH YQHKGYEGHAKDYEFSGTSMREHWETGLEDTQRTLRHRKWLTMPANADGVTIHDLHREDP HHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA