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The map label for this gene is 13473010

Identifier: 13473010

GI number: 13473010

Start: 2810007

End: 2810588

Strand: Direct

Name: 13473010

Synonym: mlr3485

Alternate gene names: NA

Gene position: 2810007-2810588 (Clockwise)

Preceding gene: 13473009

Following gene: 13473011

Centisome position: 39.94

GC content: 64.43

Gene sequence:

>582_bases
GTGGTCAAGCTCAACAAGATCTACACCCGCACCGGCGATGACGGCACGACAGGTCTCGGCACTGGTGAGCGGCGGCTGAA
ATCCGACCTGCGGGTGGACGCCTACGGCACGGTCGACGAAGCCAATGCCTGCATCGGCATGGCGCGCGTGCACACGGCAG
CCAACCACCCGGCGATCGATGCCATGCTGTCGCGCATCCAGAACGATCTCTTCGACCTCGGCGCCGATCTCGCCGTGCCC
GATGACGGCAAGACGCTTGACTATGAGCCACTGCGCATCGTTGCCGCGCAGACCGACCGCGTCGAGAAGGACATCGACCT
CCTCAACAAGGATCTCCAGCCGCTCAAATCCTTCGTGCTCAACGGTGGCACGCCGGCGGCCGCGGCGCTGCATCTGGCCC
GCACGGTAGCGCGGCGGGCCGAACGGCTGATGGTGGCGCTGGCTCAAGACCCGGGCGAGCACGTCAACCGTGAGGGGTTG
AAATACATAAACCGCGTCTCGGATTTCCTGTTTGTCGCCGCCCGGGCGGTCAATGACAACGGAAATGCCGACGTGCTATG
GGTTCCCGGCAAGAACCGCTGA

Upstream 100 bases:

>100_bases
AAGCTGATGCAGGCACGCGTCATGCTGCAGGCCGTGGCGCTGGTGCTGATCCTGCTGGCCGTGTATTTCACCCGCAAGTG
AGGGCCGTTCGGGAGGCGAT

Downstream 100 bases:

>100_bases
GCTGAACGGATCGAAAAGGCGGGAGGGGACCAGGCACGCATGTTCATCCCGCTTTACGACACAAACAGGCTGCGCCACAT
CCGCCTGCAATATGTGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MVKLNKIYTRTGDDGTTGLGTGERRLKSDLRVDAYGTVDEANACIGMARVHTAANHPAIDAMLSRIQNDLFDLGADLAVP
DDGKTLDYEPLRIVAAQTDRVEKDIDLLNKDLQPLKSFVLNGGTPAAAALHLARTVARRAERLMVALAQDPGEHVNREGL
KYINRVSDFLFVAARAVNDNGNADVLWVPGKNR

Sequences:

>Translated_193_residues
MVKLNKIYTRTGDDGTTGLGTGERRLKSDLRVDAYGTVDEANACIGMARVHTAANHPAIDAMLSRIQNDLFDLGADLAVP
DDGKTLDYEPLRIVAAQTDRVEKDIDLLNKDLQPLKSFVLNGGTPAAAALHLARTVARRAERLMVALAQDPGEHVNREGL
KYINRVSDFLFVAARAVNDNGNADVLWVPGKNR
>Mature_193_residues
MVKLNKIYTRTGDDGTTGLGTGERRLKSDLRVDAYGTVDEANACIGMARVHTAANHPAIDAMLSRIQNDLFDLGADLAVP
DDGKTLDYEPLRIVAAQTDRVEKDIDLLNKDLQPLKSFVLNGGTPAAAALHLARTVARRAERLMVALAQDPGEHVNREGL
KYINRVSDFLFVAARAVNDNGNADVLWVPGKNR

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=190, Percent_Identity=36.8421052631579, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI115534154, Length=182, Percent_Identity=32.967032967033, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 21003; Mature: 21003

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLNKIYTRTGDDGTTGLGTGERRLKSDLRVDAYGTVDEANACIGMARVHTAANHPAID
CCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
AMLSRIQNDLFDLGADLAVPDDGKTLDYEPLRIVAAQTDRVEKDIDLLNKDLQPLKSFVL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
NGGTPAAAALHLARTVARRAERLMVALAQDPGEHVNREGLKYINRVSDFLFVAARAVNDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCC
GNADVLWVPGKNR
CCEEEEECCCCCC
>Mature Secondary Structure
MVKLNKIYTRTGDDGTTGLGTGERRLKSDLRVDAYGTVDEANACIGMARVHTAANHPAID
CCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
AMLSRIQNDLFDLGADLAVPDDGKTLDYEPLRIVAAQTDRVEKDIDLLNKDLQPLKSFVL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
NGGTPAAAALHLARTVARRAERLMVALAQDPGEHVNREGLKYINRVSDFLFVAARAVNDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCC
GNADVLWVPGKNR
CCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]