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The map label for this gene is 13473068

Identifier: 13473068

GI number: 13473068

Start: 2865435

End: 2866115

Strand: Direct

Name: 13473068

Synonym: mlr3555

Alternate gene names: NA

Gene position: 2865435-2866115 (Clockwise)

Preceding gene: 13473067

Following gene: 13473070

Centisome position: 40.72

GC content: 67.4

Gene sequence:

>681_bases
ATGATCCCCTGGGTCCATCTCGATTCGGCAAAGACCGGGGATGGAGCCCAGGAACTTCGCCTCAAGCGGCGCGGCAGCGA
GTTCTCGATCATGCTCGGCACCAACGAGCTGATGAACAGCCGCCTCAGCGGCTCCGAGCAAGCGCTGGCCAAACTGTCCT
GCCAAAGGATTGCGGGCCATCGCCAGCCGAGGATTCTGATCGGCGGCCTCGGCATGGGTTTTACATTGCGCGCCGCCCTG
GCCGAACTCGGCAAGGATGCCGGCATCGTCGTCGCGGAACTGGTGCCGGCGGTCGTCGTCTGGGCACGCGGCCCGATGGC
GGAGGTGTTCGGCGGCTGTCTCGACGACCCCCGCGTCGCCATCCAGGAGACCGATGTCGGGCAATTGATCCGATCCGGGT
CTGCGGCCTGGGACGCCATCCTGCTCGACGTCGACAACGGCCCCGAAGGCATCGTCCACAAGGGCAATGACGCCCTCTAC
AGCCTCGCAGGCCTCGGCGCCGCACGCACCGCCCTCAAGCCGGGTGGCGTGCTGGCGGTGTGGTCGCAAGGACCGGACAG
CGGCTTCACGCGGCGGCTGAAGCAGGCAGGCTTTGCCGTCGAGGAGGTCAACACGCGCGCCAACGGCAAGCGCGGCGCGC
GTCATGTCATCTGGATCGCCACCGCCGCGGGCAGGTTTTAG

Upstream 100 bases:

>100_bases
GGCGATCTCTCGGTGAAGCTGATCATCGCGGTGGTCGCGCTCATCCCCTACCGGCTGCTCGCCGCCCGCTGGAGCCAGCC
GGCGCTGGCCGTCTAAAACC

Downstream 100 bases:

>100_bases
AGCCTCGATATTAGCCCTTCAAGGACAGCAGAAACGACTCTGTCGCTGCGTCGGCTTCCCCGGCATAGCGGGCGTCATAG
CCCAGCCAGCCGTCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIPWVHLDSAKTGDGAQELRLKRRGSEFSIMLGTNELMNSRLSGSEQALAKLSCQRIAGHRQPRILIGGLGMGFTLRAAL
AELGKDAGIVVAELVPAVVVWARGPMAEVFGGCLDDPRVAIQETDVGQLIRSGSAAWDAILLDVDNGPEGIVHKGNDALY
SLAGLGAARTALKPGGVLAVWSQGPDSGFTRRLKQAGFAVEEVNTRANGKRGARHVIWIATAAGRF

Sequences:

>Translated_226_residues
MIPWVHLDSAKTGDGAQELRLKRRGSEFSIMLGTNELMNSRLSGSEQALAKLSCQRIAGHRQPRILIGGLGMGFTLRAAL
AELGKDAGIVVAELVPAVVVWARGPMAEVFGGCLDDPRVAIQETDVGQLIRSGSAAWDAILLDVDNGPEGIVHKGNDALY
SLAGLGAARTALKPGGVLAVWSQGPDSGFTRRLKQAGFAVEEVNTRANGKRGARHVIWIATAAGRF
>Mature_226_residues
MIPWVHLDSAKTGDGAQELRLKRRGSEFSIMLGTNELMNSRLSGSEQALAKLSCQRIAGHRQPRILIGGLGMGFTLRAAL
AELGKDAGIVVAELVPAVVVWARGPMAEVFGGCLDDPRVAIQETDVGQLIRSGSAAWDAILLDVDNGPEGIVHKGNDALY
SLAGLGAARTALKPGGVLAVWSQGPDSGFTRRLKQAGFAVEEVNTRANGKRGARHVIWIATAAGRF

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23873; Mature: 23873

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPWVHLDSAKTGDGAQELRLKRRGSEFSIMLGTNELMNSRLSGSEQALAKLSCQRIAGH
CCCEEECCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCC
RQPRILIGGLGMGFTLRAALAELGKDAGIVVAELVPAVVVWARGPMAEVFGGCLDDPRVA
CCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEE
IQETDVGQLIRSGSAAWDAILLDVDNGPEGIVHKGNDALYSLAGLGAARTALKPGGVLAV
EEECCHHHHHHCCCCCEEEEEEECCCCCCCCEECCCHHHHHHHCCCHHHHHCCCCCEEEE
WSQGPDSGFTRRLKQAGFAVEEVNTRANGKRGARHVIWIATAAGRF
ECCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MIPWVHLDSAKTGDGAQELRLKRRGSEFSIMLGTNELMNSRLSGSEQALAKLSCQRIAGH
CCCEEECCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHCC
RQPRILIGGLGMGFTLRAALAELGKDAGIVVAELVPAVVVWARGPMAEVFGGCLDDPRVA
CCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEE
IQETDVGQLIRSGSAAWDAILLDVDNGPEGIVHKGNDALYSLAGLGAARTALKPGGVLAV
EEECCHHHHHHCCCCCEEEEEEECCCCCCCCEECCCHHHHHHHCCCHHHHHCCCCCEEEE
WSQGPDSGFTRRLKQAGFAVEEVNTRANGKRGARHVIWIATAAGRF
ECCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA