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The map label for this gene is yhjC [C]

Identifier: 13473045

GI number: 13473045

Start: 2845231

End: 2846133

Strand: Direct

Name: yhjC [C]

Synonym: mlr3528

Alternate gene names: 13473045

Gene position: 2845231-2846133 (Clockwise)

Preceding gene: 13473042

Following gene: 13473046

Centisome position: 40.44

GC content: 66.33

Gene sequence:

>903_bases
ATGGATCGTCTCGAAGCCATGTCACTCTTTGTCGCGGCGGTGGAGGCCGGCAGCCTTTCCGCCGCGGCCCGCCGTTTCGG
CATTCCGCTGGCGACCGTCAGCCGCAAGGTTTCCGATCTCGAACGCCATCTCAACACCCGGCTCCTGAACCGTTCGACGC
GGCGGCTGACGCCGACCGATGCAGGCGAGGCCTATCTTGCTGCCTGCCGCCGCATCCTCGATGACGTTGGCGAGGCTGAA
CGCGCCGCGGCAGGCGAATACAGCGCTCCGACCGGTGAACTGGCCATTACCGCGCCGGTCGTCTTCGGCCGCCTCCATGT
GTTGCCGGTCGTCACCGGCTTTCTTTCGGCCTATCCCGACGTGGATATCCGCCTGACCCTGGCGGACCGCATTACCCAAC
TGGTCGAGGACCATTTCGACCTCGCGCTGCGCATCGGCCAGTTGCCGGATTCGAGCCTGGTCGCCATTGGCGTCGGCTCG
ATCCGCCGCGTCGTCTGCGCCAGCCCGGCCTATCTGGCCGAACACGGCACGCTCACGATCCCGGAAGATCTAGGCACCCA
CGATTGCATCACCTTCGAGGGACTTTCCTCCGCCGCCCCGTGGAGCTTCACCAGAGGCAAGACGGACATCACGGTCCAGG
TCCGCTCGCGCCTGCAGGTCAACACCGCCGAGGCGGCGATCGATGCCGCGATTGCCGGCGTCGGGCTGACGAAAGTGCTT
TCCTATCAGGTCGATGCGGCCGTGCGGTCCGGCATGCTGCGCATCGTGCTGCAAGAGTTCGAGCCGGAACCGTGGCCGGT
GAGCCTGGTGCATGCGGGCCACGGCCTGCTGCCGGTCAAGCTGCGCGCCTTTCTCGACTTTGCCGCACCGCGTCTGAAGG
AGCGGCTGGCGCGATTGGAGTAG

Upstream 100 bases:

>100_bases
GCTATGCTGCGGACATGCCATGCCGGACATATAACCCCTTCCATTCCTGAAATGCAGATGGCATATCTGCAATCATTCCT
TCCATTTTCTGGAAGAAGTG

Downstream 100 bases:

>100_bases
CGTGCCTGTCCTGGCGGAAGCCGCGCTTCAGCATCGGCCGGAACACTGCCGCGCCATTTCCTTTTTCCCCGCGCTTGGTG
TAACCAACGCACACTTCCTC

Product: transcriptional regulator, GstR

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDRLEAMSLFVAAVEAGSLSAAARRFGIPLATVSRKVSDLERHLNTRLLNRSTRRLTPTDAGEAYLAACRRILDDVGEAE
RAAAGEYSAPTGELAITAPVVFGRLHVLPVVTGFLSAYPDVDIRLTLADRITQLVEDHFDLALRIGQLPDSSLVAIGVGS
IRRVVCASPAYLAEHGTLTIPEDLGTHDCITFEGLSSAAPWSFTRGKTDITVQVRSRLQVNTAEAAIDAAIAGVGLTKVL
SYQVDAAVRSGMLRIVLQEFEPEPWPVSLVHAGHGLLPVKLRAFLDFAAPRLKERLARLE

Sequences:

>Translated_300_residues
MDRLEAMSLFVAAVEAGSLSAAARRFGIPLATVSRKVSDLERHLNTRLLNRSTRRLTPTDAGEAYLAACRRILDDVGEAE
RAAAGEYSAPTGELAITAPVVFGRLHVLPVVTGFLSAYPDVDIRLTLADRITQLVEDHFDLALRIGQLPDSSLVAIGVGS
IRRVVCASPAYLAEHGTLTIPEDLGTHDCITFEGLSSAAPWSFTRGKTDITVQVRSRLQVNTAEAAIDAAIAGVGLTKVL
SYQVDAAVRSGMLRIVLQEFEPEPWPVSLVHAGHGLLPVKLRAFLDFAAPRLKERLARLE
>Mature_300_residues
MDRLEAMSLFVAAVEAGSLSAAARRFGIPLATVSRKVSDLERHLNTRLLNRSTRRLTPTDAGEAYLAACRRILDDVGEAE
RAAAGEYSAPTGELAITAPVVFGRLHVLPVVTGFLSAYPDVDIRLTLADRITQLVEDHFDLALRIGQLPDSSLVAIGVGS
IRRVVCASPAYLAEHGTLTIPEDLGTHDCITFEGLSSAAPWSFTRGKTDITVQVRSRLQVNTAEAAIDAAIAGVGLTKVL
SYQVDAAVRSGMLRIVLQEFEPEPWPVSLVHAGHGLLPVKLRAFLDFAAPRLKERLARLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693193, Length=298, Percent_Identity=31.2080536912752, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1786401, Length=293, Percent_Identity=32.7645051194539, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1789639, Length=291, Percent_Identity=29.8969072164948, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1787128, Length=281, Percent_Identity=27.0462633451957, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1789440, Length=301, Percent_Identity=29.2358803986711, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787589, Length=268, Percent_Identity=32.089552238806, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI87081978, Length=285, Percent_Identity=29.4736842105263, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1789173, Length=251, Percent_Identity=25.8964143426295, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786448, Length=250, Percent_Identity=25.6, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32353; Mature: 32353

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLEAMSLFVAAVEAGSLSAAARRFGIPLATVSRKVSDLERHLNTRLLNRSTRRLTPTD
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AGEAYLAACRRILDDVGEAERAAAGEYSAPTGELAITAPVVFGRLHVLPVVTGFLSAYPD
CCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
VDIRLTLADRITQLVEDHFDLALRIGQLPDSSLVAIGVGSIRRVVCASPAYLAEHGTLTI
CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCHHHHCCCCEEC
PEDLGTHDCITFEGLSSAAPWSFTRGKTDITVQVRSRLQVNTAEAAIDAAIAGVGLTKVL
CHHCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
SYQVDAAVRSGMLRIVLQEFEPEPWPVSLVHAGHGLLPVKLRAFLDFAAPRLKERLARLE
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRLEAMSLFVAAVEAGSLSAAARRFGIPLATVSRKVSDLERHLNTRLLNRSTRRLTPTD
CCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AGEAYLAACRRILDDVGEAERAAAGEYSAPTGELAITAPVVFGRLHVLPVVTGFLSAYPD
CCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCC
VDIRLTLADRITQLVEDHFDLALRIGQLPDSSLVAIGVGSIRRVVCASPAYLAEHGTLTI
CEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCCCHHHHCCCCEEC
PEDLGTHDCITFEGLSSAAPWSFTRGKTDITVQVRSRLQVNTAEAAIDAAIAGVGLTKVL
CHHCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
SYQVDAAVRSGMLRIVLQEFEPEPWPVSLVHAGHGLLPVKLRAFLDFAAPRLKERLARLE
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8635745; 7542800 [H]