| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472986
Identifier: 13472986
GI number: 13472986
Start: 2786353
End: 2787372
Strand: Direct
Name: 13472986
Synonym: mlr3455
Alternate gene names: NA
Gene position: 2786353-2787372 (Clockwise)
Preceding gene: 13472981
Following gene: 13472992
Centisome position: 39.6
GC content: 66.08
Gene sequence:
>1020_bases ATGCGCGCCGGCCAGCCGAGAGCCGATCGGGCGAGGTTCCTGATCCCGACGGACTTGATCTCTGGCATCGGATCGGCCAC GTGGTTGTTCTCCGCACCGAGTGTACCAAGTATATCAGGGCGTGGACAAACAAGGATCCACCCGTTGCAGCCCATTATGG ATACCTCTTTGTGGCTGGCGCACAAGCGGCGCGCGGTCAGCCATCCGGTCGACGGCGCCGATTTCCTGATGAACCGCGCC GCCGAGGACCTTGCAGACCGGCTGGGCGCCGTCGAGCGCCGGTTCGGCAAGGCGGCGGTGCTGTTTTGCCAGACGTCGGC CGCGGCCGATGTGCTCGCCGCCAGCGGCAAGGTCGCGGATATCGTCCGCGTCGAGGCGGATACGGCTTTCCTGACCGGCG GCGGCGCCGGCTTAATCGCACCGTTCGAAACCGTGCCGTTCGAGCCGGAGAGCCTCGATCTGGCGGTGTCGCTTCTGTCG ATGCAGGCGATGAACGACATTCCCGGCATGCTGATCCAGATCCGCCGCGCGCTGCGGCCGGACGGACTTTTCCTTGGCGC CTTTGCCGGTGCCGGCACGCTTTTCGAGTTGCGCGAAAGCCTGCTTGCGGCCGAGACGGAACTTTACGGCGGCGCCAGCC CGCGTGTCATCCCGTTCACCGACGTGCGCGATGCCGGCGCGCTTTTGCAGCGCGCCGCCCTTGCCCTGCCGGTCGCCGAT GTCGAGACCGTGACGGTGCGCTATGCCAATTTGTTTGCGTTGATGGCCGATCTGCGCGCCATGGGCGAAACCAGCGCACT CACCGACCGCAGCCGACGGCCGGGCGCACGCCAGCTGTTTGCCCGCGCGGCCGAAATTTACGCCGAGCGGTTTTCCGACG CCGACGGCCGCGTAAGGGCAAGTTTCTCGATTGTCTGGATGTCCGGCTGGGCGCCCGACGCCTCGCAGCAAAAACCGCTG AAGCCAGGGTCGGCCAAGGTCTCGCTGAAGACGATACTTGAGGCTCCCGACGGGCAATGA
Upstream 100 bases:
>100_bases GGGCCGTTCCAAGAGCCGCAGCTTCGGCCAGCAGGCGCCGCACAGCACGCCGGGCTGCGAGACATGCCGGCGGCAACCGG CACAGACTGGCGGAAACAGC
Downstream 100 bases:
>100_bases TCGGCGTCAGGCGCCGACAGCCAGATCAGGGTGCGAAGGCGTTCGCAAGCCGGCTGCCATTGTCGCTGAACAGCCAGGTG ATCGAGTTGAAGACCTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRAGQPRADRARFLIPTDLISGIGSATWLFSAPSVPSISGRGQTRIHPLQPIMDTSLWLAHKRRAVSHPVDGADFLMNRA AEDLADRLGAVERRFGKAAVLFCQTSAAADVLAASGKVADIVRVEADTAFLTGGGAGLIAPFETVPFEPESLDLAVSLLS MQAMNDIPGMLIQIRRALRPDGLFLGAFAGAGTLFELRESLLAAETELYGGASPRVIPFTDVRDAGALLQRAALALPVAD VETVTVRYANLFALMADLRAMGETSALTDRSRRPGARQLFARAAEIYAERFSDADGRVRASFSIVWMSGWAPDASQQKPL KPGSAKVSLKTILEAPDGQ
Sequences:
>Translated_339_residues MRAGQPRADRARFLIPTDLISGIGSATWLFSAPSVPSISGRGQTRIHPLQPIMDTSLWLAHKRRAVSHPVDGADFLMNRA AEDLADRLGAVERRFGKAAVLFCQTSAAADVLAASGKVADIVRVEADTAFLTGGGAGLIAPFETVPFEPESLDLAVSLLS MQAMNDIPGMLIQIRRALRPDGLFLGAFAGAGTLFELRESLLAAETELYGGASPRVIPFTDVRDAGALLQRAALALPVAD VETVTVRYANLFALMADLRAMGETSALTDRSRRPGARQLFARAAEIYAERFSDADGRVRASFSIVWMSGWAPDASQQKPL KPGSAKVSLKTILEAPDGQ >Mature_339_residues MRAGQPRADRARFLIPTDLISGIGSATWLFSAPSVPSISGRGQTRIHPLQPIMDTSLWLAHKRRAVSHPVDGADFLMNRA AEDLADRLGAVERRFGKAAVLFCQTSAAADVLAASGKVADIVRVEADTAFLTGGGAGLIAPFETVPFEPESLDLAVSLLS MQAMNDIPGMLIQIRRALRPDGLFLGAFAGAGTLFELRESLLAAETELYGGASPRVIPFTDVRDAGALLQRAALALPVAD VETVTVRYANLFALMADLRAMGETSALTDRSRRPGARQLFARAAEIYAERFSDADGRVRASFSIVWMSGWAPDASQQKPL KPGSAKVSLKTILEAPDGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40018642, Length=301, Percent_Identity=37.2093023255814, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI86792933, Length=301, Percent_Identity=34.21926910299, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17535003, Length=194, Percent_Identity=37.1134020618557, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI19922210, Length=281, Percent_Identity=34.8754448398576, Blast_Score=167, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 36186; Mature: 36186
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGQPRADRARFLIPTDLISGIGSATWLFSAPSVPSISGRGQTRIHPLQPIMDTSLWLA CCCCCCCCCCCEEEECHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH HKRRAVSHPVDGADFLMNRAAEDLADRLGAVERRFGKAAVLFCQTSAAADVLAASGKVAD HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEEE IVRVEADTAFLTGGGAGLIAPFETVPFEPESLDLAVSLLSMQAMNDIPGMLIQIRRALRP EEEEECCEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC DGLFLGAFAGAGTLFELRESLLAAETELYGGASPRVIPFTDVRDAGALLQRAALALPVAD CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCC VETVTVRYANLFALMADLRAMGETSALTDRSRRPGARQLFARAAEIYAERFSDADGRVRA CCEEHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE SFSIVWMSGWAPDASQQKPLKPGSAKVSLKTILEAPDGQ EEEEEEEECCCCCCCCCCCCCCCCCEEEHEEEECCCCCC >Mature Secondary Structure MRAGQPRADRARFLIPTDLISGIGSATWLFSAPSVPSISGRGQTRIHPLQPIMDTSLWLA CCCCCCCCCCCEEEECHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH HKRRAVSHPVDGADFLMNRAAEDLADRLGAVERRFGKAAVLFCQTSAAADVLAASGKVAD HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCEEE IVRVEADTAFLTGGGAGLIAPFETVPFEPESLDLAVSLLSMQAMNDIPGMLIQIRRALRP EEEEECCEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC DGLFLGAFAGAGTLFELRESLLAAETELYGGASPRVIPFTDVRDAGALLQRAALALPVAD CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCC VETVTVRYANLFALMADLRAMGETSALTDRSRRPGARQLFARAAEIYAERFSDADGRVRA CCEEHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE SFSIVWMSGWAPDASQQKPLKPGSAKVSLKTILEAPDGQ EEEEEEEECCCCCCCCCCCCCCCCCEEEHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]