| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472959
Identifier: 13472959
GI number: 13472959
Start: 2752085
End: 2752369
Strand: Reverse
Name: 13472959
Synonym: msl3420
Alternate gene names: NA
Gene position: 2752369-2752085 (Counterclockwise)
Preceding gene: 13472960
Following gene: 13472957
Centisome position: 39.12
GC content: 62.11
Gene sequence:
>285_bases ATGACGGAGGCCGAGCTCGAACAACTCTATGACGACATAGCCGAGCGCGCGTCGCCGGCGATCGCCTGGAATTTTGTTGT CGGCATCCGCGACCATTGCCTGGGTCTATCGACTTTTCCACAGCGCGGCACGGTGCGGGTCGAGATCATGCCCGGGGTGC GGATTGTTGGTTATCGCCGCGCCGTCAGCATCGCTTTCGCGGTCGAGGGCGAACGGGTGTTGATCCTGGCCATCTTTTGC GCCGGGCGGAACATCACGCCGGAATTGCTGGAAGACCGGCTCTGA
Upstream 100 bases:
>100_bases GATTCCCGCCGATACGATGTTTTCCCGGCTGGAGGCGCGCCATCGCGCGAAGCAGGCGAAAGCCAAGTAGGGGATCGAGT ACCGGATTGTCTTCCATCCC
Downstream 100 bases:
>100_bases AACGTTGGCTACGCTGGCACGGCGATCGACATCCACCAGACGGGATTGGCGATTTCAGGCCGGTGCCGGGTGTCTGGCGC CGAGGTAATAGTGAGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Plasmid Stabilization System Protein; Xin Of A Toxin/Antitoxin System
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTEAELEQLYDDIAERASPAIAWNFVVGIRDHCLGLSTFPQRGTVRVEIMPGVRIVGYRRAVSIAFAVEGERVLILAIFC AGRNITPELLEDRL
Sequences:
>Translated_94_residues MTEAELEQLYDDIAERASPAIAWNFVVGIRDHCLGLSTFPQRGTVRVEIMPGVRIVGYRRAVSIAFAVEGERVLILAIFC AGRNITPELLEDRL >Mature_93_residues TEAELEQLYDDIAERASPAIAWNFVVGIRDHCLGLSTFPQRGTVRVEIMPGVRIVGYRRAVSIAFAVEGERVLILAIFCA GRNITPELLEDRL
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10487; Mature: 10356
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAELEQLYDDIAERASPAIAWNFVVGIRDHCLGLSTFPQRGTVRVEIMPGVRIVGYRR CCHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHCCCCCCCCCCCEEEEEECCEEEEEEHH AVSIAFAVEGERVLILAIFCAGRNITPELLEDRL EEEEEEEECCCEEEEEEEEECCCCCCHHHHCCCC >Mature Secondary Structure TEAELEQLYDDIAERASPAIAWNFVVGIRDHCLGLSTFPQRGTVRVEIMPGVRIVGYRR CHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHCCCCCCCCCCCEEEEEECCEEEEEEHH AVSIAFAVEGERVLILAIFCAGRNITPELLEDRL EEEEEEEECCCEEEEEEEEECCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA