| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473125
Identifier: 13473125
GI number: 13473125
Start: 2918957
End: 2920177
Strand: Reverse
Name: 13473125
Synonym: mll3623
Alternate gene names: NA
Gene position: 2920177-2918957 (Counterclockwise)
Preceding gene: 13473126
Following gene: 13473122
Centisome position: 41.5
GC content: 59.71
Gene sequence:
>1221_bases ATGAACGGCAAGATACGAGAGTGGTTTCGCAATTGGCGATGGGCCTTGGCCGCATCGCTGATCCTGCATGCCTTGATCGC AGCGTTCTTGTTCTTTGGCGTGCCGAGATCCGAGCAGCAGCCGGATCAGCAGGAACAGCCCGTCAATGTCGCGATTGTGC CGCCACCCGAGAAGCCTAAGCCGAAACCTGCTCCAAAGCCACCGGAGCCGACACCTGAAAAGAAGGCTGAAAAGCCGCCT GAACAAAAGCCGCCTCCGGAGCCCCCGAAACCGCCAGACGACCATGTTCTGAAGCGCGTTTTCCAGTACGGCCAGAAGGA TACGGGGCCGGAGAAATCGCTCGACGGAAACAGCGCTAAACCCAACACGCCGTCACCGGCCAAGGATGAGGCGGTGAAGC CGCCTATAACACCGACACCCGTGCCGACCCGGCCCGCCCCGGTTGCAACGCCACAGCAGAAGGCAGAGCCCAGCAAGCCT GACGAGAAGCCGGCCACTATTGCGCCGGATGGAAAGCCCGCGCAAGGCGAGGAAAAGCAGGAGGCCGCCGCGCCGGACGC CAAACCTGCGCAAAACGAGGAGAAGCAGGCGACCGAGGACGCTGACAAACAGCAGGCGGACAAACGGGAGCTCGCACCGC AACCCGCCGAAAAGCAAGCGGTTGTGACGCCAAAGCCCTTGGCGGCTGAGACTGGTGATAAGCCAGCGCCGCCACCCTCT GCCGAAAAGGCAAAGCCAAAACCTGCAAAGACGATGAATTTCAAATCCGCAAAAGCCTTTAAGGCCCCAAGCGGGAATGC CAGAAGGCCAAGTCCCACGAACGACGCCGCAGCCGCGGGATCGCCGATCTATTCGGGCCTTCCCGGTGTGCGAAAGCTCT ATTCGCAAGGCGCAACCGGCAATGCCTTCGCCACAAGCTCCATGGAGAATGTGCCGCGGGGTCAGCGCGTGGCCACCCTT TGCGGCAATGTTCTGAGCGAGAAACTGCAAAGTGCCGACTATTCGGTCAAATGGGTGCCAACCATTACGCTGGACAAAGG CAATGTTCTCAACCCAGCTCAAGCGGCCTTCAGCACCAGAAACACTTGGTACAATCTAAACTTCCGATGTGAAGTCGACC CCGATGCGACGAGGGTCCTATCCTTCAACTTCCGTGTGGGGTCACTAGTCCCGCCTGGCGAATGGGCCAGCCGTGGTTTC ACCAAGTATCCGCTAAATTAG
Upstream 100 bases:
>100_bases CGTGTTTGACCATCCCGATCACCAAGCTGTCAGCGGCTAAACCGCGCCAATCCCGTGCCTGTGCTTGAAGCCGCCGCTAT TTCATTCCACATCGGGCGTA
Downstream 100 bases:
>100_bases GCTGGCACGCAAAGCAGAATTGCCGGCTAATTTCTTCCCAATTGGCGCAGACGAAACGCCGTCAGTCACGCGGCGTGCTC GGCATAGGTGTGGCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNGKIREWFRNWRWALAASLILHALIAAFLFFGVPRSEQQPDQQEQPVNVAIVPPPEKPKPKPAPKPPEPTPEKKAEKPP EQKPPPEPPKPPDDHVLKRVFQYGQKDTGPEKSLDGNSAKPNTPSPAKDEAVKPPITPTPVPTRPAPVATPQQKAEPSKP DEKPATIAPDGKPAQGEEKQEAAAPDAKPAQNEEKQATEDADKQQADKRELAPQPAEKQAVVTPKPLAAETGDKPAPPPS AEKAKPKPAKTMNFKSAKAFKAPSGNARRPSPTNDAAAAGSPIYSGLPGVRKLYSQGATGNAFATSSMENVPRGQRVATL CGNVLSEKLQSADYSVKWVPTITLDKGNVLNPAQAAFSTRNTWYNLNFRCEVDPDATRVLSFNFRVGSLVPPGEWASRGF TKYPLN
Sequences:
>Translated_406_residues MNGKIREWFRNWRWALAASLILHALIAAFLFFGVPRSEQQPDQQEQPVNVAIVPPPEKPKPKPAPKPPEPTPEKKAEKPP EQKPPPEPPKPPDDHVLKRVFQYGQKDTGPEKSLDGNSAKPNTPSPAKDEAVKPPITPTPVPTRPAPVATPQQKAEPSKP DEKPATIAPDGKPAQGEEKQEAAAPDAKPAQNEEKQATEDADKQQADKRELAPQPAEKQAVVTPKPLAAETGDKPAPPPS AEKAKPKPAKTMNFKSAKAFKAPSGNARRPSPTNDAAAAGSPIYSGLPGVRKLYSQGATGNAFATSSMENVPRGQRVATL CGNVLSEKLQSADYSVKWVPTITLDKGNVLNPAQAAFSTRNTWYNLNFRCEVDPDATRVLSFNFRVGSLVPPGEWASRGF TKYPLN >Mature_406_residues MNGKIREWFRNWRWALAASLILHALIAAFLFFGVPRSEQQPDQQEQPVNVAIVPPPEKPKPKPAPKPPEPTPEKKAEKPP EQKPPPEPPKPPDDHVLKRVFQYGQKDTGPEKSLDGNSAKPNTPSPAKDEAVKPPITPTPVPTRPAPVATPQQKAEPSKP DEKPATIAPDGKPAQGEEKQEAAAPDAKPAQNEEKQATEDADKQQADKRELAPQPAEKQAVVTPKPLAAETGDKPAPPPS AEKAKPKPAKTMNFKSAKAFKAPSGNARRPSPTNDAAAAGSPIYSGLPGVRKLYSQGATGNAFATSSMENVPRGQRVATL CGNVLSEKLQSADYSVKWVPTITLDKGNVLNPAQAAFSTRNTWYNLNFRCEVDPDATRVLSFNFRVGSLVPPGEWASRGF TKYPLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43842; Mature: 43842
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKIREWFRNWRWALAASLILHALIAAFLFFGVPRSEQQPDQQEQPVNVAIVPPPEKPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEECCCCCCC PKPAPKPPEPTPEKKAEKPPEQKPPPEPPKPPDDHVLKRVFQYGQKDTGPEKSLDGNSAK CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC PNTPSPAKDEAVKPPITPTPVPTRPAPVATPQQKAEPSKPDEKPATIAPDGKPAQGEEKQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCHHH EAAAPDAKPAQNEEKQATEDADKQQADKRELAPQPAEKQAVVTPKPLAAETGDKPAPPPS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCC AEKAKPKPAKTMNFKSAKAFKAPSGNARRPSPTNDAAAAGSPIYSGLPGVRKLYSQGATG CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHCCCCC NAFATSSMENVPRGQRVATLCGNVLSEKLQSADYSVKWVPTITLDKGNVLNPAQAAFSTR CEEECCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHCC NTWYNLNFRCEVDPDATRVLSFNFRVGSLVPPGEWASRGFTKYPLN CCEEEEEEEEECCCCCEEEEEEECEECCCCCCCHHHHCCCEECCCC >Mature Secondary Structure MNGKIREWFRNWRWALAASLILHALIAAFLFFGVPRSEQQPDQQEQPVNVAIVPPPEKPK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEEECCCCCCC PKPAPKPPEPTPEKKAEKPPEQKPPPEPPKPPDDHVLKRVFQYGQKDTGPEKSLDGNSAK CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC PNTPSPAKDEAVKPPITPTPVPTRPAPVATPQQKAEPSKPDEKPATIAPDGKPAQGEEKQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCCHHH EAAAPDAKPAQNEEKQATEDADKQQADKRELAPQPAEKQAVVTPKPLAAETGDKPAPPPS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCC AEKAKPKPAKTMNFKSAKAFKAPSGNARRPSPTNDAAAAGSPIYSGLPGVRKLYSQGATG CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHCCCCC NAFATSSMENVPRGQRVATLCGNVLSEKLQSADYSVKWVPTITLDKGNVLNPAQAAFSTR CEEECCHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHCC NTWYNLNFRCEVDPDATRVLSFNFRVGSLVPPGEWASRGFTKYPLN CCEEEEEEEEECCCCCEEEEEEECEECCCCCCCHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA