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The map label for this gene is potC [C]

Identifier: 13473127

GI number: 13473127

Start: 2921439

End: 2923142

Strand: Reverse

Name: potC [C]

Synonym: mll3625

Alternate gene names: 13473127

Gene position: 2923142-2921439 (Counterclockwise)

Preceding gene: 13473128

Following gene: 13473126

Centisome position: 41.55

GC content: 65.79

Gene sequence:

>1704_bases
ATGTCGACACGCATCAGGGAAAGCCGGGGCCAGGAAATGGTCCTGACGGCGGCGGTGGCCGTCGTCATCGTGCTGCTTTC
GCTGCTGCCCATGCTGCGCCTCATCAAGGAGATCATCGCACCTGGCGGCACGCTGTCGACCGTGGCCGTGGAGGCGGGCT
TGAGAAGCCCGGCGACCTGGGTCGCGACATGGCATACGCTGGTCGTCGGCATCGGTGGCACCTTGCTTGCGGTGCTGTCG
GGCACGCTGGTGGCGGTGCTGGTTTCGCTGACCGACATACGCGGCCGCAGCGCCCTGGTGCTGTGCTACGTCATGCCGCT
GATGATCGCGCCGCAGGTGACGGCGCTGGCCTGGCTGCAGCTGTTCGGCCCGGCAAGCCCATTCCTCAAGCTGTTCGGCG
CGGCACCGCCGCTCGGCACGAAAAACCCGCTTTACTCGACCTCGGGCATCATCCTGCTGCTTGGCGTGCAATATGGCCCG
CTGGTTTTCCTGCTGGTGCGGGCCGGCCTGCGCAAGCTGCCGCGCGAACTGGTCGAGGCCGCACGCGCCGGCGGCGCCGG
CTGGTCCACCGTGCTCGCCACCATCGTGCTGCCGCTGATGACGCCGTCGATCATGGCGGCCGCGGCATTGGCCTTCGTGT
CCTGCGTCGGCAATTTCGGCATTCCCGCCTTCCTCGGCATTCCCGCCAATTATCTGGTGCTGCCGACGCTCATCTATCAG
AAGCTGGCCGGCGGTGGTCCGGCCGTGCTCGGCGAGGCCGCGTTCCTTTCGGTGCTGATCGGCGTGATCGCGATGGCCGG
CATTATCGCCCAGGAGGTGATGAGCCGCCGCCGCGACTACCGCATCTCTTCGACATCGCTGCCGGCCGAACCTTACGAAC
TCGGCGGCTGGCGGCCCGTTGTTCAGGTCGGCATGTGGCTGCTGATCGTGCTGGTGCTGTTCCTGCCGCTGTTCGGGCTG
GTGCTGACCTCATTGGTGCCGGGCTATGGCATCGCGCTCACCGCCAAGACGATGACGCTCGACAATTATCGTTTCGTGCT
GTTCGAGCATGATGCCGCCAATCGCGCCTTCTTCAACAGTTTCTGGCTGTCGATCGCGGCCGCCTTCTTCGCGGTCGTCG
TCGCCGTGCCGGTCGGCTATCTCATCGCCTGGGGCAAGCAGCGCTGGGTGCGGCTGCTCAATCTGGCGGTCGAACTGCCC
TATGCCTTGCCCGGCGTGGTGCTGGCGATCGCCTCGCTGCTGCTCTTCCTCAGGCCGATCCCACTGACCGGCATCCAACT
CTACAACACGGTCTGGATCATCCTCTACGCCTACCTCGCCCGCTTCCTGGTGCTGGCGCTGCGGCCGACCATCAGCGGCT
ACCAACAGATCGACCGGGCGCTGGAGGAGGCCGCGCAGACGGCGGGCGCCGGGCTGTTCACGCGCATGCGCACCATCATC
TTTCCACTGGTCGCGCCGGCGGCGATCGCCGGCGGTCTTTTGATCTTCATGACGGCACTCAGCGAACTCACCGTCTCGGC
GCTGCTGTGGTCGTCAGGCTCGGAGACGATCGGCGTGGTGATGTTTTCCTTCGAACAGGGCGGCGATTCCAACTACGCGG
CGGCAATGTCGGTCGTCACGGTCGCGGTCACCTTCGTGCTGATGCTGGTGACCAATCTGCTTGCCCCCTACCTTCCCAAC
GGAGTGCTGCCATGGCGCGACTGA

Upstream 100 bases:

>100_bases
AGGCGAAGTTCCAGGAACTGTTCGGCGGCTGAGCCGGCAATCGCGGCGGGATGCCGTTTCCGGCGGCGTCCCGCCCGCAC
CGATCCCAGGAAGCGCAATT

Downstream 100 bases:

>100_bases
GCCTGGACCATGTGACCAAGAGCTTCGCCAACTTCGACGCCGTGAAGGACGTCTCGATCGACGTCGCCGACGGCGAGTTC
CTGGCCGTGCTCGGGCCGTC

Product: ABC transport system permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSTRIRESRGQEMVLTAAVAVVIVLLSLLPMLRLIKEIIAPGGTLSTVAVEAGLRSPATWVATWHTLVVGIGGTLLAVLS
GTLVAVLVSLTDIRGRSALVLCYVMPLMIAPQVTALAWLQLFGPASPFLKLFGAAPPLGTKNPLYSTSGIILLLGVQYGP
LVFLLVRAGLRKLPRELVEAARAGGAGWSTVLATIVLPLMTPSIMAAAALAFVSCVGNFGIPAFLGIPANYLVLPTLIYQ
KLAGGGPAVLGEAAFLSVLIGVIAMAGIIAQEVMSRRRDYRISSTSLPAEPYELGGWRPVVQVGMWLLIVLVLFLPLFGL
VLTSLVPGYGIALTAKTMTLDNYRFVLFEHDAANRAFFNSFWLSIAAAFFAVVVAVPVGYLIAWGKQRWVRLLNLAVELP
YALPGVVLAIASLLLFLRPIPLTGIQLYNTVWIILYAYLARFLVLALRPTISGYQQIDRALEEAAQTAGAGLFTRMRTII
FPLVAPAAIAGGLLIFMTALSELTVSALLWSSGSETIGVVMFSFEQGGDSNYAAAMSVVTVAVTFVLMLVTNLLAPYLPN
GVLPWRD

Sequences:

>Translated_567_residues
MSTRIRESRGQEMVLTAAVAVVIVLLSLLPMLRLIKEIIAPGGTLSTVAVEAGLRSPATWVATWHTLVVGIGGTLLAVLS
GTLVAVLVSLTDIRGRSALVLCYVMPLMIAPQVTALAWLQLFGPASPFLKLFGAAPPLGTKNPLYSTSGIILLLGVQYGP
LVFLLVRAGLRKLPRELVEAARAGGAGWSTVLATIVLPLMTPSIMAAAALAFVSCVGNFGIPAFLGIPANYLVLPTLIYQ
KLAGGGPAVLGEAAFLSVLIGVIAMAGIIAQEVMSRRRDYRISSTSLPAEPYELGGWRPVVQVGMWLLIVLVLFLPLFGL
VLTSLVPGYGIALTAKTMTLDNYRFVLFEHDAANRAFFNSFWLSIAAAFFAVVVAVPVGYLIAWGKQRWVRLLNLAVELP
YALPGVVLAIASLLLFLRPIPLTGIQLYNTVWIILYAYLARFLVLALRPTISGYQQIDRALEEAAQTAGAGLFTRMRTII
FPLVAPAAIAGGLLIFMTALSELTVSALLWSSGSETIGVVMFSFEQGGDSNYAAAMSVVTVAVTFVLMLVTNLLAPYLPN
GVLPWRD
>Mature_566_residues
STRIRESRGQEMVLTAAVAVVIVLLSLLPMLRLIKEIIAPGGTLSTVAVEAGLRSPATWVATWHTLVVGIGGTLLAVLSG
TLVAVLVSLTDIRGRSALVLCYVMPLMIAPQVTALAWLQLFGPASPFLKLFGAAPPLGTKNPLYSTSGIILLLGVQYGPL
VFLLVRAGLRKLPRELVEAARAGGAGWSTVLATIVLPLMTPSIMAAAALAFVSCVGNFGIPAFLGIPANYLVLPTLIYQK
LAGGGPAVLGEAAFLSVLIGVIAMAGIIAQEVMSRRRDYRISSTSLPAEPYELGGWRPVVQVGMWLLIVLVLFLPLFGLV
LTSLVPGYGIALTAKTMTLDNYRFVLFEHDAANRAFFNSFWLSIAAAFFAVVVAVPVGYLIAWGKQRWVRLLNLAVELPY
ALPGVVLAIASLLLFLRPIPLTGIQLYNTVWIILYAYLARFLVLALRPTISGYQQIDRALEEAAQTAGAGLFTRMRTIIF
PLVAPAAIAGGLLIFMTALSELTVSALLWSSGSETIGVVMFSFEQGGDSNYAAAMSVVTVAVTFVLMLVTNLLAPYLPNG
VLPWRD

Specific function: Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60476; Mature: 60345

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRIRESRGQEMVLTAAVAVVIVLLSLLPMLRLIKEIIAPGGTLSTVAVEAGLRSPATW
CCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHH
VATWHTLVVGIGGTLLAVLSGTLVAVLVSLTDIRGRSALVLCYVMPLMIAPQVTALAWLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
LFGPASPFLKLFGAAPPLGTKNPLYSTSGIILLLGVQYGPLVFLLVRAGLRKLPRELVEA
HHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
ARAGGAGWSTVLATIVLPLMTPSIMAAAALAFVSCVGNFGIPAFLGIPANYLVLPTLIYQ
HHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHH
KLAGGGPAVLGEAAFLSVLIGVIAMAGIIAQEVMSRRRDYRISSTSLPAEPYELGGWRPV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
VQVGMWLLIVLVLFLPLFGLVLTSLVPGYGIALTAKTMTLDNYRFVLFEHDAANRAFFNS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCHHHHHH
FWLSIAAAFFAVVVAVPVGYLIAWGKQRWVRLLNLAVELPYALPGVVLAIASLLLFLRPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PLTGIQLYNTVWIILYAYLARFLVLALRPTISGYQQIDRALEEAAQTAGAGLFTRMRTII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
FPLVAPAAIAGGLLIFMTALSELTVSALLWSSGSETIGVVMFSFEQGGDSNYAAAMSVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHH
VAVTFVLMLVTNLLAPYLPNGVLPWRD
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
STRIRESRGQEMVLTAAVAVVIVLLSLLPMLRLIKEIIAPGGTLSTVAVEAGLRSPATW
CCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHH
VATWHTLVVGIGGTLLAVLSGTLVAVLVSLTDIRGRSALVLCYVMPLMIAPQVTALAWLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
LFGPASPFLKLFGAAPPLGTKNPLYSTSGIILLLGVQYGPLVFLLVRAGLRKLPRELVEA
HHCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
ARAGGAGWSTVLATIVLPLMTPSIMAAAALAFVSCVGNFGIPAFLGIPANYLVLPTLIYQ
HHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHH
KLAGGGPAVLGEAAFLSVLIGVIAMAGIIAQEVMSRRRDYRISSTSLPAEPYELGGWRPV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
VQVGMWLLIVLVLFLPLFGLVLTSLVPGYGIALTAKTMTLDNYRFVLFEHDAANRAFFNS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCCCHHHHHH
FWLSIAAAFFAVVVAVPVGYLIAWGKQRWVRLLNLAVELPYALPGVVLAIASLLLFLRPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PLTGIQLYNTVWIILYAYLARFLVLALRPTISGYQQIDRALEEAAQTAGAGLFTRMRTII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
FPLVAPAAIAGGLLIFMTALSELTVSALLWSSGSETIGVVMFSFEQGGDSNYAAAMSVVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHH
VAVTFVLMLVTNLLAPYLPNGVLPWRD
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]